You are here

Home

ATCC64974_99700-T1, ATCC64974_99700-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_99700-T1
Unique NameATCC64974_99700-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:1219229..1220770-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_99700-T1 ID=ATCC64974_99700-T1|Name=ATCC64974_99700-T1|organism=Aspergillus niger N402|type=mRNA|length=1542bp|location=Sequence derived from alignment at OGUI01000017.1:1219229..1220770- (Aspergillus niger N402)
ATGACAGACTCCGCCGAGATGGCCTCCTCAGACAGTACAATCGAAGGCAC
GCTTTCGCGGTCAGAATCCATCCGCTCAGCCGTCCAGACCTTCTCGCCTC
TTCATGAGCTCGTCTTCGTCTTCGTGGTGTGCATGTCGCAATTCATGACG
CAGGCCGCGCTCGGAAATACGCTCGCCCCACTTGAGATCATCAGTGACAG
CTTCGGCATCACCAACCCTGGCATCTCCAGCTGGCTGATCGCAGGGTACT
CCCTAACTGTCGGTACATTTATTCTTTTCTTTGGCCGCTGTGGCGATATT
TTCGGATACCGTATCTTGTATATCATCGGATGGATATGGTTCGCGATCTG
GTCCCTGGTGGCGGGGGTGAGCGTATATTCGAACTACATCCTATTCGTTT
TCGCGCGCACCTTGCAAGGCATCGGGCCTGCGATGCTCCTTCCCAATGGC
CTGGCGCTGCTGGGTGCGACGTACCGACCGGGAAAGAAGAAGTATATGGT
CTTCTCACTCTTCGGGGCTACCGCGCCAAACGGCGCCGTTTTGGGAGCCA
TCTTTGCGTCGCTATTCTCCCAGCTCGCTTGGTGGCCGTGGACTTTCTGG
GCCATGGCGATCTATTGTTTTGTATTGGCAATTATGTCGTTTCTTGCGAT
TCCTCCTTCCCCGTCGATTGCGCAGGGCATGTCGCTCGGACAGCTGGTGT
CTGAATTAGATGTGGTCGGGGCATTCTTTGGAGTTGCAGGCCTGGTTCTT
ATTAATATCGCCTGGAACCAGGCGCCCGTGGTGGGATGGCAAGAGGCGTA
TGTGTACGTCCTGCTGATCATTGGGGCTCTGATTCTGGCCACGTTCTTCG
TCTGGGAGATCAAGTACGCGTCCAAGCCACTCATCCCGTTCCATGCGCTG
GATCTCGATGTCTGCTTTATTCTGGGCTGCATTGCATGTGGCTGGGCCAG
TTTCGGAATCTGGGTTTACTACTTCTGGCGGTTCTTGGAGAATATCCGAG
GCATATCGCCGTTGCTGGCATCGGCGCAGTTTATCCCGCCAGCCTTGTCT
GGACTGACAGCCTCCTTCACGACGGGGCTTCTCATGGCAAGATTGCGGCC
CGGCTGGATCATGCTGATGGCCATGGTGGCTTTCACCCTGGGTAATATCT
TTTCGGCTATCGCTCCGGTTCACCAGACGTATTGGGCGTTGGCCTTTGTG
ACGCTGTTGGTCACTCCGTGGGGAATGGACATGTCGTTCCCTGCAGCTAC
AGTCGTCTTATCGAATGCGGTTGGGCGTCGCCATCAGGGCGTTGCGGCGT
CGTTGGTCACGACGGTTGTCAATTATAGTATCTCGCTGGGACTTGGCTTT
GCGGGCACGGTCGAGGTGCATGTGAACAACGGTGGCCAGACCTTCCATGA
CACGCTCATAGGATATCGAGGAGCATTGTATATGGGCATCGGACTGGGTG
GGCTTGGAGTTGCCATCAGTCTGCTCTATCTTATTAAGAGCAGACCGAGA
CCGGGCCAAGAAGAGAACCAGCTGGAAAAGGCAGCCGAATAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:1219229..1220770-

