|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000016.1:1869958..1872134- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_92820-T1 ID=ATCC64974_92820-T1|Name=ATCC64974_92820-T1|organism=Aspergillus niger N402|type=mRNA|length=2177bp|location=Sequence derived from alignment at OGUI01000016.1:1869958..1872134- (Aspergillus niger N402)
ATGCCTTCTCTGCGGCGGCGCAACGGTCGCAGGGCTGCCTGTGAGGCCTG
TCGCAGACGGAAACTAGCTTGTGACCACAATCAGCCGACATGTCATCGAT
GCCAGAAGCATTCACTCGAATGTATCTACCTGTCACAGTCGAACAGAACA
AAATGCGGGGTCTCGGAGGGAGCTTCACAATCACTTGCAGGATCAGGTGC
CTCCTTTCCTGAGGTGCATGCGACATCCGCAGAGAACCACCGGGTTGCGG
ACCGGAGCACGCCCCTAATCGACAGCCCGAACGAGTACCTGGGACCGACG
AGCTTTACCTCAGTCTTTGTGGAGCATGGTGATTGTTTTGAGTTGGAGGA
CACGAACAGAACTTCAGAAATAAGACGAGACTCGGCTCCAGACCCCCAAG
TAGACACACCACTTGTGCAGCTCGGCGCCCGTATTCTGAGCCAGTTACCG
GAGGAGCGCGACTGCTCCACACTCTTCTCGAGCCACATCAATCCCAATGA
TGGCTGGATCCGACTGGCAGGGCGTCACGCATTGGACAGAATGTGGGACG
CTTTCCGTCCGGCGCTACGACGACGGTTGGAAGAAGACATGCTGGAAACT
GCTACGATTCTCACGCGGAATAGCAAAACCCCGCTACAAAAGAAACAGGA
TCCGCAGGCCTGGCTGACCTCCTTTACAGGGACACAGATGCGATGGGAAA
CTATTGGCATCCTGTATACCTACTGGGCTTGCGGAGCAATCTCCTCGTCG
TCGGAGAGTCAAGCTGTCGCCCGGTATTGCCAGGGACATCCATATGTTAC
GAACACCAAGCAATTGATGGCTCGTTTCAAACACTGTGCGTTTTTATGCA
TCGATCTATGCAAGCAGCTTGGCTCCGTCAATCTTCTCTTTGTGTATCTG
TTGTACAAGCATAATATTTTGGAAGGGATCTTGAGCGGGGACAAGAGTAG
GTCATATTACTGACCAAATATGCCTCTGGTCTAACCGAACGAAGGTTTCT
CCCACTGGACACAGCACGGCGAGCTAGTGGCCGTGACCACTTCACTCGGA
CTTCATCGCGAACATTCAACAGAGACAGAAACTATTAGTCTCCAACACGA
ACTCAAGAGGAGGCTGTATGCCGCTGTTTTCAACATTGACAAGGTCATTT
CGACCTTCACTGGGCGACCGCCTCTTTTGAGTCAAGCATATTCATCTACC
AGACTGCCACTAGATCTGAGTGATGATGCCCTGCTATCTGGCAATCTCCC
ATCTGCCGCTGCGCAGCTAGACCCCAACGGATGGAACACAGACAACCAGA
TCTACTCTACTACAATTCTCCGATCCCGCACAAGCTTCGCCCGGGTCCGC
CATGAAATTTTGGAGCTTTTGGAAGGTTCGATGGATAATCTAGCTGATGG
ATCTGTCGATAAAGCCATGTACGTTACTCCAACCCACGCACATACTTTCT
AACACTAGTATCAGGAAACTAAAGCAACGAACCCATGATACTTACACGCA
