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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:439941..441920+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_97250-T1 ID=ATCC64974_97250-T1|Name=ATCC64974_97250-T1|organism=Aspergillus niger N402|type=mRNA|length=1980bp|location=Sequence derived from alignment at OGUI01000017.1:439941..441920+ (Aspergillus niger N402)
ATGCTGACCTCCCCATTGGATGCATCTCCTTTCAAAATCATGGAGAGCTC
CACACTTGACTCCGATCTTCCACCCTTCGATATCAACATATCTTCCGGAA
TTCCAATATCTACCGGTGCAGTGGAAACGGAGGAAGAAACCGATCCCAGT
ACAGCTACGCGCTTGTGAGACGTGTAGCCAACGCGACAGCTAACATGACC
TCGTCCAGCAGGCGAGATCACTCATATTTACCCCGGAGCAGACCTCGTGC
CCTTAGACGTCTTCCCGTCTTCTCTTCCACGACGGCTCGTGAGGCTGGCA
CTATCTTATCGTAAGCTTCTTTGTCGCGCAGGACAGTTTTACCAAGCTCA
CTGCACTAGGATTTGCGATCATGACGCCTCGTGTACTTCCATCGCGCAAT
GTGTCTAATCCGTATCTCCAATACTGGTTTCCTATGTCACTGAACGACCA
GGCGACATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAGCGGATTA
ATGGTTTGATCTCAGCAAACATGGCTAGCCTGACATCGACCAAAGAGGTC
GTACCGTATTTGAAACAATACTACTTGGATACGATAACTTCGATCAATGA
AGCACTACACGATTCTGCTCGAGCAACTGCTGATGCGACTATCTTGGCGG
TCTTGATGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGAATGGTCC
AAGCGGTCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGTTAGACGT
TCACAGTGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTCACAAGA
TTATATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGTCTTGCA
GCCGCCGCATTCTAGTAAGCCACGTCTCTCATCACCCACGATTAGAAACT
GAAAATCGCCTTAGCCGAGTACTAGTAAATTCGACACTACTGCTCTCCCC
TCCGCCGCTTCCTTTCGTCGCACTGTCTGGCCAGAACGCATCCGAGATAG
AAAATCACTTGCTCCTTGGCACCATGAACCTAGTCAATCGCTTAAACGTC
CTCAACAAACTCCCTCTCGAGTCGGAACTCCGACAAGTGATGCATGGACT
AAGAGCCTACACAGCAAATATCGACGACTATATTTCTGGACGCAGTCCAT
CCTACAGTCCCCAGGCAATGTGTGACCAGCGCAATTTAGTCCAGTATCAT
CTGATGAGCATAGGGCCCATTGCCGGCACAGGACTTGGGGCTATATCCGA
AGTCTGTCGACTAGCGACAATTATCTACAGCATCGGAGTGACATTTCCAC
TTTCTGGCGTCCGAGCTCCTTTTGGAACTCTGGCCATGACATTACAGTCT
GAGTTAGAAAAGAATGATCTTCTCAACAACTGGCCGATCCTGGAACATGG
CGATATCCTGTTTCTGTGGATCCTGATGGTGGGCGGTATAGCAGCTAGGG
ACAGTCCCGGAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGATTATGTTT
GTCTCAGAGAACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTACAGATGAT
ACTTTGGCTAGACATTGCTTGCGATATGGCGGGCAGAGACGTCTGGAGTG
AAGCCCACTCTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATCAGTCCCT
TTATCGCCTAGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCCACTGTCG
ATCAAAGAAGATTAAGTGCGATAAGGATGATCCTTGTCAGAATTGTGTCA
GAAGTGGGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCA
AGGGTGCACGTGTTCTCCATGCGACAGAAGCCGTGTGATCTGTGTCGACG
ACGGAGGGTGCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGCAAAGATG
GTGGCTTCAGATGCGTTTACAGAGAAGACCAATGGGTTGAAAGCTTGGAA
TTGAGATCCTCCCAGGCTGGTTGCAGTTAG back to topCoding sequence (CDS) from alignment at OGUI01000017.1:439941..441920+ >ATCC64974_97250-T1 ID=ATCC64974_97250-T1|Name=ATCC64974_97250-T1|organism=Aspergillus niger N402|type=CDS|length=7284bp|location=Sequence derived from alignment at OGUI01000017.1:439941..441920+ (Aspergillus niger N402)
ATGCTGACCTCCCCATTGGATGCATCTCCTTTCAAAATCATGGAGAGCTC
CACACTTGACTCCGATCTTCCACCCTTCGATATCAACATATCTTCCGGAA
TTCCAATATCTACCGGTGCAGTGGAAACGGAGGAAGAAACCGATCCCACA
GGCGAGATCACTCATATTTACCCCGGAGCAGACCTCGTGCCCTTAGACGT
CTTCCCGTCTTCTCTTCCACGACGGCTCGTGAGGCTGGCACTATCTTATC
GATTTGCGATCATGACGCCTCGTGTACTTCCATCGCGCAATGTGTCTAAT
CCGTATCTCCAATACTGGTTTCCTATGTCACTGAACGACCAGGCGACATT
TAAGGCTATCGTACTATCCTCTCTATCTCATGAGCGGATTAATGGTTTGA
TCTCAGCAAACATGGCTAGCCTGACATCGACCAAAGAGGTCGTACCGTAT
TTGAAACAATACTACTTGGATACGATAACTTCGATCAATGAAGCACTACA
CGATTCTGCTCGAGCAACTGCTGATGCGACTATCTTGGCGGTCTTGATGA
TGGTCGAAAAGCCATTGCTTCAGGATCATAATGAATGGTCCAAGCGGTCT
CCATTCCAGGCACCTCTCCATGGATTACAGTGGTTAGACGTTCACAGTGC
TAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTCACAAGATTATATCCT
TGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGTCTTGCAGCCGCCGCA
TTCTACCGAGTACTAGTAAATTCGACACTACTGCTCTCCCCTCCGCCGCT
TCCTTTCGTCGCACTGTCTGGCCAGAACGCATCCGAGATAGAAAATCACT
TGCTCCTTGGCACCATGAACCTAGTCAATCGCTTAAACGTCCTCAACAAA
CTCCCTCTCGAGTCGGAACTCCGACAAGTGATGCATGGACTAAGAGCCTA
CACAGCAAATATCGACGACTATATTTCTGGACGCAGTCCATCCTACAGTC
CCCAGGCAATGTGTGACCAGCGCAATTTAGTCCAGTATCATCTGATGAGC
ATAGGGCCCATTGCCGGCACAGGACTTGGGGCTATATCCGAAGTCTGTCG
ACTAGCGACAATTATCTACAGCATCGGAGTGACATTTCCACTTTCTGGCG
TCCGAGCTCCTTTTGGAACTCTGGCCATGACATTACAGTCTGAGTTAGAA
AAGAATGATCTTCTCAACAACTGGCCGATCCTGGAACATGGCGATATCCT
GTTTCTGTGGATCCTGATGGTGGGCGGTATAGCAGCTAGGGACAGTCCCG
GAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGATTATGTTTGTCTCAGAG
AACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTACAGATGATACTTTGGCT
AGACATTGCTTGCGATATGGCGGGCAGAGACGTCTGGAGTGAAGCCCACT
CTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATCAGTCCCTTTATCGCCT
AGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCCACTGTCGATCAAAGAA
GATTAAGTGCGATAAGGATGATCCTTGTCAGAATTGTGTCAGAAGTGGGC
TGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCAAGGGTGCAC
GTGTTCTCCATGCGACAGAAGCCGTGTGATCTGTGTCGACGACGGAGGGT
GCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGCAAAGATGGTGGCTTCA
GATGCGTTTACAGAGAAGACCAATGGGTTGAAAGCTTGGAATTGAGATCC
TCCCAGGCTGGTTGCAGTTAGATGCTGACCTCCCCATTGGATGCATCTCC
TTTCAAAATCATGGAGAGCTCCACACTTGACTCCGATCTTCCACCCTTCG
ATATCAACATATCTTCCGGAATTCCAATATCTACCGGTGCAGTGGAAACG
GAGGAAGAAACCGATCCCACAGGCGAGATCACTCATATTTACCCCGGAGC
AGACCTCGTGCCCTTAGACGTCTTCCCGTCTTCTCTTCCACGACGGCTCG
TGAGGCTGGCACTATCTTATCGATTTGCGATCATGACGCCTCGTGTACTT
CCATCGCGCAATGTGTCTAATCCGTATCTCCAATACTGGTTTCCTATGTC
ACTGAACGACCAGGCGACATTTAAGGCTATCGTACTATCCTCTCTATCTC
ATGAGCGGATTAATGGTTTGATCTCAGCAAACATGGCTAGCCTGACATCG
ACCAAAGAGGTCGTACCGTATTTGAAACAATACTACTTGGATACGATAAC
TTCGATCAATGAAGCACTACACGATTCTGCTCGAGCAACTGCTGATGCGA
CTATCTTGGCGGTCTTGATGATGGTCGAAAAGCCATTGCTTCAGGATCAT
AATGAATGGTCCAAGCGGTCTCCATTCCAGGCACCTCTCCATGGATTACA
GTGGTTAGACGTTCACAGTGCTAGAGAGCCCAATCTGGTCCACCAGATGG
GTCTTCACAAGATTATATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACC
CCCGGTCTTGCAGCCGCCGCATTCTACCGAGTACTAGTAAATTCGACACT
ACTGCTCTCCCCTCCGCCGCTTCCTTTCGTCGCACTGTCTGGCCAGAACG
CATCCGAGATAGAAAATCACTTGCTCCTTGGCACCATGAACCTAGTCAAT
CGCTTAAACGTCCTCAACAAACTCCCTCTCGAGTCGGAACTCCGACAAGT
GATGCATGGACTAAGAGCCTACACAGCAAATATCGACGACTATATTTCTG
GACGCAGTCCATCCTACAGTCCCCAGGCAATGTGTGACCAGCGCAATTTA
GTCCAGTATCATCTGATGAGCATAGGGCCCATTGCCGGCACAGGACTTGG
GGCTATATCCGAAGTCTGTCGACTAGCGACAATTATCTACAGCATCGGAG
TGACATTTCCACTTTCTGGCGTCCGAGCTCCTTTTGGAACTCTGGCCATG
ACATTACAGTCTGAGTTAGAAAAGAATGATCTTCTCAACAACTGGCCGAT
CCTGGAACATGGCGATATCCTGTTTCTGTGGATCCTGATGGTGGGCGGTA
TAGCAGCTAGGGACAGTCCCGGAAGAGGCTGGTTCATCGAGTGCTTGTCT
GAGATTATGTTTGTCTCAGAGAACGTGCAGTGGAGCTGCGTGAAAGAAAA
GCTACAGATGATACTTTGGCTAGACATTGCTTGCGATATGGCGGGCAGAG
ACGTCTGGAGTGAAGCCCACTCTCTTCTGCAAAATCGAGCGCAAAGGGCA
AAATCAGTCCCTTTATCGCCTAGAGCAAACCAGAAGTTGAAGGCACCTTG
TGCCCACTGTCGATCAAAGAAGATTAAGTGCGATAAGGATGATCCTTGTC
AGAATTGTGTCAGAAGTGGGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCG
GCTTTCCAGGCAAGGGTGCACGTGTTCTCCATGCGACAGAAGCCGTGTGA
TCTGTGTCGACGACGGAGGGTGCGATGTGATAAGGAGAAGCCGTGCAAGC
GCTGCAAAGATGGTGGCTTCAGATGCGTTTACAGAGAAGACCAATGGGTT
GAAAGCTTGGAATTGAGATCCTCCCAGGCTGGTTGCAGTTAGATGCTGAC
CTCCCCATTGGATGCATCTCCTTTCAAAATCATGGAGAGCTCCACACTTG
ACTCCGATCTTCCACCCTTCGATATCAACATATCTTCCGGAATTCCAATA
TCTACCGGTGCAGTGGAAACGGAGGAAGAAACCGATCCCACAGGCGAGAT
CACTCATATTTACCCCGGAGCAGACCTCGTGCCCTTAGACGTCTTCCCGT
CTTCTCTTCCACGACGGCTCGTGAGGCTGGCACTATCTTATCGATTTGCG
ATCATGACGCCTCGTGTACTTCCATCGCGCAATGTGTCTAATCCGTATCT
CCAATACTGGTTTCCTATGTCACTGAACGACCAGGCGACATTTAAGGCTA
TCGTACTATCCTCTCTATCTCATGAGCGGATTAATGGTTTGATCTCAGCA
AACATGGCTAGCCTGACATCGACCAAAGAGGTCGTACCGTATTTGAAACA
ATACTACTTGGATACGATAACTTCGATCAATGAAGCACTACACGATTCTG
CTCGAGCAACTGCTGATGCGACTATCTTGGCGGTCTTGATGATGGTCGAA
AAGCCATTGCTTCAGGATCATAATGAATGGTCCAAGCGGTCTCCATTCCA
GGCACCTCTCCATGGATTACAGTGGTTAGACGTTCACAGTGCTAGAGAGC
CCAATCTGGTCCACCAGATGGGTCTTCACAAGATTATATCCTTGAGGGGT
GGCCTTGCTCAAGTCAAGACCCCCGGTCTTGCAGCCGCCGCATTCTACCG
AGTACTAGTAAATTCGACACTACTGCTCTCCCCTCCGCCGCTTCCTTTCG
TCGCACTGTCTGGCCAGAACGCATCCGAGATAGAAAATCACTTGCTCCTT
GGCACCATGAACCTAGTCAATCGCTTAAACGTCCTCAACAAACTCCCTCT
CGAGTCGGAACTCCGACAAGTGATGCATGGACTAAGAGCCTACACAGCAA
ATATCGACGACTATATTTCTGGACGCAGTCCATCCTACAGTCCCCAGGCA
ATGTGTGACCAGCGCAATTTAGTCCAGTATCATCTGATGAGCATAGGGCC
CATTGCCGGCACAGGACTTGGGGCTATATCCGAAGTCTGTCGACTAGCGA
CAATTATCTACAGCATCGGAGTGACATTTCCACTTTCTGGCGTCCGAGCT
CCTTTTGGAACTCTGGCCATGACATTACAGTCTGAGTTAGAAAAGAATGA
TCTTCTCAACAACTGGCCGATCCTGGAACATGGCGATATCCTGTTTCTGT
GGATCCTGATGGTGGGCGGTATAGCAGCTAGGGACAGTCCCGGAAGAGGC
TGGTTCATCGAGTGCTTGTCTGAGATTATGTTTGTCTCAGAGAACGTGCA
GTGGAGCTGCGTGAAAGAAAAGCTACAGATGATACTTTGGCTAGACATTG
CTTGCGATATGGCGGGCAGAGACGTCTGGAGTGAAGCCCACTCTCTTCTG
CAAAATCGAGCGCAAAGGGCAAAATCAGTCCCTTTATCGCCTAGAGCAAA
CCAGAAGTTGAAGGCACCTTGTGCCCACTGTCGATCAAAGAAGATTAAGT
GCGATAAGGATGATCCTTGTCAGAATTGTGTCAGAAGTGGGCTGAGCTGC
GGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCAAGGGTGCACGTGTTCTC
CATGCGACAGAAGCCGTGTGATCTGTGTCGACGACGGAGGGTGCGATGTG
ATAAGGAGAAGCCGTGCAAGCGCTGCAAAGATGGTGGCTTCAGATGCGTT
TACAGAGAAGACCAATGGGTTGAAAGCTTGGAATTGAGATCCTCCCAGGC
TGGTTGCAGTTAGATGCTGACCTCCCCATTGGATGCATCTCCTTTCAAAA
TCATGGAGAGCTCCACACTTGACTCCGATCTTCCACCCTTCGATATCAAC
