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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2685679..2686452- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005108-T1 ID=KYF_005108-T1|Name=KYF_005108-T1|organism=Aspergillus niger KYF3|type=mRNA|length=774bp|location=Sequence derived from alignment at ch4:2685679..2686452- (Aspergillus niger KYF3)
ATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGGTAAGTTCTGCTCGCCGA
ATCTTGCCCCTCTTCGGTCGCCCGCCATCTTTCAATTCCAGGCATTTGTT
CGGCACGTTGTTGGCTGGCAAACCTACGAGCCGGGCAAGTATCATATCTA
AAGCATCGATGCTGACCGGTTTCAGGATTCTCTTTGTAAAGAACCTCAAG
TACGTCGATGATTTCCCAAGATTCGTTCCTCGACTCGCAAACCATCCGTC
GCATACCTGTCGACCAACAGCCAGCAGGCGACAGGCGCCCATCGTCTTCC
AAAATGCAAGAGCTAACCTGATTGTTTCCTTACAGCTACAACGTCACAGC
TGAGCAACTCTTTGACCTCTTCGGCAAATTTGGTCCCATCCGGTAAATCT
GCGCATGACTCACGTTCAGCCCACTTCTTGGTCAATAATGGCTAATTGTT
CCTGTTTCTTCCAGCCAAATACGTCAGGGAATCGCCAACAACTCGAAGGG
CACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAACAGGCATGCG
ATAAGCTCAATGGATTCAACTTCCAGAACAGATACCTCGTCGGTATGTAA
CCCCGTGTCAAGGGGAGATGAAGCAGAGAATATATGGAGACAAGCCGATT
GGCTGACATTTGTTTCTTTCTAGTTCTATATCACCAGCCTGAGAAAATGC
TTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGTCTC
AAACAGCAACATGGGATAGAATGA back to topCoding sequence (CDS) from alignment at ch4:2685679..2686452- >KYF_005108-T1 ID=KYF_005108-T1|Name=KYF_005108-T1|organism=Aspergillus niger KYF3|type=CDS|length=1710bp|location=Sequence derived from alignment at ch4:2685679..2686452- (Aspergillus niger KYF3)
TTCTATATCACCAGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCG
GAAAGGCAAGAGAATTTGGAGCGTCTCAAACAGCAACATGGGATAGAATG
ACCAAATACGTCAGGGAATCGCCAACAACTCGAAGGGCACAGCCTTTGTG
GTTTACGAAGACGTTCATGACGCCAAACAGGCATGCGATAAGCTCAATGG
ATTCAACTTCCAGAACAGATACCTCGTCGCTACAACGTCACAGCTGAGCA
ACTCTTTGACCTCTTCGGCAAATTTGGTCCCATCCGGATTCTCTTTGTAA
AGAACCTCAAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGTTCTATAT
CACCAGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCA
AGAGAATTTGGAGCGTCTCAAACAGCAACATGGGATAGAATGACCAAATA
CGTCAGGGAATCGCCAACAACTCGAAGGGCACAGCCTTTGTGGTTTACGA
AGACGTTCATGACGCCAAACAGGCATGCGATAAGCTCAATGGATTCAACT
TCCAGAACAGATACCTCGTCGCTACAACGTCACAGCTGAGCAACTCTTTG
ACCTCTTCGGCAAATTTGGTCCCATCCGGATTCTCTTTGTAAAGAACCTC
AAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGTTCTATATCACCAGCC
TGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATT
TGGAGCGTCTCAAACAGCAACATGGGATAGAATGACCAAATACGTCAGGG
AATCGCCAACAACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGACGTTC
ATGACGCCAAACAGGCATGCGATAAGCTCAATGGATTCAACTTCCAGAAC
AGATACCTCGTCGCTACAACGTCACAGCTGAGCAACTCTTTGACCTCTTC
GGCAAATTTGGTCCCATCCGGATTCTCTTTGTAAAGAACCTCAAATGAGC
CGGAAGCTCGCCCCCGAAGCCAATCGTTCTATATCACCAGCCTGAGAAAA
TGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGT
CTCAAACAGCAACATGGGATAGAATGACCAAATACGTCAGGGAATCGCCA
ACAACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCC
AAACAGGCATGCGATAAGCTCAATGGATTCAACTTCCAGAACAGATACCT
CGTCGCTACAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATT
TGGTCCCATCCGGATTCTCTTTGTAAAGAACCTCAAATGAGCCGGAAGCT
CGCCCCCGAAGCCAATCGTTCTATATCACCAGCCTGAGAAAATGCTTAGG
TCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGTCTCAAACA
GCAACATGGGATAGAATGACCAAATACGTCAGGGAATCGCCAACAACTCG
AAGGGCACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAACAGGC
ATGCGATAAGCTCAATGGATTCAACTTCCAGAACAGATACCTCGTCGCTA
CAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATTTGGTCCCA
TCCGGATTCTCTTTGTAAAGAACCTCAAATGAGCCGGAAGCTCGCCCCCG
AAGCCAATCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034150 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF13893 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2685679..2686452 - |
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