ACTTCCATCAATAATTCAATTCTCGGAGTCAGAGCTCAGCAACACCAACG
TTCCCGGATATATCCTCTACGCGCAGATACTCACGCGTCTCGAATGTCTT
CTGAGTTTATTTTTGTTGGAACGGCTGTTGAAGCGACACCATATCGTCAC
CGAGCAAGACCTCGTCGAAGTGAGTCATGAAATGCTGGACTTGACCTTGA
TCTTCTGGAAGAAGAAAGACCGGTTTGTTGGTCTATACGCTGACTTCGAG
TGGCTGGTACGTATTGCGGATCCCCTGTGTGTGTGTGTGCAAAGTTGATT
ATCTCTAATACAACTATAAGACCATGTCATACGCTGTTCCAGCCAGCGGC
ATCCTCTGTCTGCAGTTGCTGCGACAAGCCACCCATCCGCATAGCTATCA
AACACGCCTCCCACGATCGGCAATAATTCAGAACCTTAGTCTGCTGGTAC
TGTGTCTGGACTGGATTGAGACTGAGGCCTCTTGCAGGAGCATGGTATCT
TTCATCCGAAGGATCTTAAGTCGATCTCTGGACCGGATATTGGATCCTGA
TCCGCTAGGGGCTGAGCAGCTGCAATCTGTCAGGTCGTTGCTAAATGATG
AGCTTCTGCAATATCCGCATTTAGAGCTGCTGAACACGTTTGGCTGGGTT
GATTGGGATGGGGGTGTTAGCGGTTGA back to topCoding sequence (CDS) from alignment at OGUI01000016.1:1869958..1872134- >ATCC64974_92820-T1 ID=ATCC64974_92820-T1|Name=ATCC64974_92820-T1|organism=Aspergillus niger N402|type=CDS|length=8076bp|location=Sequence derived from alignment at OGUI01000016.1:1869958..1872134- (Aspergillus niger N402)
ACCATGTCATACGCTGTTCCAGCCAGCGGCATCCTCTGTCTGCAGTTGCT
GCGACAAGCCACCCATCCGCATAGCTATCAAACACGCCTCCCACGATCGG
CAATAATTCAGAACCTTAGTCTGCTGGTACTGTGTCTGGACTGGATTGAG
ACTGAGGCCTCTTGCAGGAGCATGGTATCTTTCATCCGAAGGATCTTAAG
TCGATCTCTGGACCGGATATTGGATCCTGATCCGCTAGGGGCTGAGCAGC
TGCAATCTGTCAGGTCGTTGCTAAATGATGAGCTTCTGCAATATCCGCAT
TTAGAGCTGCTGAACACGTTTGGCTGGGTTGATTGGGATGGGGGTGTTAG
CGGTTGAGAAACTAAAGCAACGAACCCATGATACTTACACGCAACTTCCA
TCAATAATTCAATTCTCGGAGTCAGAGCTCAGCAACACCAACGTTCCCGG
ATATATCCTCTACGCGCAGATACTCACGCGTCTCGAATGTCTTCTGAGTT
TATTTTTGTTGGAACGGCTGTTGAAGCGACACCATATCGTCACCGAGCAA
GACCTCGTCGAAGTGAGTCATGAAATGCTGGACTTGACCTTGATCTTCTG
GAAGAAGAAAGACCGGTTTGTTGGTCTATACGCTGACTTCGAGTGGCTGG
TTTCTCCCACTGGACACAGCACGGCGAGCTAGTGGCCGTGACCACTTCAC
TCGGACTTCATCGCGAACATTCAACAGAGACAGAAACTATTAGTCTCCAA
CACGAACTCAAGAGGAGGCTGTATGCCGCTGTTTTCAACATTGACAAGGT
CATTTCGACCTTCACTGGGCGACCGCCTCTTTTGAGTCAAGCATATTCAT
CTACCAGACTGCCACTAGATCTGAGTGATGATGCCCTGCTATCTGGCAAT
