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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:156533..157417+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_96290-T1 ID=ATCC64974_96290-T1|Name=ATCC64974_96290-T1|organism=Aspergillus niger N402|type=mRNA|length=885bp|location=Sequence derived from alignment at OGUI01000017.1:156533..157417+ (Aspergillus niger N402)
ATGGCTCTTTCGCAGGTTCCAAGTCTAGTGCACGGAAGACTGCCTTCTTC
CTTGGAGGAACCAGACGAGGAGGGAATCTGGACTCCCCTCCAGCTGGCCG
CCGCACAAGGCAACCTACCCGAAGTGAAGGCTCTTTTGTCTCAGCCATCA
AGCAACCCCAACGAGCCTCCCAGAGGTTACTACGGCCAGACTGCACTCCA
GGCGGCCTCGCTCAACGGTCATCTTGATGTGGTCGAAACGCTCTTAGCCG
CTGGGGCCGATGTGAATGCTCCCGGGGGCAACAACGGCGGCCGAACCGCC
CTCACCCTCGCCGCAGGTGCCGGCCACTTCCAGATCGTTCGCCATCTAGT
CATCGCCGCAGGTGCGGACGTCAAGCAGCCAGCCCACAAATACGTGGGGC
GCACCGCCCTGCAGGCCGCTGCGGAGGGAGGCCATCTCGAGATCTTACAG
TGGCTGTTACAACACCAGCCGGTTACGGAAATCAACGCGCCCCCCGCGAA
CAACCGGGGTCGGACCGTGCTGCAGGCCGCAGCGTTTGGTGGCTATGATG
ACATGGTAGAGTTTTTACTTCATGTCGGTGCGGACGTGAATGCACCACCC
TGCAGATACCATGGCGTTACAGCGCTTCAGGGCGCGGCCTTCAACGGTCA
CCGCACCACCGTCCTTCGACTCTTGACGGCCGGGGCGGATGTGAACGCTC
CCGGGGGCCGGTACAATGGCTACACGGCGCTGGCAGCAGCAGCAGAAGGC
GGCCATGCGGACATTGTGCGACTCTTGTTGGACGCCGGCGCAGATGTCGC
CATGGTATCCGGAAATAAAAATTGGACAGCGTTGCGGTTTGCGGTGTGGC
GGGGACAGAAAGAGATCGTGCGGCTTTTGAACTAG back to topCoding sequence (CDS) from alignment at OGUI01000017.1:156533..157417+ >ATCC64974_96290-T1 ID=ATCC64974_96290-T1|Name=ATCC64974_96290-T1|organism=Aspergillus niger N402|type=CDS|length=885bp|location=Sequence derived from alignment at OGUI01000017.1:156533..157417+ (Aspergillus niger N402)
ATGGCTCTTTCGCAGGTTCCAAGTCTAGTGCACGGAAGACTGCCTTCTTC
CTTGGAGGAACCAGACGAGGAGGGAATCTGGACTCCCCTCCAGCTGGCCG
CCGCACAAGGCAACCTACCCGAAGTGAAGGCTCTTTTGTCTCAGCCATCA
AGCAACCCCAACGAGCCTCCCAGAGGTTACTACGGCCAGACTGCACTCCA
GGCGGCCTCGCTCAACGGTCATCTTGATGTGGTCGAAACGCTCTTAGCCG
CTGGGGCCGATGTGAATGCTCCCGGGGGCAACAACGGCGGCCGAACCGCC
CTCACCCTCGCCGCAGGTGCCGGCCACTTCCAGATCGTTCGCCATCTAGT
CATCGCCGCAGGTGCGGACGTCAAGCAGCCAGCCCACAAATACGTGGGGC
GCACCGCCCTGCAGGCCGCTGCGGAGGGAGGCCATCTCGAGATCTTACAG
TGGCTGTTACAACACCAGCCGGTTACGGAAATCAACGCGCCCCCCGCGAA
CAACCGGGGTCGGACCGTGCTGCAGGCCGCAGCGTTTGGTGGCTATGATG
ACATGGTAGAGTTTTTACTTCATGTCGGTGCGGACGTGAATGCACCACCC
TGCAGATACCATGGCGTTACAGCGCTTCAGGGCGCGGCCTTCAACGGTCA
CCGCACCACCGTCCTTCGACTCTTGACGGCCGGGGCGGATGTGAACGCTC
CCGGGGGCCGGTACAATGGCTACACGGCGCTGGCAGCAGCAGCAGAAGGC
GGCCATGCGGACATTGTGCGACTCTTGTTGGACGCCGGCGCAGATGTCGC
CATGGTATCCGGAAATAAAAATTGGACAGCGTTGCGGTTTGCGGTGTGGC
GGGGACAGAAAGAGATCGTGCGGCTTTTGAACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_96290-T1 | ATCC64974_96290-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:156533..157417 + |
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