You are here

Home

KYF_005269-T1, KYF_005269-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005269-T1
Unique NameKYF_005269-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3175848..3176822-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005269-T1 ID=KYF_005269-T1|Name=KYF_005269-T1|organism=Aspergillus niger KYF3|type=mRNA|length=975bp|location=Sequence derived from alignment at ch4:3175848..3176822- (Aspergillus niger KYF3)
ATGGATACCAACGGCGAAGTGACGGAGGCTGCTCCGGTTGTTGAGAAGCC
GGTTGCTGAGACTGAGGGTATATACCTTTCTCCCCTCTCGACTTGTGGAT
ATCAAATTTGATATTGACCTCTACGCATCACCTACAGACAAGGCCGTCGA
CGAAGTTACCGAACTCTTCAAGGGTCTTTCGAAAAAGAAGAAGAGCAAGA
AGCCCAAGGACACCGAGGGCGATGACGAGACCCCCGCCGCCGACGGCGAG
TTCGACCCCTCCGCTCTGAAGAAGAAGAAGAAGAAGCCGAAGAAGGTCGA
CGCGGGCGATTTCGAGGCCAAGCTGGCTGAGGCCGGTGTTGCAGAGAAGG
AAGGTGCCGTCGCCGAGGAGAAGGAAGAGGTCGTCCCCGAGGGAGACCAC
GAAGCTGGAACCGGTATCTGGGCTCACGACGCCGCGCAACCCATCCCGTA
CTCGCTGCTTGTGTCCCGATTCTTCTCCCTCATTCAGAGCCACCACCCCG
ATCTGTTGTCCAGCGGTACCAAGTCGTATAAGATCCCGCCGCCCCAGTGT
CTGCGTGAAGGTAACCGTCGTACGATTTTCGCCAACATTGCCGATATCTG
CAAGCGCATGAAGCGGTCCGATGATCACGTTATGCAGTTCTTGTTCGCCG
AATTGGGTACCAGTGGTAGTGTGGACGGTAGCCGTCGTCTGGTTATCAAG
GGTCGTTTCCAGCAGAAGCAGATTGAGAACGTCTTGAGAAGATACATCGG
TATGTTGCTTTGCTATATGGTTATTTTTCAAATCAATAACGACACTAACG
TTGTATAGTCGAATACGTCACCTGCAAGACCTGCCGCAGTCCCGACACCG
AGCTCAACAAGGGTGAGAACCGTCTATACTTCGTCACCTGCAACTCTTGC
GGTTCTCGTCGTTCCGTCGCCGCCATCAAGACCGGTTTCCGTGGACAGGT
CGGCCGCAGAAAGAGACAGGGTTAA
back to top

