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ATCC64974_92400-T1, ATCC64974_92400-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_92400-T1
Unique NameATCC64974_92400-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1740490..1741598-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_92400-T1 ID=ATCC64974_92400-T1|Name=ATCC64974_92400-T1|organism=Aspergillus niger N402|type=mRNA|length=1109bp|location=Sequence derived from alignment at OGUI01000016.1:1740490..1741598- (Aspergillus niger N402)
ATGGCTTCAAGATTCTCGGCGCAATTGCTAGTGCCTTTGGCGCGGTCGTC
CGTTCGTTGTCGGGCTGCATCCACTCCCGTCTTCTCGGTTCTCGCCGGCC
GACATGCCATCGCCACTCCTTCACCAACAGAGCTTCAGAAGCGGTATAGC
TCTCATTCTCCGCTGGGGGCCGCCTCGGCCAATCCCCGAAAGAAGGTGAC
CATGCAGACGTTACGGAATCTTTACAAGAAAGGGGAGCCAATTACGATGC
TTACGGCGCATGACTTCCCCAGTGGCCATGTCGCGGAAATGGCGGGGATG
GACGTGGTCCTGGTCGGTGACAGCTTGGCCATGGTTGCCCTCGGCATGGA
GGATACAAGTGAGATCCTTATGGATGAGATGTTGTTGCATTGTCGGAGTG
TCGCGCGTGCTGTCAAGAGTGCATTCACGGTTCGTATTCTTACCGTCCTT
CTTGAGTTTGTCGAGATTAACGTGTGATTTCGGCGCAGGTCGCAGATCTC
CCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGTTCAGTCTGCCAT
CCGCATCGTGAAGGAGGGTCGCGTTCAGGCTATCAAGCTCGAGGGTGGTG
CTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCCGGTATCCCTGTT
TGTGGTCACATCGGGCTTACGCCTCAACGTCAACACGCTCTTGGAGGGTT
CAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGCTGTTGAAAGATG
CCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTTCTGGAAGCCGTG
CCTGCTGAGATTGCCGCCCTCATTACGAAGAAGTTGCGTATCCCCACGAT
TGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCCTGGTTCAAATTG
ATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCCAAATTCGTCAAG
AAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAATTCAACAATACCG
TGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAATACACCTACCCTA
TTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATTGAGCACTTCGGC
AAGGACTAA
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Coding sequence (CDS) from alignment at OGUI01000016.1:1740490..1741598-

>ATCC64974_92400-T1 ID=ATCC64974_92400-T1|Name=ATCC64974_92400-T1|organism=Aspergillus niger N402|type=CDS|length=2100bp|location=Sequence derived from alignment at OGUI01000016.1:1740490..1741598- (Aspergillus niger N402)
GTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGT
TCAGTCTGCCATCCGCATCGTGAAGGAGGGTCGCGTTCAGGCTATCAAGC
TCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCC
GGTATCCCTGTTTGTGGTCACATCGGGCTTACGCCTCAACGTCAACACGC
TCTTGGAGGGTTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGC
TGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTT
CTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACGAAGAAGTTGCG
TATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCC
TGGTTCAAATTGATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCC
AAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAAT
TCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAAT
ACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATT
GAGCACTTCGGCAAGGACTAAATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGTTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGAAAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGCTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTTATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG
GTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGT
TCAGTCTGCCATCCGCATCGTGAAGGAGGGTCGCGTTCAGGCTATCAAGC
TCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCC
GGTATCCCTGTTTGTGGTCACATCGGGCTTACGCCTCAACGTCAACACGC
TCTTGGAGGGTTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGC
TGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTT
CTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACGAAGAAGTTGCG
TATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCC
TGGTTCAAATTGATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCC
AAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAAT
TCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAAT
ACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATT
GAGCACTTCGGCAAGGACTAAATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGTTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGAAAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGCTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTTATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015940pantothenate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00038643-methyl-2-oxobutanoate hydroxymethyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_92400ATCC64974_92400Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92400-T1ATCC64974_92400-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92400-T1.cdsATCC64974_92400-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92400-T1.exon2ATCC64974_92400-T1.exon2Aspergillus niger N402exon
ATCC64974_92400-T1.exon1ATCC64974_92400-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09263FTE
DBxrefInterPro:IPR015813
DBxrefInterPro:IPR040442
DBxrefInterPro:IPR003700
DBxrefPFAM:PF02548
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1740490..1741598 -
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