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ATCC64974_98330-T1, ATCC64974_98330-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_98330-T1
Unique NameATCC64974_98330-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:775680..776209-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_98330-T1 ID=ATCC64974_98330-T1|Name=ATCC64974_98330-T1|organism=Aspergillus niger N402|type=mRNA|length=530bp|location=Sequence derived from alignment at OGUI01000017.1:775680..776209- (Aspergillus niger N402)
ATGGGAGCTGTCAGGAAAATCAAGACGAAGCGCAGGACCAGGTATGTAGG
CTAATATCTTTAACGATGAACATGATTATGGCCCTAGGTAGAAGGGTTGC
GTAAAGCTGAATAGACGCTAATGATCTGATACAATCGACAGAGACTATGA
TCAGGTCCGAGCTGATATCGCATCCGCGAGACACCTCGAGCTGTACAAAG
CTACGAAAGATGAGGAGGACCTTCCCGGCCTAGGAAAGCATTACTGCGTC
GAGTGCTCCAAATGGTTTGAGAGCGAGCATAACATGGTCGCCCATACGAA
GGGCAAGAACCACAAGAGAAGGTGTGTGGCCAACATATCTATGATGTCGC
TGCTGCAGGCGCAAGTACTTTCTGGACGCATAAATGCTAACCTATGCGCT
CGTTGTTAGACTCCGCATCTTGCGCGAAGAGGCACACACACAGAAGGCTG
CTGAGGCTGCTGTCGGCTTGGGTACAGACAATGGTGTGAGGTCGCAAGAG
ACTACCGAGATGGTCATTATGGAGGATTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:775680..776209-

>ATCC64974_98330-T1 ID=ATCC64974_98330-T1|Name=ATCC64974_98330-T1|organism=Aspergillus niger N402|type=CDS|length=1026bp|location=Sequence derived from alignment at OGUI01000017.1:775680..776209- (Aspergillus niger N402)
ACTCCGCATCTTGCGCGAAGAGGCACACACACAGAAGGCTGCTGAGGCTG
CTGTCGGCTTGGGTACAGACAATGGTGTGAGGTCGCAAGAGACTACCGAG
ATGGTCATTATGGAGGATTAGAGACTATGATCAGGTCCGAGCTGATATCG
CATCCGCGAGACACCTCGAGCTGTACAAAGCTACGAAAGATGAGGAGGAC
CTTCCCGGCCTAGGAAAGCATTACTGCGTCGAGTGCTCCAAATGGTTTGA
GAGCGAGCATAACATGGTCGCCCATACGAAGGGCAAGAACCACAAGAGAA
GATGGGAGCTGTCAGGAAAATCAAGACGAAGCGCAGGACCAGACTCCGCA
TCTTGCGCGAAGAGGCACACACACAGAAGGCTGCTGAGGCTGCTGTCGGC
TTGGGTACAGACAATGGTGTGAGGTCGCAAGAGACTACCGAGATGGTCAT
TATGGAGGATTAGAGACTATGATCAGGTCCGAGCTGATATCGCATCCGCG
AGACACCTCGAGCTGTACAAAGCTACGAAAGATGAGGAGGACCTTCCCGG
CCTAGGAAAGCATTACTGCGTCGAGTGCTCCAAATGGTTTGAGAGCGAGC
ATAACATGGTCGCCCATACGAAGGGCAAGAACCACAAGAGAAGATGGGAG
CTGTCAGGAAAATCAAGACGAAGCGCAGGACCAGACTCCGCATCTTGCGC
GAAGAGGCACACACACAGAAGGCTGCTGAGGCTGCTGTCGGCTTGGGTAC
AGACAATGGTGTGAGGTCGCAAGAGACTACCGAGATGGTCATTATGGAGG
ATTAGAGACTATGATCAGGTCCGAGCTGATATCGCATCCGCGAGACACCT
CGAGCTGTACAAAGCTACGAAAGATGAGGAGGACCTTCCCGGCCTAGGAA
AGCATTACTGCGTCGAGTGCTCCAAATGGTTTGAGAGCGAGCATAACATG
GTCGCCCATACGAAGGGCAAGAACCACAAGAGAAGATGGGAGCTGTCAGG
AAAATCAAGACGAAGCGCAGGACCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_98330ATCC64974_98330Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98330-T1ATCC64974_98330-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98330-T1.cdsATCC64974_98330-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98330-T1.exon3ATCC64974_98330-T1.exon3Aspergillus niger N402exon
ATCC64974_98330-T1.exon2ATCC64974_98330-T1.exon2Aspergillus niger N402exon
ATCC64974_98330-T1.exon1ATCC64974_98330-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR022755
DBxrefInterPro:IPR003604
DBxrefPFAM:PF12171
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:775680..776209 -
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