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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000016.1:2349381..2350056+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_94330-T1 ID=ATCC64974_94330-T1|Name=ATCC64974_94330-T1|organism=Aspergillus niger N402|type=mRNA|length=676bp|location=Sequence derived from alignment at OGUI01000016.1:2349381..2350056+ (Aspergillus niger N402)
ATGAGTACGTGCCAACGCGATATACCACCGCCCAGTCCGATCTATCGACG
AGAACAATATCCAGACTGACATACCGATTCTGTTTACAGCGAAGGGTACC
TCCAGCTTCGGAAAGCGCCACAACAAGACTCACACTCTTTGCCGGCGTTG
TGGTCAGTATTTTACACTACTCCGAAAATTTATATATATCCTCCGGGCGG
AAATTATTATATACGGGATATCTCTACAATCAACGGAACGGGAGAGAAGG
AACGGAATAATAAATGACTGCCGGGAGAGATATATATGAAGGTTATCGGG
AAACGACCAGATGGGCTAATACGTTCGGATTGAATTCAGGCCGCCGCTCC
TTCCACGTCCAGAAGTCGACTTGCTCCAACTGCGGTTACCCTGCCGCTAA
GACTCGCAAGTGTACGAATCCTTTTCCCCAAAATCCCACCATCGAAGAAC
AGCCGCTGGTTCCTTGAAACCTTGGATACGGATTGTATGAAAGTGTTTGG
ATGAACATATTGGCTTACGAAGTTCGTTTTATACAGTCAACTGGAGCGAG
AAGGCCAAGCGCAGAAAGACCACCGGCTCCGGCAGAATGCGTCACCTCAA
GGAGGTCCACCGCCGCTTCCACAACGGCTTCCAGGTCGGCACCCCCAAGG
GCGCTCGTGGTCCCGAGAACCACTAG back to topCoding sequence (CDS) from alignment at OGUI01000016.1:2349381..2350056+ >ATCC64974_94330-T1 ID=ATCC64974_94330-T1|Name=ATCC64974_94330-T1|organism=Aspergillus niger N402|type=CDS|length=1116bp|location=Sequence derived from alignment at OGUI01000016.1:2349381..2350056+ (Aspergillus niger N402)
ATGACGAAGGGTACCTCCAGCTTCGGAAAGCGCCACAACAAGACTCACAC
TCTTTGCCGGCGTTGTGGCCGCCGCTCCTTCCACGTCCAGAAGTCGACTT
GCTCCAACTGCGGTTACCCTGCCGCTAAGACTCGCAAGTTCAACTGGAGC
GAGAAGGCCAAGCGCAGAAAGACCACCGGCTCCGGCAGAATGCGTCACCT
CAAGGAGGTCCACCGCCGCTTCCACAACGGCTTCCAGGTCGGCACCCCCA
AGGGCGCTCGTGGTCCCGAGAACCACTAGATGACGAAGGGTACCTCCAGC
TTCGGAAAGCGCCACAACAAGACTCACACTCTTTGCCGGCGTTGTGGCCG
CCGCTCCTTCCACGTCCAGAAGTCGACTTGCTCCAACTGCGGTTACCCTG
CCGCTAAGACTCGCAAGTTCAACTGGAGCGAGAAGGCCAAGCGCAGAAAG
ACCACCGGCTCCGGCAGAATGCGTCACCTCAAGGAGGTCCACCGCCGCTT
CCACAACGGCTTCCAGGTCGGCACCCCCAAGGGCGCTCGTGGTCCCGAGA
ACCACTAGATGACGAAGGGTACCTCCAGCTTCGGAAAGCGCCACAACAAG
ACTCACACTCTTTGCCGGCGTTGTGGCCGCCGCTCCTTCCACGTCCAGAA
GTCGACTTGCTCCAACTGCGGTTACCCTGCCGCTAAGACTCGCAAGTTCA
ACTGGAGCGAGAAGGCCAAGCGCAGAAAGACCACCGGCTCCGGCAGAATG
CGTCACCTCAAGGAGGTCCACCGCCGCTTCCACAACGGCTTCCAGGTCGG
CACCCCCAAGGGCGCTCGTGGTCCCGAGAACCACTAGATGACGAAGGGTA
CCTCCAGCTTCGGAAAGCGCCACAACAAGACTCACACTCTTTGCCGGCGT
TGTGGCCGCCGCTCCTTCCACGTCCAGAAGTCGACTTGCTCCAACTGCGG
TTACCCTGCCGCTAAGACTCGCAAGTTCAACTGGAGCGAGAAGGCCAAGC
GCAGAAAGACCACCGGCTCCGGCAGAATGCGTCACCTCAAGGAGGTCCAC
CGCCGCTTCCACAACGGCTTCCAGGTCGGCACCCCCAAGGGCGCTCGTGG
TCCCGAGAACCACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_94330-T1 | ATCC64974_94330-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011332 |
| DBxref | InterPro:IPR018267 |
| DBxref | InterPro:IPR001569 |
| DBxref | InterPro:IPR011331 |
| DBxref | PFAM:PF01907 |
| Product | 60S ribosomal protein L37 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000016.1 | supercontig | OGUI01000016.1:2349381..2350056 + |
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