You are here

Home

KYF_005455-T1, KYF_005455-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005455-T1
Unique NameKYF_005455-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3753947..3756199-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005455-T1 ID=KYF_005455-T1|Name=KYF_005455-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2253bp|location=Sequence derived from alignment at ch4:3753947..3756199- (Aspergillus niger KYF3)
ATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCTACTTATAGCAGTGT
GAGTACTCCTTCATCTTGCCCTTTCTGGTATTGCAAAGACCTTGTCCTTT
GAGGCGTGTTGAACAACACCGTGCGCAGGCTTGTGACAGCAATCTAACAC
TGGTGGCTAGGTCCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTCA
TGCGAAGGCGTTCCGATGACTGGATAAATGCTACACATATTCTGAAAGTT
GCCGGGTTTGACAAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGCA
GAAAGGGGTCCATGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGGTG
AGATTTATTAGCATTCCCAATATTGCATCGCTTTGCCGCGCTACAACTAT
GTGCAGGGACATGGATTCCGCTTCCTGAGGGCCGCATGCTCGCTGAGCGC
AACAACATAATCGACAAGCTAAGGCCGATATTCGACTACGTTGCTGGAGA
TCGCAGTCCACCACCTGCCCCGAAACATACCACTGCAGCCTCGTCGAAGC
CAAGAGCCCCAAAGAATACAAACAAGAGAGTCGCGAATGAAGAGGTTGTC
CCTGCTGTAAAACCGCACCGAAGTATGGCACCGCCCGCCTATCATCCCTA
TGAGCCCTATGAAATGAGCCAAGGATTCGACGAGGATGAATCTTTAGAAC
AGGCAACGCTTGAGTCATCGTCTATGATCGCGGATGATGAGATTATGGCA
ATGTCTCAAAATGGTACATACTCACGAAAGCGCAAGCGTGGGATAAACGA
GGCCCCAGCAATCTCAATTAGTGAACAGGAACACATACTCTATGGTGATC
AGTTGTTGGATTATTTCATGACAGTAGGGGATGCACCGGAAGCGACACGC
ATTCCTCCCCCACAACCGCCTGCCAACTTCCAGGTCGATCGCGCGATTGA
CGAATCTGGAAATACTGCTCTCCATTGGGCATGCGCCATGGGTGACTTGG
AGATTGTGAGAGATCTACTACGGAGAGGGGCAAATATCAAAGCTCTATCT
GAACAGGAGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACGAACAATTA
TGAGAAGAGGACGTTTCCACCGCTATTAGATCTTCTCTTGGACACAGTCT
CATTCCGAGACTGGTTCGGCGCCACTCTATTCCACCACATAGCAGAGACT
ACTCGGAGCAAAGGCAAATGGAAGAGCTCGCGATATTACTGCGAAGTATT
GCTAGACAAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGATTTATTGC
TGTCTTGTCAAGATCAGAATGGGGACACTGCTGCTCTGATTGCTGCTCGA
AATGGCGCGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGTCCGCGATC
TGGTGAGCTTATAAATAATAAAGGCGAGGCAGCCTCAACTATCGTCCGAC
GGGTACCACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGTCTATCACG
ATGGGTAATGATCAATTAGATCCCGACGTCACAGCACCTGTCACATCAGA
TCACCAGCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTACCTCGGCAT
TAATGTCTAAGATTGCCGTCATAATGGCCGAGGCGAACAGGAAACTCACC
GCAGGCTACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGACGATGTTGC
GAATCCGGAGGCACTTTATGCGCAACTTGAATCGGATCGGCAAAAGATTC
AGAAACAGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAGAGTCAATC
GACGCGCAGCTGGACCGCTACGAACAATTAAGACATAGCTACGAATCCGT
CTTGGAGCAAATTCACCAGGCTCGACTCAGAGAGAGGATCGCATCAACGC
CAGTGCCCGAGAAGGAAGATACGGGATCTGACCAGGACCAACAACTTCGC
ACATATCATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCTCGGCGCGC
AGCCGTGAAGGATCTTGTCCAACAGACGGCCGATGCGGGTGTAAGCACTA
AATTCGATGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCCTCAAAGAG
GAAGATCTAGATCCAATGGCCGCAGAGCTGGCTGAAACACTAGAATTCGA
TCGAATGAATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCCAGAGGCCA
GGGAGTCGGCCACATTCCCCATTCCTGGTCCGACGGTATCCGTGGATGCC
TGA
back to top

Coding sequence (CDS) from alignment at ch4:3753947..3756199-

>KYF_005455-T1 ID=KYF_005455-T1|Name=KYF_005455-T1|organism=Aspergillus niger KYF3|type=CDS|length=6246bp|location=Sequence derived from alignment at ch4:3753947..3756199- (Aspergillus niger KYF3)
GGACATGGATTCCGCTTCCTGAGGGCCGCATGCTCGCTGAGCGCAACAAC
ATAATCGACAAGCTAAGGCCGATATTCGACTACGTTGCTGGAGATCGCAG
TCCACCACCTGCCCCGAAACATACCACTGCAGCCTCGTCGAAGCCAAGAG
CCCCAAAGAATACAAACAAGAGAGTCGCGAATGAAGAGGTTGTCCCTGCT
GTAAAACCGCACCGAAGTATGGCACCGCCCGCCTATCATCCCTATGAGCC
CTATGAAATGAGCCAAGGATTCGACGAGGATGAATCTTTAGAACAGGCAA
CGCTTGAGTCATCGTCTATGATCGCGGATGATGAGATTATGGCAATGTCT
CAAAATGGTACATACTCACGAAAGCGCAAGCGTGGGATAAACGAGGCCCC
AGCAATCTCAATTAGTGAACAGGAACACATACTCTATGGTGATCAGTTGT
TGGATTATTTCATGACAGTAGGGGATGCACCGGAAGCGACACGCATTCCT
CCCCCACAACCGCCTGCCAACTTCCAGGTCGATCGCGCGATTGACGAATC
TGGAAATACTGCTCTCCATTGGGCATGCGCCATGGGTGACTTGGAGATTG
TGAGAGATCTACTACGGAGAGGGGCAAATATCAAAGCTCTATCTGAACAG
GAGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACGAACAATTATGAGAA
GAGGACGTTTCCACCGCTATTAGATCTTCTCTTGGACACAGTCTCATTCC
GAGACTGGTTCGGCGCCACTCTATTCCACCACATAGCAGAGACTACTCGG
AGCAAAGGCAAATGGAAGAGCTCGCGATATTACTGCGAAGTATTGCTAGA
CAAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGATTTATTGCTGTCTT
GTCAAGATCAGAATGGGGACACTGCTGCTCTGATTGCTGCTCGAAATGGC
GCGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGTCCGCGATCTGGTGA
GCTTATAAATAATAAAGGCGAGGCAGCCTCAACTATCGTCCGACGGGTAC
CACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGTCTATCACGATGGGT
AATGATCAATTAGATCCCGACGTCACAGCACCTGTCACATCAGATCACCA
GCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTACCTCGGCATTAATGT
CTAAGATTGCCGTCATAATGGCCGAGGCGAACAGGAAACTCACCGCAGGC
TACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGACGATGTTGCGAATCC
GGAGGCACTTTATGCGCAACTTGAATCGGATCGGCAAAAGATTCAGAAAC
AGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAGAGTCAATCGACGCG
CAGCTGGACCGCTACGAACAATTAAGACATAGCTACGAATCCGTCTTGGA
GCAAATTCACCAGGCTCGACTCAGAGAGAGGATCGCATCAACGCCAGTGC
CCGAGAAGGAAGATACGGGATCTGACCAGGACCAACAACTTCGCACATAT
CATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGT
GAAGGATCTTGTCCAACAGACGGCCGATGCGGGTGTAAGCACTAAATTCG
ATGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCCTCAAAGAGGAAGAT
CTAGATCCAATGGCCGCAGAGCTGGCTGAAACACTAGAATTCGATCGAAT
GAATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCCAGAGGCCAGGGAGT
CGGCCACATTCCCCATTCCTGGTCCGACGGTATCCGTGGATGCCTGAGTC
CCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTCATGCGAAGGCGTTC
CGATGACTGGATAAATGCTACACATATTCTGAAAGTTGCCGGGTTTGACA
AGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGCAGAAAGGGGTCCAT
GAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGATGGCGGCCGTGGACT
