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ATCC64974_9760-T1, ATCC64974_9760-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_9760-T1
Unique NameATCC64974_9760-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:745909..746741+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_9760-T1 ID=ATCC64974_9760-T1|Name=ATCC64974_9760-T1|organism=Aspergillus niger N402|type=mRNA|length=833bp|location=Sequence derived from alignment at OGUI01000002.1:745909..746741+ (Aspergillus niger N402)
ATGTTGAAGATATGGTCGATGGTATGTCGCGACTGACTCCATCTACCTAC
CAACCCATACATTTCCCTCCCCACTAACACCCTTGAAACAGAAACAACAA
CAGCAGCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAGAA
GGTCACCGCCGCCCAGCTGCGCGTGCAACGAGGTCTGTCCCTCCCTCCCT
CCCTCCCTACCTACCCTTTCTCAAACCACACCCCTCCCCAGGACGTTAAT
AACTAACCATGTATCAACATCGAGATAGACCTGCAAGAGCTCACCCTCGG
AAGTACAATGAAAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCA
CTCTTACTATCGAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCAC
TTCAACTTCACGGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAA
GTGCACGCAGAAGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGT
GCTTGAATATTTTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCT
GTTATTGTGGGGATGCAGGTATGTCTTTTTCTTTTCCTCCCTTTCGGTAT
TGTTTTTGGTTGCTTTGGGGAGAGGGCGAGAGTTTGGATGCTTTTGGAGG
GTGTTTTGCTGATCTTTCTACCTTGCTTAGTTCCTCTTCCTGGAACCGAA
TGCTTCCGATCCGCTGAACAAGGAGGCCGCCGACGATCTGAGACAGAATC
GGGAAGCGTTCAAGCGCAACGTCAGGACGTCTATGGGTGGTGGTAGCGTG
AGGGGGATACAGTATGAGCGGGTTATGCGGTGA
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Coding sequence (CDS) from alignment at OGUI01000002.1:745909..746741+

>ATCC64974_9760-T1 ID=ATCC64974_9760-T1|Name=ATCC64974_9760-T1|organism=Aspergillus niger N402|type=CDS|length=2220bp|location=Sequence derived from alignment at OGUI01000002.1:745909..746741+ (Aspergillus niger N402)
ATGTTGAAGATATGGTCGATGAAACAACAACAGCAGCAAGCTGAAAATGC
CGAAGGAGCTGCTGGTAAAAAGAAGAAGAAGGTCACCGCCGCCCAGCTGC
GCGTGCAACGAGACCTGCAAGAGCTCACCCTCGGAAGTACAATGAAAATG
TCCTTCCCGAACCCCGACGACATCTTGAACTTCACTCTTACTATCGAGCC
GGATGAGGGCATGTACAAGGGCGGCGCATTCCACTTCAACTTCACGGTTA
ACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAGAAGATC
TACCATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGAATATTTTGAG
GGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGGGGATGC
AGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAACAAGGAGGCC
GCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCAACGTCAGGAC
GTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAGCGGGTTATGC
GGTGAATGTTGAAGATATGGTCGATGAAACAACAACAGCAGCAAGCTGAA
AATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAGAAGGTCACCGCCGCCCA
GCTGCGCGTGCAACGAGACCTGCAAGAGCTCACCCTCGGAAGTACAATGA
AAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCACTCTTACTATC
GAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCACTTCAACTTCAC
GGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCACGCAGA
AGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGAATATT
TTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATTGTGGG
GATGCAGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAACAAGG
AGGCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCAACGTC
AGGACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAGCGGGT
TATGCGGTGAATGTTGAAGATATGGTCGATGAAACAACAACAGCAGCAAG
CTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAGAAGGTCACCGCC
GCCCAGCTGCGCGTGCAACGAGACCTGCAAGAGCTCACCCTCGGAAGTAC
AATGAAAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCACTCTTA
CTATCGAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCACTTCAAC
TTCACGGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAGTGCAC
GCAGAAGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGTGCTTGA
ATATTTTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTGTTATT
GTGGGGATGCAGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCGCTGAA
CAAGGAGGCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAAGCGCA
ACGTCAGGACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGTATGAG
CGGGTTATGCGGTGAATGTTGAAGATATGGTCGATGAAACAACAACAGCA
GCAAGCTGAAAATGCCGAAGGAGCTGCTGGTAAAAAGAAGAAGAAGGTCA
CCGCCGCCCAGCTGCGCGTGCAACGAGACCTGCAAGAGCTCACCCTCGGA
AGTACAATGAAAATGTCCTTCCCGAACCCCGACGACATCTTGAACTTCAC
TCTTACTATCGAGCCGGATGAGGGCATGTACAAGGGCGGCGCATTCCACT
TCAACTTCACGGTTAACCAGAATTTCCCGCATGATCCGCCGAAGGTCAAG
TGCACGCAGAAGATCTACCATCCGAATATTGATCTCGAGGGAAATGTGTG
CTTGAATATTTTGAGGGAGGATTGGAAGCCTGTCTTGAACCTGAATGCTG
TTATTGTGGGGATGCAGTTCCTCTTCCTGGAACCGAATGCTTCCGATCCG
CTGAACAAGGAGGCCGCCGACGATCTGAGACAGAATCGGGAAGCGTTCAA
GCGCAACGTCAGGACGTCTATGGGTGGTGGTAGCGTGAGGGGGATACAGT
ATGAGCGGGTTATGCGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC12ATCC64974_9760Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9760-T1.exon1ATCC64974_9760-T1.exon1Aspergillus niger N402exon
ATCC64974_9760-T1.exon2ATCC64974_9760-T1.exon2Aspergillus niger N402exon
ATCC64974_9760-T1.exon3ATCC64974_9760-T1.exon3Aspergillus niger N402exon
ATCC64974_9760-T1.exon4ATCC64974_9760-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9760-T1.cdsATCC64974_9760-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9760-T1ATCC64974_9760-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265FCK
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
ProductNEDD8-conjugating protein ubc12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:745909..746741 +
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