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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3656999..3657897- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002510-T1 ID=KYF_002510-T1|Name=KYF_002510-T1|organism=Aspergillus niger KYF3|type=mRNA|length=899bp|location=Sequence derived from alignment at ch2:3656999..3657897- (Aspergillus niger KYF3)
ATGTCACGACACGCCCAAGTGGAGGAGGTGTATGACTCCGACCCGGAGGA
AGTTGCTCCCTCCGATTCCTCGCCCGCCAACTTTGCCAATGAGTCCCTCC
TTTCTGGAGCCGGAGTACCTATGTCTGGCTCAGTACCCATGAGACCCGCT
CCCGAACCTCAGCGCGAAATCCCCAAGCATTACCAGTGCCTGTATCCGAT
ATACTTCGACAAGTCGCGGACCCGCGCGGAGGGCCGCAAGGTCGGAAGTG
AGCTGGCGGTTGAGAACCCGCTGGCGAGGGACATTGTCGATGCGGTGCAG
ATGTTGGGACTGAATGTCGGGTTCGAGCCTGAGAAGCTGCACCCGAAGGA
CTGGGCCAACCCTGGACGTGTGCGCGTTTTGCTGAAGGACGAGGATGGCA
AATTGGTTAACTCGAGGATCAAGAACAGTTAGTGTACCCCAACTTGTCCG
CAAGTTACTATCAAATCCGACGCCTTTTGATATGGCCTGATCACAGTTCC
CTTTGTCTGACCATAACTACAGAGCACCACCTTTACATCCTCGTGGCGCA
ATACCTCAAGGCTCACCCTACCACCGAAGAATCCCCCTACCGTCTTAGAA
TTCGAGGACTCCCTATGCCCGAGAAACTGCCTGCTGCGCCTGCCGCTCCC
CGCGGATGGAAGATCGGAAAGATCCTGCCGATACACTCTCCGGCCTACAG
CGGTGGTGGAGTCAGCGATAACCCGCTCAAGGACGCCATGGCTGAAATGC
AGAACATGCAGGGTATGCCCGGAATGCCCCAGATACCTGGAATGCCGGAT
CTGGCAGGAATGATGGGAGGAATGGGAGGAATGGGTGGAAGTCCGTCTGC
TGGAGGCAGCGAAAAGAAGAAGAAGGATAAGAAGAAGGGCAAGGCGTGA back to topCoding sequence (CDS) from alignment at ch2:3656999..3657897- >KYF_002510-T1 ID=KYF_002510-T1|Name=KYF_002510-T1|organism=Aspergillus niger KYF3|type=CDS|length=1608bp|location=Sequence derived from alignment at ch2:3656999..3657897- (Aspergillus niger KYF3)
AGCACCACCTTTACATCCTCGTGGCGCAATACCTCAAGGCTCACCCTACC
ACCGAAGAATCCCCCTACCGTCTTAGAATTCGAGGACTCCCTATGCCCGA
GAAACTGCCTGCTGCGCCTGCCGCTCCCCGCGGATGGAAGATCGGAAAGA
TCCTGCCGATACACTCTCCGGCCTACAGCGGTGGTGGAGTCAGCGATAAC
CCGCTCAAGGACGCCATGGCTGAAATGCAGAACATGCAGGGTATGCCCGG
AATGCCCCAGATACCTGGAATGCCGGATCTGGCAGGAATGATGGGAGGAA
TGGGAGGAATGGGTGGAAGTCCGTCTGCTGGAGGCAGCGAAAAGAAGAAG
AAGGATAAGAAGAAGGGCAAGGCGTGAATGTCACGACACGCCCAAGTGGA
GGAGGTGTATGACTCCGACCCGGAGGAAGTTGCTCCCTCCGATTCCTCGC
CCGCCAACTTTGCCAATGAGTCCCTCCTTTCTGGAGCCGGAGTACCTATG
TCTGGCTCAGTACCCATGAGACCCGCTCCCGAACCTCAGCGCGAAATCCC
CAAGCATTACCAGTGCCTGTATCCGATATACTTCGACAAGTCGCGGACCC
GCGCGGAGGGCCGCAAGGTCGGAAGTGAGCTGGCGGTTGAGAACCCGCTG
GCGAGGGACATTGTCGATGCGGTGCAGATGTTGGGACTGAATGTCGGGTT
CGAGCCTGAGAAGCTGCACCCGAAGGACTGGGCCAACCCTGGACGTGTGC
GCGTTTTGCTGAAGGACGAGGATGGCAAATTGGTTAACTCGAGGATCAAG
AACAAGCACCACCTTTACATCCTCGTGGCGCAATACCTCAAGGCTCACCC
TACCACCGAAGAATCCCCCTACCGTCTTAGAATTCGAGGACTCCCTATGC
CCGAGAAACTGCCTGCTGCGCCTGCCGCTCCCCGCGGATGGAAGATCGGA
AAGATCCTGCCGATACACTCTCCGGCCTACAGCGGTGGTGGAGTCAGCGA
TAACCCGCTCAAGGACGCCATGGCTGAAATGCAGAACATGCAGGGTATGC
CCGGAATGCCCCAGATACCTGGAATGCCGGATCTGGCAGGAATGATGGGA
GGAATGGGAGGAATGGGTGGAAGTCCGTCTGCTGGAGGCAGCGAAAAGAA
GAAGAAGGATAAGAAGAAGGGCAAGGCGTGAATGTCACGACACGCCCAAG
TGGAGGAGGTGTATGACTCCGACCCGGAGGAAGTTGCTCCCTCCGATTCC
TCGCCCGCCAACTTTGCCAATGAGTCCCTCCTTTCTGGAGCCGGAGTACC
TATGTCTGGCTCAGTACCCATGAGACCCGCTCCCGAACCTCAGCGCGAAA
TCCCCAAGCATTACCAGTGCCTGTATCCGATATACTTCGACAAGTCGCGG
ACCCGCGCGGAGGGCCGCAAGGTCGGAAGTGAGCTGGCGGTTGAGAACCC
GCTGGCGAGGGACATTGTCGATGCGGTGCAGATGTTGGGACTGAATGTCG
GGTTCGAGCCTGAGAAGCTGCACCCGAAGGACTGGGCCAACCCTGGACGT
GTGCGCGTTTTGCTGAAGGACGAGGATGGCAAATTGGTTAACTCGAGGAT
CAAGAACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0048500 | signal recognition particle |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008312 | 7S RNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092647CM |
| DBxref | InterPro:IPR022938 |
| DBxref | InterPro:IPR002778 |
| DBxref | InterPro:IPR036521 |
| DBxref | PFAM:PF01922 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3656999..3657897 - |
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