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ATCC64974_94830-T1, ATCC64974_94830-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_94830-T1
Unique NameATCC64974_94830-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2481383..2482344-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_94830-T1 ID=ATCC64974_94830-T1|Name=ATCC64974_94830-T1|organism=Aspergillus niger N402|type=mRNA|length=962bp|location=Sequence derived from alignment at OGUI01000016.1:2481383..2482344- (Aspergillus niger N402)
ATGGCCACTGGTCCAGCTACTCAATCCCTCAAGGTCAGCATCATCCACCT
GCGTGTCCGTCTGTCAGATTGCGGCTAACGGAGCGCTGGTGCACACAGTG
TGTGGTGACGGGTGATGGTGCGGTAGGAAAAGTATGTTGCTCCCCTTTCA
GCCAGCTCGACCTCTCTCTCCCTCCCCCTCCCTCCCCCCTCTCGCTTCCT
AGATCGGTCGATTTCGTTATCGCTGTTGCTAATCGAACGATAGACATGTC
TCCTGATTTCGTACACGACCAACGCTTTCCCCGGCGAATATATCCCTACC
GTGTCCGTACCCCCCTTGGACCCTGATACTCCTCGTCTGATGCGGACCTC
GTGTGTTGACCGGATTCCCGCAGATTTGATAACTACACCGCTAGTGTCAT
GGTAGATGGCCGACCGATTAGCTTGGGACTCTGGGATACTGCTGGACAGG
AAGATTACGACCGTCTTCGCCCATTGTCCTACCCGCAAACCGACGTCTTC
CTGATCTGCTTCTCCATCGTTAGCCCGCCGTCCTTTGACAACGTTAAAGC
CAAGGTGCTTCCTTCACCATCCCTATCGACCGGAGACCCGCTTACTGACC
CTGACGGATGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCC
CCATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACC
ATAGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGC
TCTGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGG
CCCTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGGTAT
GTTCGAACAAACCCATATACTACTGGAATTGGGGGACTAACGTTCACATA
GCGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGC
GTGATTCTGTAG
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Coding sequence (CDS) from alignment at OGUI01000016.1:2481383..2482344-

>ATCC64974_94830-T1 ID=ATCC64974_94830-T1|Name=ATCC64974_94830-T1|organism=Aspergillus niger N402|type=CDS|length=3600bp|location=Sequence derived from alignment at OGUI01000016.1:2481383..2482344- (Aspergillus niger N402)
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAC1ATCC64974_94830Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94830-T1ATCC64974_94830-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94830-T1.cdsATCC64974_94830-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94830-T1.exon6ATCC64974_94830-T1.exon6Aspergillus niger N402exon
ATCC64974_94830-T1.exon5ATCC64974_94830-T1.exon5Aspergillus niger N402exon
ATCC64974_94830-T1.exon4ATCC64974_94830-T1.exon4Aspergillus niger N402exon
ATCC64974_94830-T1.exon3ATCC64974_94830-T1.exon3Aspergillus niger N402exon
ATCC64974_94830-T1.exon2ATCC64974_94830-T1.exon2Aspergillus niger N402exon
ATCC64974_94830-T1.exon1ATCC64974_94830-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductRho GTPase protein rac1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2481383..2482344 -
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