You are here

Home

ATCC64974_98200-T1, ATCC64974_98200-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_98200-T1
Unique NameATCC64974_98200-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:739472..740336+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_98200-T1 ID=ATCC64974_98200-T1|Name=ATCC64974_98200-T1|organism=Aspergillus niger N402|type=mRNA|length=865bp|location=Sequence derived from alignment at OGUI01000017.1:739472..740336+ (Aspergillus niger N402)
ATGGCAGAGCACGCAGAGCACACAGAGAGGAATCGTCAGTACTTTGAGTA
TGTGCACACCCATCTTTAGTTTTATTGATCATTTGTCTCACAATCTACAG
CAAGTTGGCCAAGTCCTACACCAACGACTTCAAGAGTGTCCTGGAATTTA
TTTGCAGGCTAGTGGATGGTCACCGTCCCTGGATCAGTGATGCATGGGTC
GACACGGAGGCTGGAAAGGGGAAAGAGATTAAGATGCTAGAGTATGCATG
TGGGACTGGGCCTGTGTCTTTGGTAAGTCACTATGTCTTACTAGATTTCC
TGTTGAAGCAGCCCTGTCATGAACCGCAAGCTGATTCCATAAGACATTGG
CACCTTTTGTGTCGAAAATCGTTGGACTCGACGTCTCAGATAATATGATT
AGCGAGTACAACAAGAATGCCGAAGAAGCGGGCTATGGAGACAAGATGGT
CGCGCTCAAGGGTGACCTTCTGGCTGAGACTGCTCCGGCAGAGCTCTCAG
GGCCCGAGTACTTTGACTTTGATCTCGTGGTTGTCAGCATGGCCCTTCAC
CACTTTGAGAGACCAGAATTAGCCATGGCCCGCTTTAGTGAACGTCTGAA
GAAAGGTGGTGTGTGCGTAATCGTCGACATTGTGCCAGACGATCACCACC
ATGGCCATTGTCACAAGGTTGAGCATGGCTTTGGCGATGCTGAGCATACG
GTCAAAAGCCACGGGTTTACCACGGAGCAGATACAGCAGCTATACGGAGG
AGCAGGGCTTGGGATGGGCTTCAAATATGATATTTCGAAGGAGCAGGTCG
TATTTCGCAAGGACGGAAAAGAGCATTTAAAGACCATATTTATTGCTCGT
GGGCAGCGTGCGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:739472..740336+