CTCCCATCTGCCGCTGCGCAGCTAGACCCCAACGGATGGAACACAGACAA
CCAGATCTACTCTACTACAATTCTCCGATCCCGCACAAGCTTCGCCCGGG
TCCGCCATGAAATTTTGGAGCTTTTGGAAGGTTCGATGGATAATCTAGCT
GATGGATCTGTCGATAAAGCCATATGCCTTCTCTGCGGCGGCGCAACGGT
CGCAGGGCTGCCTGTGAGGCCTGTCGCAGACGGAAACTAGCTTGTGACCA
CAATCAGCCGACATGTCATCGATGCCAGAAGCATTCACTCGAATGTATCT
ACCTGTCACAGTCGAACAGAACAAAATGCGGGGTCTCGGAGGGAGCTTCA
CAATCACTTGCAGGATCAGGTGCCTCCTTTCCTGAGGTGCATGCGACATC
CGCAGAGAACCACCGGGTTGCGGACCGGAGCACGCCCCTAATCGACAGCC
CGAACGAGTACCTGGGACCGACGAGCTTTACCTCAGTCTTTGTGGAGCAT
GGTGATTGTTTTGAGTTGGAGGACACGAACAGAACTTCAGAAATAAGACG
AGACTCGGCTCCAGACCCCCAAGTAGACACACCACTTGTGCAGCTCGGCG
CCCGTATTCTGAGCCAGTTACCGGAGGAGCGCGACTGCTCCACACTCTTC
TCGAGCCACATCAATCCCAATGATGGCTGGATCCGACTGGCAGGGCGTCA
CGCATTGGACAGAATGTGGGACGCTTTCCGTCCGGCGCTACGACGACGGT
TGGAAGAAGACATGCTGGAAACTGCTACGATTCTCACGCGGAATAGCAAA
ACCCCGCTACAAAAGAAACAGGATCCGCAGGCCTGGCTGACCTCCTTTAC
AGGGACACAGATGCGATGGGAAACTATTGGCATCCTGTATACCTACTGGG
CTTGCGGAGCAATCTCCTCGTCGTCGGAGAGTCAAGCTGTCGCCCGGTAT
TGCCAGGGACATCCATATGTTACGAACACCAAGCAATTGATGGCTCGTTT
CAAACACTGTGCGTTTTTATGCATCGATCTATGCAAGCAGCTTGGCTCCG
TCAATCTTCTCTTTGTGTATCTGTTGTACAAGCATAATATTTTGGAAGGG
ATCTTGAGCGGGGACAAGAACCATGTCATACGCTGTTCCAGCCAGCGGCA
TCCTCTGTCTGCAGTTGCTGCGACAAGCCACCCATCCGCATAGCTATCAA
ACACGCCTCCCACGATCGGCAATAATTCAGAACCTTAGTCTGCTGGTACT
GTGTCTGGACTGGATTGAGACTGAGGCCTCTTGCAGGAGCATGGTATCTT
TCATCCGAAGGATCTTAAGTCGATCTCTGGACCGGATATTGGATCCTGAT
CCGCTAGGGGCTGAGCAGCTGCAATCTGTCAGGTCGTTGCTAAATGATGA
GCTTCTGCAATATCCGCATTTAGAGCTGCTGAACACGTTTGGCTGGGTTG
ATTGGGATGGGGGTGTTAGCGGTTGAGAAACTAAAGCAACGAACCCATGA
TACTTACACGCAACTTCCATCAATAATTCAATTCTCGGAGTCAGAGCTCA
GCAACACCAACGTTCCCGGATATATCCTCTACGCGCAGATACTCACGCGT
CTCGAATGTCTTCTGAGTTTATTTTTGTTGGAACGGCTGTTGAAGCGACA
CCATATCGTCACCGAGCAAGACCTCGTCGAAGTGAGTCATGAAATGCTGG
ACTTGACCTTGATCTTCTGGAAGAAGAAAGACCGGTTTGTTGGTCTATAC
GCTGACTTCGAGTGGCTGGTTTCTCCCACTGGACACAGCACGGCGAGCTA