Coding sequence (CDS) from alignment at ch4:3175848..3176822-

>KYF_005269-T1 ID=KYF_005269-T1|Name=KYF_005269-T1|organism=Aspergillus niger KYF3|type=CDS|length=2538bp|location=Sequence derived from alignment at ch4:3175848..3176822- (Aspergillus niger KYF3)
TCGAATACGTCACCTGCAAGACCTGCCGCAGTCCCGACACCGAGCTCAAC
AAGGGTGAGAACCGTCTATACTTCGTCACCTGCAACTCTTGCGGTTCTCG
TCGTTCCGTCGCCGCCATCAAGACCGGTTTCCGTGGACAGGTCGGCCGCA
GAAAGAGACAGGGTTAAACAAGGCCGTCGACGAAGTTACCGAACTCTTCA
AGGGTCTTTCGAAAAAGAAGAAGAGCAAGAAGCCCAAGGACACCGAGGGC
GATGACGAGACCCCCGCCGCCGACGGCGAGTTCGACCCCTCCGCTCTGAA
GAAGAAGAAGAAGAAGCCGAAGAAGGTCGACGCGGGCGATTTCGAGGCCA
AGCTGGCTGAGGCCGGTGTTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAG
AAGGAAGAGGTCGTCCCCGAGGGAGACCACGAAGCTGGAACCGGTATCTG
GGCTCACGACGCCGCGCAACCCATCCCGTACTCGCTGCTTGTGTCCCGAT
TCTTCTCCCTCATTCAGAGCCACCACCCCGATCTGTTGTCCAGCGGTACC
AAGTCGTATAAGATCCCGCCGCCCCAGTGTCTGCGTGAAGGTAACCGTCG
TACGATTTTCGCCAACATTGCCGATATCTGCAAGCGCATGAAGCGGTCCG
ATGATCACGTTATGCAGTTCTTGTTCGCCGAATTGGGTACCAGTGGTAGT
GTGGACGGTAGCCGTCGTCTGGTTATCAAGGGTCGTTTCCAGCAGAAGCA
GATTGAGAACGTCTTGAGAAGATACATCGATGGATACCAACGGCGAAGTG
ACGGAGGCTGCTCCGGTTGTTGAGAAGCCGGTTGCTGAGACTGAGGTCGA
ATACGTCACCTGCAAGACCTGCCGCAGTCCCGACACCGAGCTCAACAAGG
GTGAGAACCGTCTATACTTCGTCACCTGCAACTCTTGCGGTTCTCGTCGT
TCCGTCGCCGCCATCAAGACCGGTTTCCGTGGACAGGTCGGCCGCAGAAA
GAGACAGGGTTAAACAAGGCCGTCGACGAAGTTACCGAACTCTTCAAGGG
TCTTTCGAAAAAGAAGAAGAGCAAGAAGCCCAAGGACACCGAGGGCGATG
ACGAGACCCCCGCCGCCGACGGCGAGTTCGACCCCTCCGCTCTGAAGAAG
AAGAAGAAGAAGCCGAAGAAGGTCGACGCGGGCGATTTCGAGGCCAAGCT
GGCTGAGGCCGGTGTTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAGAAGG
AAGAGGTCGTCCCCGAGGGAGACCACGAAGCTGGAACCGGTATCTGGGCT
CACGACGCCGCGCAACCCATCCCGTACTCGCTGCTTGTGTCCCGATTCTT
CTCCCTCATTCAGAGCCACCACCCCGATCTGTTGTCCAGCGGTACCAAGT
CGTATAAGATCCCGCCGCCCCAGTGTCTGCGTGAAGGTAACCGTCGTACG
ATTTTCGCCAACATTGCCGATATCTGCAAGCGCATGAAGCGGTCCGATGA
TCACGTTATGCAGTTCTTGTTCGCCGAATTGGGTACCAGTGGTAGTGTGG
ACGGTAGCCGTCGTCTGGTTATCAAGGGTCGTTTCCAGCAGAAGCAGATT
GAGAACGTCTTGAGAAGATACATCGATGGATACCAACGGCGAAGTGACGG
AGGCTGCTCCGGTTGTTGAGAAGCCGGTTGCTGAGACTGAGGTCGAATAC
GTCACCTGCAAGACCTGCCGCAGTCCCGACACCGAGCTCAACAAGGGTGA
GAACCGTCTATACTTCGTCACCTGCAACTCTTGCGGTTCTCGTCGTTCCG
TCGCCGCCATCAAGACCGGTTTCCGTGGACAGGTCGGCCGCAGAAAGAGA
CAGGGTTAAACAAGGCCGTCGACGAAGTTACCGAACTCTTCAAGGGTCTT
TCGAAAAAGAAGAAGAGCAAGAAGCCCAAGGACACCGAGGGCGATGACGA
GACCCCCGCCGCCGACGGCGAGTTCGACCCCTCCGCTCTGAAGAAGAAGA
AGAAGAAGCCGAAGAAGGTCGACGCGGGCGATTTCGAGGCCAAGCTGGCT
GAGGCCGGTGTTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAGAAGGAAGA
GGTCGTCCCCGAGGGAGACCACGAAGCTGGAACCGGTATCTGGGCTCACG
ACGCCGCGCAACCCATCCCGTACTCGCTGCTTGTGTCCCGATTCTTCTCC
CTCATTCAGAGCCACCACCCCGATCTGTTGTCCAGCGGTACCAAGTCGTA
TAAGATCCCGCCGCCCCAGTGTCTGCGTGAAGGTAACCGTCGTACGATTT
TCGCCAACATTGCCGATATCTGCAAGCGCATGAAGCGGTCCGATGATCAC
GTTATGCAGTTCTTGTTCGCCGAATTGGGTACCAGTGGTAGTGTGGACGG
TAGCCGTCGTCTGGTTATCAAGGGTCGTTTCCAGCAGAAGCAGATTGAGA
ACGTCTTGAGAAGATACATCGATGGATACCAACGGCGAAGTGACGGAGGC
TGCTCCGGTTGTTGAGAAGCCGGTTGCTGAGACTGAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005269KYF_005269Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005269-T1KYF_005269-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005269-T1.cdsKYF_005269-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005269-T1.exon3KYF_005269-T1.exon3Aspergillus niger KYF3exon
KYF_005269-T1.exon2KYF_005269-T1.exon2Aspergillus niger KYF3exon
KYF_005269-T1.exon1KYF_005269-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG09264OQ8
DBxrefInterPro:IPR016190
DBxrefInterPro:IPR016189
DBxrefInterPro:IPR000048
DBxrefInterPro:IPR002735
DBxrefPFAM:PF01873
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3175848..3176822 -
Powered by Drupal