>ATCC64974_98200-T1 ID=ATCC64974_98200-T1|Name=ATCC64974_98200-T1|organism=Aspergillus niger N402|type=CDS|length=2223bp|location=Sequence derived from alignment at OGUI01000017.1:739472..740336+ (Aspergillus niger N402)
ATGGCAGAGCACGCAGAGCACACAGAGAGGAATCGTCAGTACTTTGACAA
GTTGGCCAAGTCCTACACCAACGACTTCAAGAGTGTCCTGGAATTTATTT
GCAGGCTAGTGGATGGTCACCGTCCCTGGATCAGTGATGCATGGGTCGAC
ACGGAGGCTGGAAAGGGGAAAGAGATTAAGATGCTAGAGTATGCATGTGG
GACTGGGCCTGTGTCTTTGACATTGGCACCTTTTGTGTCGAAAATCGTTG
GACTCGACGTCTCAGATAATATGATTAGCGAGTACAACAAGAATGCCGAA
GAAGCGGGCTATGGAGACAAGATGGTCGCGCTCAAGGGTGACCTTCTGGC
TGAGACTGCTCCGGCAGAGCTCTCAGGGCCCGAGTACTTTGACTTTGATC
TCGTGGTTGTCAGCATGGCCCTTCACCACTTTGAGAGACCAGAATTAGCC
ATGGCCCGCTTTAGTGAACGTCTGAAGAAAGGTGGTGTGTGCGTAATCGT
CGACATTGTGCCAGACGATCACCACCATGGCCATTGTCACAAGGTTGAGC
ATGGCTTTGGCGATGCTGAGCATACGGTCAAAAGCCACGGGTTTACCACG
GAGCAGATACAGCAGCTATACGGAGGAGCAGGGCTTGGGATGGGCTTCAA
ATATGATATTTCGAAGGAGCAGGTCGTATTTCGCAAGGACGGAAAAGAGC
ATTTAAAGACCATATTTATTGCTCGTGGGCAGCGTGCGTGAATGGCAGAG
CACGCAGAGCACACAGAGAGGAATCGTCAGTACTTTGACAAGTTGGCCAA
GTCCTACACCAACGACTTCAAGAGTGTCCTGGAATTTATTTGCAGGCTAG
TGGATGGTCACCGTCCCTGGATCAGTGATGCATGGGTCGACACGGAGGCT
GGAAAGGGGAAAGAGATTAAGATGCTAGAGTATGCATGTGGGACTGGGCC
TGTGTCTTTGACATTGGCACCTTTTGTGTCGAAAATCGTTGGACTCGACG
TCTCAGATAATATGATTAGCGAGTACAACAAGAATGCCGAAGAAGCGGGC
TATGGAGACAAGATGGTCGCGCTCAAGGGTGACCTTCTGGCTGAGACTGC
TCCGGCAGAGCTCTCAGGGCCCGAGTACTTTGACTTTGATCTCGTGGTTG
TCAGCATGGCCCTTCACCACTTTGAGAGACCAGAATTAGCCATGGCCCGC
TTTAGTGAACGTCTGAAGAAAGGTGGTGTGTGCGTAATCGTCGACATTGT
GCCAGACGATCACCACCATGGCCATTGTCACAAGGTTGAGCATGGCTTTG
GCGATGCTGAGCATACGGTCAAAAGCCACGGGTTTACCACGGAGCAGATA
CAGCAGCTATACGGAGGAGCAGGGCTTGGGATGGGCTTCAAATATGATAT
TTCGAAGGAGCAGGTCGTATTTCGCAAGGACGGAAAAGAGCATTTAAAGA
CCATATTTATTGCTCGTGGGCAGCGTGCGTGAATGGCAGAGCACGCAGAG
CACACAGAGAGGAATCGTCAGTACTTTGACAAGTTGGCCAAGTCCTACAC
CAACGACTTCAAGAGTGTCCTGGAATTTATTTGCAGGCTAGTGGATGGTC
ACCGTCCCTGGATCAGTGATGCATGGGTCGACACGGAGGCTGGAAAGGGG
AAAGAGATTAAGATGCTAGAGTATGCATGTGGGACTGGGCCTGTGTCTTT
GACATTGGCACCTTTTGTGTCGAAAATCGTTGGACTCGACGTCTCAGATA
ATATGATTAGCGAGTACAACAAGAATGCCGAAGAAGCGGGCTATGGAGAC
AAGATGGTCGCGCTCAAGGGTGACCTTCTGGCTGAGACTGCTCCGGCAGA
GCTCTCAGGGCCCGAGTACTTTGACTTTGATCTCGTGGTTGTCAGCATGG
CCCTTCACCACTTTGAGAGACCAGAATTAGCCATGGCCCGCTTTAGTGAA
CGTCTGAAGAAAGGTGGTGTGTGCGTAATCGTCGACATTGTGCCAGACGA
TCACCACCATGGCCATTGTCACAAGGTTGAGCATGGCTTTGGCGATGCTG
AGCATACGGTCAAAAGCCACGGGTTTACCACGGAGCAGATACAGCAGCTA
TACGGAGGAGCAGGGCTTGGGATGGGCTTCAAATATGATATTTCGAAGGA
GCAGGTCGTATTTCGCAAGGACGGAAAAGAGCATTTAAAGACCATATTTA
TTGCTCGTGGGCAGCGTGCGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_98200ATCC64974_98200Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98200-T1.exon1ATCC64974_98200-T1.exon1Aspergillus niger N402exon
ATCC64974_98200-T1.exon2ATCC64974_98200-T1.exon2Aspergillus niger N402exon
ATCC64974_98200-T1.exon3ATCC64974_98200-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98200-T1.cdsATCC64974_98200-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98200-T1ATCC64974_98200-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029063
DBxrefPFAM:PF01209
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08242
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:739472..740336 +
Powered by Drupal