GTGGCCGTGACCACTTCACTCGGACTTCATCGCGAACATTCAACAGAGAC
AGAAACTATTAGTCTCCAACACGAACTCAAGAGGAGGCTGTATGCCGCTG
TTTTCAACATTGACAAGGTCATTTCGACCTTCACTGGGCGACCGCCTCTT
TTGAGTCAAGCATATTCATCTACCAGACTGCCACTAGATCTGAGTGATGA
TGCCCTGCTATCTGGCAATCTCCCATCTGCCGCTGCGCAGCTAGACCCCA
ACGGATGGAACACAGACAACCAGATCTACTCTACTACAATTCTCCGATCC
CGCACAAGCTTCGCCCGGGTCCGCCATGAAATTTTGGAGCTTTTGGAAGG
TTCGATGGATAATCTAGCTGATGGATCTGTCGATAAAGCCATATGCCTTC
TCTGCGGCGGCGCAACGGTCGCAGGGCTGCCTGTGAGGCCTGTCGCAGAC
GGAAACTAGCTTGTGACCACAATCAGCCGACATGTCATCGATGCCAGAAG
CATTCACTCGAATGTATCTACCTGTCACAGTCGAACAGAACAAAATGCGG
GGTCTCGGAGGGAGCTTCACAATCACTTGCAGGATCAGGTGCCTCCTTTC
CTGAGGTGCATGCGACATCCGCAGAGAACCACCGGGTTGCGGACCGGAGC
ACGCCCCTAATCGACAGCCCGAACGAGTACCTGGGACCGACGAGCTTTAC
CTCAGTCTTTGTGGAGCATGGTGATTGTTTTGAGTTGGAGGACACGAACA
GAACTTCAGAAATAAGACGAGACTCGGCTCCAGACCCCCAAGTAGACACA
CCACTTGTGCAGCTCGGCGCCCGTATTCTGAGCCAGTTACCGGAGGAGCG
CGACTGCTCCACACTCTTCTCGAGCCACATCAATCCCAATGATGGCTGGA
TCCGACTGGCAGGGCGTCACGCATTGGACAGAATGTGGGACGCTTTCCGT
CCGGCGCTACGACGACGGTTGGAAGAAGACATGCTGGAAACTGCTACGAT
TCTCACGCGGAATAGCAAAACCCCGCTACAAAAGAAACAGGATCCGCAGG
CCTGGCTGACCTCCTTTACAGGGACACAGATGCGATGGGAAACTATTGGC
ATCCTGTATACCTACTGGGCTTGCGGAGCAATCTCCTCGTCGTCGGAGAG
TCAAGCTGTCGCCCGGTATTGCCAGGGACATCCATATGTTACGAACACCA
AGCAATTGATGGCTCGTTTCAAACACTGTGCGTTTTTATGCATCGATCTA
TGCAAGCAGCTTGGCTCCGTCAATCTTCTCTTTGTGTATCTGTTGTACAA
GCATAATATTTTGGAAGGGATCTTGAGCGGGGACAAGAACCATGTCATAC
GCTGTTCCAGCCAGCGGCATCCTCTGTCTGCAGTTGCTGCGACAAGCCAC
CCATCCGCATAGCTATCAAACACGCCTCCCACGATCGGCAATAATTCAGA
ACCTTAGTCTGCTGGTACTGTGTCTGGACTGGATTGAGACTGAGGCCTCT
TGCAGGAGCATGGTATCTTTCATCCGAAGGATCTTAAGTCGATCTCTGGA
CCGGATATTGGATCCTGATCCGCTAGGGGCTGAGCAGCTGCAATCTGTCA
GGTCGTTGCTAAATGATGAGCTTCTGCAATATCCGCATTTAGAGCTGCTG
AACACGTTTGGCTGGGTTGATTGGGATGGGGGTGTTAGCGGTTGAGAAAC
TAAAGCAACGAACCCATGATACTTACACGCAACTTCCATCAATAATTCAA
TTCTCGGAGTCAGAGCTCAGCAACACCAACGTTCCCGGATATATCCTCTA
CGCGCAGATACTCACGCGTCTCGAATGTCTTCTGAGTTTATTTTTGTTGG