>ATCC64974_99700-T1 ID=ATCC64974_99700-T1|Name=ATCC64974_99700-T1|organism=Aspergillus niger N402|type=CDS|length=1542bp|location=Sequence derived from alignment at OGUI01000017.1:1219229..1220770- (Aspergillus niger N402)
ATGACAGACTCCGCCGAGATGGCCTCCTCAGACAGTACAATCGAAGGCAC
GCTTTCGCGGTCAGAATCCATCCGCTCAGCCGTCCAGACCTTCTCGCCTC
TTCATGAGCTCGTCTTCGTCTTCGTGGTGTGCATGTCGCAATTCATGACG
CAGGCCGCGCTCGGAAATACGCTCGCCCCACTTGAGATCATCAGTGACAG
CTTCGGCATCACCAACCCTGGCATCTCCAGCTGGCTGATCGCAGGGTACT
CCCTAACTGTCGGTACATTTATTCTTTTCTTTGGCCGCTGTGGCGATATT
TTCGGATACCGTATCTTGTATATCATCGGATGGATATGGTTCGCGATCTG
GTCCCTGGTGGCGGGGGTGAGCGTATATTCGAACTACATCCTATTCGTTT
TCGCGCGCACCTTGCAAGGCATCGGGCCTGCGATGCTCCTTCCCAATGGC
CTGGCGCTGCTGGGTGCGACGTACCGACCGGGAAAGAAGAAGTATATGGT
CTTCTCACTCTTCGGGGCTACCGCGCCAAACGGCGCCGTTTTGGGAGCCA
TCTTTGCGTCGCTATTCTCCCAGCTCGCTTGGTGGCCGTGGACTTTCTGG
GCCATGGCGATCTATTGTTTTGTATTGGCAATTATGTCGTTTCTTGCGAT
TCCTCCTTCCCCGTCGATTGCGCAGGGCATGTCGCTCGGACAGCTGGTGT
CTGAATTAGATGTGGTCGGGGCATTCTTTGGAGTTGCAGGCCTGGTTCTT
ATTAATATCGCCTGGAACCAGGCGCCCGTGGTGGGATGGCAAGAGGCGTA
TGTGTACGTCCTGCTGATCATTGGGGCTCTGATTCTGGCCACGTTCTTCG
TCTGGGAGATCAAGTACGCGTCCAAGCCACTCATCCCGTTCCATGCGCTG
GATCTCGATGTCTGCTTTATTCTGGGCTGCATTGCATGTGGCTGGGCCAG
TTTCGGAATCTGGGTTTACTACTTCTGGCGGTTCTTGGAGAATATCCGAG
GCATATCGCCGTTGCTGGCATCGGCGCAGTTTATCCCGCCAGCCTTGTCT
GGACTGACAGCCTCCTTCACGACGGGGCTTCTCATGGCAAGATTGCGGCC
CGGCTGGATCATGCTGATGGCCATGGTGGCTTTCACCCTGGGTAATATCT
TTTCGGCTATCGCTCCGGTTCACCAGACGTATTGGGCGTTGGCCTTTGTG
ACGCTGTTGGTCACTCCGTGGGGAATGGACATGTCGTTCCCTGCAGCTAC
AGTCGTCTTATCGAATGCGGTTGGGCGTCGCCATCAGGGCGTTGCGGCGT
CGTTGGTCACGACGGTTGTCAATTATAGTATCTCGCTGGGACTTGGCTTT
GCGGGCACGGTCGAGGTGCATGTGAACAACGGTGGCCAGACCTTCCATGA
CACGCTCATAGGATATCGAGGAGCATTGTATATGGGCATCGGACTGGGTG
GGCTTGGAGTTGCCATCAGTCTGCTCTATCTTATTAAGAGCAGACCGAGA
CCGGGCCAAGAAGAGAACCAGCTGGAAAAGGCAGCCGAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_99700ATCC64974_99700Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_99700-T1.cdsATCC64974_99700-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_99700-T1.exon1ATCC64974_99700-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_99700-T1ATCC64974_99700-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:1219229..1220770 -
Powered by Drupal