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KYF_001995-T1, KYF_001995-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001995-T1
Unique NameKYF_001995-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2118212..2119240-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001995-T1 ID=KYF_001995-T1|Name=KYF_001995-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1029bp|location=Sequence derived from alignment at ch2:2118212..2119240- (Aspergillus niger KYF3)
ATGGGTGAGTGAATTTTTCCAAAATACCTTTATTGTCTCTCAATGGTGGA
TCGGCTATTGCGATATTCCCCCTGCGATCGTTGAACGACTTTTTACGGCA
TCATTTTATCTCAGCGACATCGGATAATATAAGACTCGATTGAAATTGGA
CTGGAATCGGTTGGGAACAAGAATGGTGGAAGGATTTTTCAACTCTGGAC
GACTAATGGGGGAGGACGAAATTTTCGAAGATATCGTGGCGCAGAAATGA
AATCATCGCAAAGGACCGACGACTTGCACAACAGTCAACAACGTTTCGCA
CGGAATATACGCAACGACTGAAGCCATTGCACGAGGCAGTTCTCATCGGA
TGGGAGAACATGGCTGACTGGGATCCTTAGGGCGTCTCACCGAGTACCAG
GTCATTGGGCGTCACCTGCCCACCGAGGCTAACCCCACGCCCAAGCTGTA
CCGCATGCGCATCTTCGCGCCCAACACTGTTGTCGCTAAGTCCCGGTTCT
GGTACTTCCTGACCCAGCTCCGCAAGGTCAAGAAGGCCAACGGTGAGATC
GTCAGCATCAATGTGGTATGTGTGGCCGTTATCAAGCGACAACTCGGCAG
TGTTGGCTGACGCCTGTCTTTTTTCCCCATCCAATAGATCAGCGAGAAGC
GCCCTACCAAGGTCAAGAACTTCGGTATCTGGCTCCGCTACGACTCCCGC
TCCGGCACCCACAACATGTACAAGGAGTTCCGTGAGATGAGCCGCACCGA
GGCTGTTGAGGCTCTCTACCAGGACATGGCTGCCCGCCACCGTGCCCGCT
TCGGCTCCATCCACGTATGTTGAGATTCCTATCCTCTTTTGCTGAGGAAT
ATTGCGATCTAACTACGTTCCTACAGATCCTTAAGGTTGTTGAGATCGAG
AACGCCGACAGCATCCGCCGCCCCTACATCAAGCAGCTCCTCTCCAAGAA
CCTCAAGTTCCCCCTGCCCCACCGTGCTGCCCACGGCAAGAAGCTGTTCG
CTTACTCTCGTCCCACTACTTTCGCGTAA
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Coding sequence (CDS) from alignment at ch2:2118212..2119240-

>KYF_001995-T1 ID=KYF_001995-T1|Name=KYF_001995-T1|organism=Aspergillus niger KYF3|type=CDS|length=2076bp|location=Sequence derived from alignment at ch2:2118212..2119240- (Aspergillus niger KYF3)
ATCCTTAAGGTTGTTGAGATCGAGAACGCCGACAGCATCCGCCGCCCCTA
CATCAAGCAGCTCCTCTCCAAGAACCTCAAGTTCCCCCTGCCCCACCGTG
CTGCCCACGGCAAGAAGCTGTTCGCTTACTCTCGTCCCACTACTTTCGCG
TAAATCAGCGAGAAGCGCCCTACCAAGGTCAAGAACTTCGGTATCTGGCT
CCGCTACGACTCCCGCTCCGGCACCCACAACATGTACAAGGAGTTCCGTG
AGATGAGCCGCACCGAGGCTGTTGAGGCTCTCTACCAGGACATGGCTGCC
CGCCACCGTGCCCGCTTCGGCTCCATCCACGGCGTCTCACCGAGTACCAG
GTCATTGGGCGTCACCTGCCCACCGAGGCTAACCCCACGCCCAAGCTGTA
CCGCATGCGCATCTTCGCGCCCAACACTGTTGTCGCTAAGTCCCGGTTCT
GGTACTTCCTGACCCAGCTCCGCAAGGTCAAGAAGGCCAACGGTGAGATC