AACGGCTGTTGAAGCGACACCATATCGTCACCGAGCAAGACCTCGTCGAA
GTGAGTCATGAAATGCTGGACTTGACCTTGATCTTCTGGAAGAAGAAAGA
CCGGTTTGTTGGTCTATACGCTGACTTCGAGTGGCTGGTTTCTCCCACTG
GACACAGCACGGCGAGCTAGTGGCCGTGACCACTTCACTCGGACTTCATC
GCGAACATTCAACAGAGACAGAAACTATTAGTCTCCAACACGAACTCAAG
AGGAGGCTGTATGCCGCTGTTTTCAACATTGACAAGGTCATTTCGACCTT
CACTGGGCGACCGCCTCTTTTGAGTCAAGCATATTCATCTACCAGACTGC
CACTAGATCTGAGTGATGATGCCCTGCTATCTGGCAATCTCCCATCTGCC
GCTGCGCAGCTAGACCCCAACGGATGGAACACAGACAACCAGATCTACTC
TACTACAATTCTCCGATCCCGCACAAGCTTCGCCCGGGTCCGCCATGAAA
TTTTGGAGCTTTTGGAAGGTTCGATGGATAATCTAGCTGATGGATCTGTC
GATAAAGCCATATGCCTTCTCTGCGGCGGCGCAACGGTCGCAGGGCTGCC
TGTGAGGCCTGTCGCAGACGGAAACTAGCTTGTGACCACAATCAGCCGAC
ATGTCATCGATGCCAGAAGCATTCACTCGAATGTATCTACCTGTCACAGT
CGAACAGAACAAAATGCGGGGTCTCGGAGGGAGCTTCACAATCACTTGCA
GGATCAGGTGCCTCCTTTCCTGAGGTGCATGCGACATCCGCAGAGAACCA
CCGGGTTGCGGACCGGAGCACGCCCCTAATCGACAGCCCGAACGAGTACC
TGGGACCGACGAGCTTTACCTCAGTCTTTGTGGAGCATGGTGATTGTTTT
GAGTTGGAGGACACGAACAGAACTTCAGAAATAAGACGAGACTCGGCTCC
AGACCCCCAAGTAGACACACCACTTGTGCAGCTCGGCGCCCGTATTCTGA
GCCAGTTACCGGAGGAGCGCGACTGCTCCACACTCTTCTCGAGCCACATC
AATCCCAATGATGGCTGGATCCGACTGGCAGGGCGTCACGCATTGGACAG
AATGTGGGACGCTTTCCGTCCGGCGCTACGACGACGGTTGGAAGAAGACA
TGCTGGAAACTGCTACGATTCTCACGCGGAATAGCAAAACCCCGCTACAA
AAGAAACAGGATCCGCAGGCCTGGCTGACCTCCTTTACAGGGACACAGAT
GCGATGGGAAACTATTGGCATCCTGTATACCTACTGGGCTTGCGGAGCAA
TCTCCTCGTCGTCGGAGAGTCAAGCTGTCGCCCGGTATTGCCAGGGACAT
CCATATGTTACGAACACCAAGCAATTGATGGCTCGTTTCAAACACTGTGC
GTTTTTATGCATCGATCTATGCAAGCAGCTTGGCTCCGTCAATCTTCTCT
TTGTGTATCTGTTGTACAAGCATAATATTTTGGAAGGGATCTTGAGCGGG
GACAAGAACCATGTCATACGCTGTTCCAGCCAGCGGCATCCTCTGTCTGC
AGTTGCTGCGACAAGCCACCCATCCGCATAGCTATCAAACACGCCTCCCA
CGATCGGCAATAATTCAGAACCTTAGTCTGCTGGTACTGTGTCTGGACTG
GATTGAGACTGAGGCCTCTTGCAGGAGCATGGTATCTTTCATCCGAAGGA
TCTTAAGTCGATCTCTGGACCGGATATTGGATCCTGATCCGCTAGGGGCT
GAGCAGCTGCAATCTGTCAGGTCGTTGCTAAATGATGAGCTTCTGCAATA
TCCGCATTTAGAGCTGCTGAACACGTTTGGCTGGGTTGATTGGGATGGGG