ATATCTTCCGGAATTCCAATATCTACCGGTGCAGTGGAAACGGAGGAAGA
AACCGATCCCACAGGCGAGATCACTCATATTTACCCCGGAGCAGACCTCG
TGCCCTTAGACGTCTTCCCGTCTTCTCTTCCACGACGGCTCGTGAGGCTG
GCACTATCTTATCGATTTGCGATCATGACGCCTCGTGTACTTCCATCGCG
CAATGTGTCTAATCCGTATCTCCAATACTGGTTTCCTATGTCACTGAACG
ACCAGGCGACATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAGCGG
ATTAATGGTTTGATCTCAGCAAACATGGCTAGCCTGACATCGACCAAAGA
GGTCGTACCGTATTTGAAACAATACTACTTGGATACGATAACTTCGATCA
ATGAAGCACTACACGATTCTGCTCGAGCAACTGCTGATGCGACTATCTTG
GCGGTCTTGATGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGAATG
GTCCAAGCGGTCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGTTAG
ACGTTCACAGTGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTCAC
AAGATTATATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGTCT
TGCAGCCGCCGCATTCTACCGAGTACTAGTAAATTCGACACTACTGCTCT
CCCCTCCGCCGCTTCCTTTCGTCGCACTGTCTGGCCAGAACGCATCCGAG
ATAGAAAATCACTTGCTCCTTGGCACCATGAACCTAGTCAATCGCTTAAA
CGTCCTCAACAAACTCCCTCTCGAGTCGGAACTCCGACAAGTGATGCATG
GACTAAGAGCCTACACAGCAAATATCGACGACTATATTTCTGGACGCAGT
CCATCCTACAGTCCCCAGGCAATGTGTGACCAGCGCAATTTAGTCCAGTA
TCATCTGATGAGCATAGGGCCCATTGCCGGCACAGGACTTGGGGCTATAT
CCGAAGTCTGTCGACTAGCGACAATTATCTACAGCATCGGAGTGACATTT
CCACTTTCTGGCGTCCGAGCTCCTTTTGGAACTCTGGCCATGACATTACA
GTCTGAGTTAGAAAAGAATGATCTTCTCAACAACTGGCCGATCCTGGAAC
ATGGCGATATCCTGTTTCTGTGGATCCTGATGGTGGGCGGTATAGCAGCT
AGGGACAGTCCCGGAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGATTAT
GTTTGTCTCAGAGAACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTACAGA
TGATACTTTGGCTAGACATTGCTTGCGATATGGCGGGCAGAGACGTCTGG
AGTGAAGCCCACTCTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATCAGT
CCCTTTATCGCCTAGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCCACT
GTCGATCAAAGAAGATTAAGTGCGATAAGGATGATCCTTGTCAGAATTGT
GTCAGAAGTGGGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCA
GGCAAGGGTGCACGTGTTCTCCATGCGACAGAAGCCGTGTGATCTGTGTC
GACGACGGAGGGTGCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGCAAA
GATGGTGGCTTCAGATGCGTTTACAGAGAAGACCAATGGGTTGAAAGCTT
GGAATTGAGATCCTCCCAGGCTGGTTGCAGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_97250-T1 | ATCC64974_97250-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:439941..441920 + |
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