GTCAGCATCAATGTGATGGATCCTTAAGGTTGTTGAGATCGAGAACGCCG
ACAGCATCCGCCGCCCCTACATCAAGCAGCTCCTCTCCAAGAACCTCAAG
TTCCCCCTGCCCCACCGTGCTGCCCACGGCAAGAAGCTGTTCGCTTACTC
TCGTCCCACTACTTTCGCGTAAATCAGCGAGAAGCGCCCTACCAAGGTCA
AGAACTTCGGTATCTGGCTCCGCTACGACTCCCGCTCCGGCACCCACAAC
ATGTACAAGGAGTTCCGTGAGATGAGCCGCACCGAGGCTGTTGAGGCTCT
CTACCAGGACATGGCTGCCCGCCACCGTGCCCGCTTCGGCTCCATCCACG
GCGTCTCACCGAGTACCAGGTCATTGGGCGTCACCTGCCCACCGAGGCTA
ACCCCACGCCCAAGCTGTACCGCATGCGCATCTTCGCGCCCAACACTGTT
GTCGCTAAGTCCCGGTTCTGGTACTTCCTGACCCAGCTCCGCAAGGTCAA
GAAGGCCAACGGTGAGATCGTCAGCATCAATGTGATGGATCCTTAAGGTT
GTTGAGATCGAGAACGCCGACAGCATCCGCCGCCCCTACATCAAGCAGCT
CCTCTCCAAGAACCTCAAGTTCCCCCTGCCCCACCGTGCTGCCCACGGCA
AGAAGCTGTTCGCTTACTCTCGTCCCACTACTTTCGCGTAAATCAGCGAG
AAGCGCCCTACCAAGGTCAAGAACTTCGGTATCTGGCTCCGCTACGACTC
CCGCTCCGGCACCCACAACATGTACAAGGAGTTCCGTGAGATGAGCCGCA
CCGAGGCTGTTGAGGCTCTCTACCAGGACATGGCTGCCCGCCACCGTGCC
CGCTTCGGCTCCATCCACGGCGTCTCACCGAGTACCAGGTCATTGGGCGT
CACCTGCCCACCGAGGCTAACCCCACGCCCAAGCTGTACCGCATGCGCAT
CTTCGCGCCCAACACTGTTGTCGCTAAGTCCCGGTTCTGGTACTTCCTGA
CCCAGCTCCGCAAGGTCAAGAAGGCCAACGGTGAGATCGTCAGCATCAAT
GTGATGGATCCTTAAGGTTGTTGAGATCGAGAACGCCGACAGCATCCGCC
GCCCCTACATCAAGCAGCTCCTCTCCAAGAACCTCAAGTTCCCCCTGCCC
CACCGTGCTGCCCACGGCAAGAAGCTGTTCGCTTACTCTCGTCCCACTAC
TTTCGCGTAAATCAGCGAGAAGCGCCCTACCAAGGTCAAGAACTTCGGTA
TCTGGCTCCGCTACGACTCCCGCTCCGGCACCCACAACATGTACAAGGAG
TTCCGTGAGATGAGCCGCACCGAGGCTGTTGAGGCTCTCTACCAGGACAT
GGCTGCCCGCCACCGTGCCCGCTTCGGCTCCATCCACGGCGTCTCACCGA
GTACCAGGTCATTGGGCGTCACCTGCCCACCGAGGCTAACCCCACGCCCA
AGCTGTACCGCATGCGCATCTTCGCGCCCAACACTGTTGTCGCTAAGTCC
CGGTTCTGGTACTTCCTGACCCAGCTCCGCAAGGTCAAGAAGGCCAACGG
TGAGATCGTCAGCATCAATGTGATGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL20AKYF_001995Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001995-T1KYF_001995-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001995-T1.cdsKYF_001995-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001995-T1.exon4KYF_001995-T1.exon4Aspergillus niger KYF3exon
KYF_001995-T1.exon3KYF_001995-T1.exon3Aspergillus niger KYF3exon
KYF_001995-T1.exon2KYF_001995-T1.exon2Aspergillus niger KYF3exon
KYF_001995-T1.exon1KYF_001995-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR028877
DBxrefInterPro:IPR023573
DBxrefInterPro:IPR021138
DBxrefPFAM:PF01775
Product60S ribosomal protein L20A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2118212..2119240 -
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