You are here

Home

ATCC64974_98140-T1, ATCC64974_98140-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_98140-T1
Unique NameATCC64974_98140-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:715934..716982+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_98140-T1 ID=ATCC64974_98140-T1|Name=ATCC64974_98140-T1|organism=Aspergillus niger N402|type=mRNA|length=1049bp|location=Sequence derived from alignment at OGUI01000017.1:715934..716982+ (Aspergillus niger N402)
ATGGATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCCCTCATCGCGACC
CACGACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCCGTGAAGCTCATG
GTTATGGCAACAGTATTGGTATGGCAGGCTACACCCAGCCTGCCATCAAT
GCCTTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCATGGCCGACCTCGA
GGCCAACTTCATGCACCTTCAGCTGATGCACGAAAGTTTGACCCGGTTCA
GTGAAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATGAATGCGTTCTGT
GTGGACTTTCCGGAGGTAATTGCGACGGTGAATAATGTCTGTCTTCCCTC
TATAAGCTGACGATCGGTTACAGGCGCCCATTCCCGAATCTTTTCGGAGA
GCCAAGCAAGCAGAGGCACAGAATGGTATGGTCACAGCTGCGCGAAAGGG
AGATCCAACTACTAATAGCACGCATAGAGGCAGAAGCAGAACAGCTGAAA
GCGACCACTGAAGCGGAGATGACATTCATGTGAGATCTGGTTACTCCCCG
GGCCAGTTGTTTCATGCTTTTTTGCATCATACTAACGACATGACGTACTT
AGGACTACGGATACTTCCTTCATCGAACATCCTCCAAGCACCGTCTCCTC
CAAGCCTTCGGCAAAAATCCCAGCCCCGTCGCGTGGCACCACCAGAGGAT
CTACGCGTGGTTCGACAAGCAGTCGCTATGCGACACGGGGCACCAATCGT
GGCGCCCGTCCAAGCGCATTGCCCCGCGGACGAGGATTACGGTGAAGGCA
GGAACCCGGATGGTAGAAATTTTGAACAGGGCGCAGACGGTTGAGCCTGA
AGAGGCACAAAGACTTGCGCGAAGGGAACGGTTTGCTATTGGCAATCCGT
GGAGAATCCCTGCAATTCGCAACGCGCTCCCAAACCTTGAAAGGAACCCC
GTTCCTGAAAGAACATACGGCGATGATTGTCGTAACACAAAGCCTGCCGA
GCGGCCTGTCCGATCTCAGCGGCTCGGATCTTTCTTAAGGAAATTCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:715934..716982+

>ATCC64974_98140-T1 ID=ATCC64974_98140-T1|Name=ATCC64974_98140-T1|organism=Aspergillus niger N402|type=CDS|length=1524bp|location=Sequence derived from alignment at OGUI01000017.1:715934..716982+ (Aspergillus niger N402)
ATGGATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCCCTCATCGCGACC
CACGACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCCGTGAAGCTCATG
GTTATGGCAACAGTATTGGTATGGCAGGCTACACCCAGCCTGCCATCAAT
GCCTTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCATGGCCGACCTCGA
GGCCAACTTCATGCACCTTCAGCTGATGCACGAAAGTTTGACCCGGTTCA
GTGAAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATGAATGCGTTCTGT
GTGGACTTTCCGGAGGACTACGGATACTTCCTTCATCGAACATCCTCCAA
GCACCGTCTCCTCCAAGCCTTCGGCAAAAATCCCAGCCCCGTCGCGTGGC
ACCACCAGAGGATCTACGCGTGGTTCGACAAGCAGTCGCTATGCGACACG
GGGCACCAATCGTGGCGCCCGTCCAAGCGCATTGCCCCGCGGACGAGGAT
TACGGTGAAGGCAGGAACCCGGATGGTAGAAATTTTGAACAGGGCGCAGA
CGGTTGAGCCTGAAGAGGCACAAAGACTTGCGCGAAGGGAACGGTTTGCT
ATTGGCAATCCGTGGAGAATCCCTGCAATTCGCAACGCGCTCCCAAACCT
TGAAAGGAACCCCGTTCCTGAAAGAACATACGGCGATGATTGTCGTAACA
CAAAGCCTGCCGAGCGGCCTGTCCGATCTCAGCGGCTCGGATCTTTCTTA
AGGAAATTCTAGATGGATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCC
CTCATCGCGACCCACGACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCC
GTGAAGCTCATGGTTATGGCAACAGTATTGGTATGGCAGGCTACACCCAG
CCTGCCATCAATGCCTTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCAT
GGCCGACCTCGAGGCCAACTTCATGCACCTTCAGCTGATGCACGAAAGTT
TGACCCGGTTCAGTGAAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATG
AATGCGTTCTGTGTGGACTTTCCGGAGGACTACGGATACTTCCTTCATCG
AACATCCTCCAAGCACCGTCTCCTCCAAGCCTTCGGCAAAAATCCCAGCC
CCGTCGCGTGGCACCACCAGAGGATCTACGCGTGGTTCGACAAGCAGTCG
CTATGCGACACGGGGCACCAATCGTGGCGCCCGTCCAAGCGCATTGCCCC
GCGGACGAGGATTACGGTGAAGGCAGGAACCCGGATGGTAGAAATTTTGA
ACAGGGCGCAGACGGTTGAGCCTGAAGAGGCACAAAGACTTGCGCGAAGG
GAACGGTTTGCTATTGGCAATCCGTGGAGAATCCCTGCAATTCGCAACGC
GCTCCCAAACCTTGAAAGGAACCCCGTTCCTGAAAGAACATACGGCGATG
ATTGTCGTAACACAAAGCCTGCCGAGCGGCCTGTCCGATCTCAGCGGCTC
GGATCTTTCTTAAGGAAATTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0072686mitotic spindle
GO:0042729DASH complex
Vocabulary: Biological Process
TermDefinition
GO:0008608attachment of spindle microtubules to kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_98140ATCC64974_98140Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98140-T1.exon1ATCC64974_98140-T1.exon1Aspergillus niger N402exon
ATCC64974_98140-T1.exon2ATCC64974_98140-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98140-T1.cdsATCC64974_98140-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98140-T1ATCC64974_98140-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265J36
DBxrefInterPro:IPR013962
DBxrefPFAM:PF08653
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:715934..716982 +
Powered by Drupal