You are here

Home

ATCC64974_97510-T1, ATCC64974_97510-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_97510-T1
Unique NameATCC64974_97510-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:501981..502770+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_97510-T1 ID=ATCC64974_97510-T1|Name=ATCC64974_97510-T1|organism=Aspergillus niger N402|type=mRNA|length=790bp|location=Sequence derived from alignment at OGUI01000017.1:501981..502770+ (Aspergillus niger N402)
ATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTTCAAGGTGTGTTT
ATGACGAGCATGGTTCTGAACTTGCTTTCTATCCTACGTTTCTACCCTTT
CTCTGTTTACTTTGATCTTGTTTTGTCCTTTTCGTCCTCCCCGTCTGGTT
TTTATACTTAAAGGGCACCTGAAATGTTCTGTCATTGGATACGGTTAGTG
GTTGCGTGAGCTAACCTAACATTCTTCTACGCAGCGTATGCAAACTGACC
CTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGACAATGTCATGACCTGG
TAAGCTGATCCAGTCACACCTAATGTCGGCCTTTTGAGTCCCTAACCTTT
GTTACGTCTAGGAACGCCGTCATCATCGGCCCCGCTGATACTCCCTTTGA
AGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTACCCAAACA
AGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCAACGTCTAC
GGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGGAGCCCAAC
CTATGACGTGGCAGCCATCCTGACCAGTATTCAAAGGTACGGACCCTTAC
AATCAGGGTAAAGCTGAAGGAAGATGAAGCACGAAACATGCTAACGAGTG
TTTCACTTGCTTGTAGTCTGTTGAACGATCCCAACACATCATCTCCGGCG
AATGTAGAAGCGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATCAA
GCGCGTGCGCGAGACCGTCGAGAAGAGCTGGGAGGACTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:501981..502770+

>ATCC64974_97510-T1 ID=ATCC64974_97510-T1|Name=ATCC64974_97510-T1|organism=Aspergillus niger N402|type=CDS|length=1824bp|location=Sequence derived from alignment at OGUI01000017.1:501981..502770+ (Aspergillus niger N402)
ATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTTCAAGCGTATGCA
AACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGACAATGTCA
TGACCTGGAACGCCGTCATCATCGGCCCCGCTGATACTCCCTTTGAAGAT
GGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTACCCAAACAAGCC
TCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCAACGTCTACGGTA
CGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGGAGCCCAACCTAT
GACGTGGCAGCCATCCTGACCAGTATTCAAAGTCTGTTGAACGATCCCAA
CACATCATCTCCGGCGAATGTAGAAGCGTCAAACCTTTACAAAGACAACC
GGAAGGAGTACATCAAGCGCGTGCGCGAGACCGTCGAGAAGAGCTGGGAG
GACTAGATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTTCAAGCG
TATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGACA
ATGTCATGACCTGGAACGCCGTCATCATCGGCCCCGCTGATACTCCCTTT
GAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTACCCAAA
CAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCAACGTCT
ACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGGAGCCCA
ACCTATGACGTGGCAGCCATCCTGACCAGTATTCAAAGTCTGTTGAACGA
TCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAAACCTTTACAAAG
ACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACCGTCGAGAAGAGC
TGGGAGGACTAGATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTT
CAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGG
CGGACAATGTCATGACCTGGAACGCCGTCATCATCGGCCCCGCTGATACT
CCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTA
CCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCA
ACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGG
AGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATTCAAAGTCTGTT
GAACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAAACCTTT
ACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACCGTCGAG
AAGAGCTGGGAGGACTAGATGTCGACCTCTGCCCGCCGTCGTCTCATGCG
CGACTTCAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTC
CTGTGGCGGACAATGTCATGACCTGGAACGCCGTCATCATCGGCCCCGCT
GATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGA
GCAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCC
ACCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAAC
CGTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATTCAAAG
TCTGTTGAACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAA
ACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACC
GTCGAGAAGAGCTGGGAGGACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC2ATCC64974_97510Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_97510-T1.exon1ATCC64974_97510-T1.exon1Aspergillus niger N402exon
ATCC64974_97510-T1.exon2ATCC64974_97510-T1.exon2Aspergillus niger N402exon
ATCC64974_97510-T1.exon3ATCC64974_97510-T1.exon3Aspergillus niger N402exon
ATCC64974_97510-T1.exon4ATCC64974_97510-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_97510-T1.cdsATCC64974_97510-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_97510-T1ATCC64974_97510-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme E2 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:501981..502770 +
Powered by Drupal