GTGTTAGCGGTTGAGAAACTAAAGCAACGAACCCATGATACTTACACGCA
ACTTCCATCAATAATTCAATTCTCGGAGTCAGAGCTCAGCAACACCAACG
TTCCCGGATATATCCTCTACGCGCAGATACTCACGCGTCTCGAATGTCTT
CTGAGTTTATTTTTGTTGGAACGGCTGTTGAAGCGACACCATATCGTCAC
CGAGCAAGACCTCGTCGAAGTGAGTCATGAAATGCTGGACTTGACCTTGA
TCTTCTGGAAGAAGAAAGACCGGTTTGTTGGTCTATACGCTGACTTCGAG
TGGCTGGTTTCTCCCACTGGACACAGCACGGCGAGCTAGTGGCCGTGACC
ACTTCACTCGGACTTCATCGCGAACATTCAACAGAGACAGAAACTATTAG
TCTCCAACACGAACTCAAGAGGAGGCTGTATGCCGCTGTTTTCAACATTG
ACAAGGTCATTTCGACCTTCACTGGGCGACCGCCTCTTTTGAGTCAAGCA
TATTCATCTACCAGACTGCCACTAGATCTGAGTGATGATGCCCTGCTATC
TGGCAATCTCCCATCTGCCGCTGCGCAGCTAGACCCCAACGGATGGAACA
CAGACAACCAGATCTACTCTACTACAATTCTCCGATCCCGCACAAGCTTC
GCCCGGGTCCGCCATGAAATTTTGGAGCTTTTGGAAGGTTCGATGGATAA
TCTAGCTGATGGATCTGTCGATAAAGCCATATGCCTTCTCTGCGGCGGCG
CAACGGTCGCAGGGCTGCCTGTGAGGCCTGTCGCAGACGGAAACTAGCTT
GTGACCACAATCAGCCGACATGTCATCGATGCCAGAAGCATTCACTCGAA
TGTATCTACCTGTCACAGTCGAACAGAACAAAATGCGGGGTCTCGGAGGG
AGCTTCACAATCACTTGCAGGATCAGGTGCCTCCTTTCCTGAGGTGCATG
CGACATCCGCAGAGAACCACCGGGTTGCGGACCGGAGCACGCCCCTAATC
GACAGCCCGAACGAGTACCTGGGACCGACGAGCTTTACCTCAGTCTTTGT
GGAGCATGGTGATTGTTTTGAGTTGGAGGACACGAACAGAACTTCAGAAA
TAAGACGAGACTCGGCTCCAGACCCCCAAGTAGACACACCACTTGTGCAG
CTCGGCGCCCGTATTCTGAGCCAGTTACCGGAGGAGCGCGACTGCTCCAC
ACTCTTCTCGAGCCACATCAATCCCAATGATGGCTGGATCCGACTGGCAG
GGCGTCACGCATTGGACAGAATGTGGGACGCTTTCCGTCCGGCGCTACGA
CGACGGTTGGAAGAAGACATGCTGGAAACTGCTACGATTCTCACGCGGAA
TAGCAAAACCCCGCTACAAAAGAAACAGGATCCGCAGGCCTGGCTGACCT
CCTTTACAGGGACACAGATGCGATGGGAAACTATTGGCATCCTGTATACC
TACTGGGCTTGCGGAGCAATCTCCTCGTCGTCGGAGAGTCAAGCTGTCGC
CCGGTATTGCCAGGGACATCCATATGTTACGAACACCAAGCAATTGATGG
CTCGTTTCAAACACTGTGCGTTTTTATGCATCGATCTATGCAAGCAGCTT
GGCTCCGTCAATCTTCTCTTTGTGTATCTGTTGTACAAGCATAATATTTT
GGAAGGGATCTTGAGCGGGGACAAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_92820-T1 | ATCC64974_92820-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000016.1 | supercontig | OGUI01000016.1:1869958..1872134 - |
|
