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ATCC64974_98710-T1, ATCC64974_98710-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_98710-T1
Unique NameATCC64974_98710-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:904211..905270-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_98710-T1 ID=ATCC64974_98710-T1|Name=ATCC64974_98710-T1|organism=Aspergillus niger N402|type=mRNA|length=1060bp|location=Sequence derived from alignment at OGUI01000017.1:904211..905270- (Aspergillus niger N402)
ATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGG
TACTGGAAAGGCAAGTTAAAACAAGAATTTCTTATCCCATATGGCTTACT
GGGTGGAGGTGGCATGTCACCTCTTCGACGCCTCTTTATGCTCGACTGCA
TTCCTGCCATGCGCGTTTACCCCTCTCTGTTGCCCGTCGTCTCTATCAAC
AGAAAACTTCATCGCCCGCCCAACCTCACCCAGACGAGACATCATTACTG
ACTGAGGATTTTCACTGCAGACCACCTTCGTCAAGCGCCACTTGACTGGC
GAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAGTGCACCCTCT
CGCTTTTAACACCGTATGCCCCGCCGGAAACCCCGCTTTGTCCATTCCGC
CGTCTTTGTGCCGGTCCGACTAACGCTTTTGCCAGAACCTGGGTAACATC
CAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCG
CGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTA
CCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTAAGTGCTTC
CACAAATCAGCACTCGAACCACGCGCAATATGGATCAAATTGACAAATTC
ACTCTAGGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTG
CGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCA
CCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCC
AACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGG
CAACCCCCAGCTGGTAAGTCAGACACGGTCATTGGTCGCTTTCACTGGTG
AGACTGGAAGCTAACAAGCATTTCCCAGGAATTCGTTGCTGCCCCCGCTC
TTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGCCCAGTACGAG
AAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGACGAGGAGGACGC
CGATTTGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:904211..905270-

>ATCC64974_98710-T1 ID=ATCC64974_98710-T1|Name=ATCC64974_98710-T1|organism=Aspergillus niger N402|type=CDS|length=3225bp|location=Sequence derived from alignment at OGUI01000017.1:904211..905270- (Aspergillus niger N402)
GAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCC
GGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGC
CCCTGCCCGACGAGGAGGACGCCGATTTGTAAGTGATCTCGTCCGTGTCT
GCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAG
CGTAAGGTGAAGGCCAAGACCATCACCTTCCACCGCAAGAAGAACCTCCA
GTACTACGACATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCC
TCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGAACCTGGGTAAC
ATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCT
TCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATG
TTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCACCACCTT
CGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTC
TCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCATGGCTGCTCAGGTA
CCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGGAATT
CGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGC
TTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTG
CCCGACGAGGAGGACGCCGATTTGTAAGTGATCTCGTCCGTGTCTGCGAG
GGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAA
GGTGAAGGCCAAGACCATCACCTTCCACCGCAAGAAGAACCTCCAGTACT
ACGACATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGG
CTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGAACCTGGGTAACATCCA
GTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCG
ATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTACC
TCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCACCACCTTCGTCA
AGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGT
GTCGAAGTGCACCCTCTCGCTTTTAACACCATGGCTGCTCAGGTACCGAC
CTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGGAATTCGTTG
CTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTG
GCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGA
CGAGGAGGACGCCGATTTGTAAGTGATCTCGTCCGTGTCTGCGAGGGTAT
CCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGA
AGGCCAAGACCATCACCTTCCACCGCAAGAAGAACCTCCAGTACTACGAC
ATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGC
TCGCAAGTTGGTCGGCAACCCCCAGCTGAACCTGGGTAACATCCAGTTCG
ACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCGATGGT
TACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTACCTCCCG
TATCACCTACAAGAACGTCCCCAACTGGCACCACCACCTTCGTCAAGCGC
CACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGA
AGTGCACCCTCTCGCTTTTAACACCATGGCTGCTCAGGTACCGACCTTCA
AGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGGAATTCGTTGCTGCC
CCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGCCCA
GTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGACGAGG
AGGACGCCGATTTGTAAGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCA
TCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCC
AAGACCATCACCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTC
CGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCA
AGTTGGTCGGCAACCCCCAGCTGAACCTGGGTAACATCCAGTTCGACGTC
TGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCGATGGTTACTA
CATCAACGGACAGTGCGGTATCATCATGTTCGATGTTACCTCCCGTATCA
CCTACAAGAACGTCCCCAACTGGCACCACCACCTTCGTCAAGCGCCACTT
GACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAGTGC
ACCCTCTCGCTTTTAACACCATGGCTGCTCAGGTACCGACCTTCAAGCTT
GTCCTCGTCGGTGACGGTGGTACTGGAAAGGAATTCGTTGCTGCCCCCGC
TCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGCCCAGTACG
AGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGACGAGGAGGAC
GCCGATTTGTAAGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTG
CTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGAC
CATCACCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCA
AGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTG
GTCGGCAACCCCCAGCTGAACCTGGGTAACATCCAGTTCGACGTCTGGGA
CACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCGATGGTTACTACATCA
ACGGACAGTGCGGTATCATCATGTTCGATGTTACCTCCCGTATCACCTAC
AAGAACGTCCCCAACTGGCACCACCACCTTCGTCAAGCGCCACTTGACTG
GCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAGTGCACCCT
CTCGCTTTTAACACCATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCT
CGTCGGTGACGGTGGTACTGGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006913nucleocytoplasmic transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GSP1ATCC64974_98710Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98710-T1ATCC64974_98710-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98710-T1.cdsATCC64974_98710-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98710-T1.exon5ATCC64974_98710-T1.exon5Aspergillus niger N402exon
ATCC64974_98710-T1.exon4ATCC64974_98710-T1.exon4Aspergillus niger N402exon
ATCC64974_98710-T1.exon3ATCC64974_98710-T1.exon3Aspergillus niger N402exon
ATCC64974_98710-T1.exon2ATCC64974_98710-T1.exon2Aspergillus niger N402exon
ATCC64974_98710-T1.exon1ATCC64974_98710-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264LKR
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR002041
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductGTP-binding nuclear protein gsp1/Ran
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:904211..905270 -
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