TCTCCAAAGTTTACTCTGCTACTTATAGCAGTGGACATGGATTCCGCTTC
CTGAGGGCCGCATGCTCGCTGAGCGCAACAACATAATCGACAAGCTAAGG
CCGATATTCGACTACGTTGCTGGAGATCGCAGTCCACCACCTGCCCCGAA
ACATACCACTGCAGCCTCGTCGAAGCCAAGAGCCCCAAAGAATACAAACA
AGAGAGTCGCGAATGAAGAGGTTGTCCCTGCTGTAAAACCGCACCGAAGT
ATGGCACCGCCCGCCTATCATCCCTATGAGCCCTATGAAATGAGCCAAGG
ATTCGACGAGGATGAATCTTTAGAACAGGCAACGCTTGAGTCATCGTCTA
TGATCGCGGATGATGAGATTATGGCAATGTCTCAAAATGGTACATACTCA
CGAAAGCGCAAGCGTGGGATAAACGAGGCCCCAGCAATCTCAATTAGTGA
ACAGGAACACATACTCTATGGTGATCAGTTGTTGGATTATTTCATGACAG
TAGGGGATGCACCGGAAGCGACACGCATTCCTCCCCCACAACCGCCTGCC
AACTTCCAGGTCGATCGCGCGATTGACGAATCTGGAAATACTGCTCTCCA
TTGGGCATGCGCCATGGGTGACTTGGAGATTGTGAGAGATCTACTACGGA
GAGGGGCAAATATCAAAGCTCTATCTGAACAGGAGGAGACACCCCTCGTG
CGTGCCGTGCTGTTCACGAACAATTATGAGAAGAGGACGTTTCCACCGCT
ATTAGATCTTCTCTTGGACACAGTCTCATTCCGAGACTGGTTCGGCGCCA
CTCTATTCCACCACATAGCAGAGACTACTCGGAGCAAAGGCAAATGGAAG
AGCTCGCGATATTACTGCGAAGTATTGCTAGACAAGCTACGCGTTACGTT
CTCGGCTGAGGAAGTTGATTTATTGCTGTCTTGTCAAGATCAGAATGGGG
ACACTGCTGCTCTGATTGCTGCTCGAAATGGCGCGTTTCGTTTGGTTGAC
CTACTACTCGCTCGGTGTCCGCGATCTGGTGAGCTTATAAATAATAAAGG
CGAGGCAGCCTCAACTATCGTCCGACGGGTACCACCTAATGAGCGCGACG
TCCCTCTTCCCCCTTCGTCTATCACGATGGGTAATGATCAATTAGATCCC
GACGTCACAGCACCTGTCACATCAGATCACCAGCCTCCCAGCCTTCCGCA
GGATTCCTCCCCTGCTACCTCGGCATTAATGTCTAAGATTGCCGTCATAA
TGGCCGAGGCGAACAGGAAACTCACCGCAGGCTACGGGAGCTCCAAGGCA
AACCAGCAAGATTCAGACGATGTTGCGAATCCGGAGGCACTTTATGCGCA
ACTTGAATCGGATCGGCAAAAGATTCAGAAACAGGTTAGTATGCTGGTGG
CGAAAGAAGCCGAAGAAGAGTCAATCGACGCGCAGCTGGACCGCTACGAA
CAATTAAGACATAGCTACGAATCCGTCTTGGAGCAAATTCACCAGGCTCG
ACTCAGAGAGAGGATCGCATCAACGCCAGTGCCCGAGAAGGAAGATACGG
GATCTGACCAGGACCAACAACTTCGCACATATCATATGGCCCGTCAATTG
TGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGTGAAGGATCTTGTCCAACA
GACGGCCGATGCGGGTGTAAGCACTAAATTCGATGTCCATCGCAAGTTGG
TAGCACTTGCCACCGGCCTCAAAGAGGAAGATCTAGATCCAATGGCCGCA
GAGCTGGCTGAAACACTAGAATTCGATCGAATGAATGGGAAGGCTGCAGG
AGCCGAGTCACCAGAGCCAGAGGCCAGGGAGTCGGCCACATTCCCCATTC
CTGGTCCGACGGTATCCGTGGATGCCTGAGTCCCGGTTTATGAGTTCAAA
ATCGACGGTGACAGTGTCATGCGAAGGCGTTCCGATGACTGGATAAATGC
TACACATATTCTGAAAGTTGCCGGGTTTGACAAGCCTGCGAGGACTCGCA
TCCTGGAACGCGAGGTGCAGAAAGGGGTCCATGAAAAGGTGCAAGGTGGC
TATGGGAAATATCAAGATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTG
CTACTTATAGCAGTGGACATGGATTCCGCTTCCTGAGGGCCGCATGCTCG
CTGAGCGCAACAACATAATCGACAAGCTAAGGCCGATATTCGACTACGTT
GCTGGAGATCGCAGTCCACCACCTGCCCCGAAACATACCACTGCAGCCTC
GTCGAAGCCAAGAGCCCCAAAGAATACAAACAAGAGAGTCGCGAATGAAG
AGGTTGTCCCTGCTGTAAAACCGCACCGAAGTATGGCACCGCCCGCCTAT
CATCCCTATGAGCCCTATGAAATGAGCCAAGGATTCGACGAGGATGAATC
TTTAGAACAGGCAACGCTTGAGTCATCGTCTATGATCGCGGATGATGAGA
TTATGGCAATGTCTCAAAATGGTACATACTCACGAAAGCGCAAGCGTGGG
ATAAACGAGGCCCCAGCAATCTCAATTAGTGAACAGGAACACATACTCTA
TGGTGATCAGTTGTTGGATTATTTCATGACAGTAGGGGATGCACCGGAAG
CGACACGCATTCCTCCCCCACAACCGCCTGCCAACTTCCAGGTCGATCGC
GCGATTGACGAATCTGGAAATACTGCTCTCCATTGGGCATGCGCCATGGG
TGACTTGGAGATTGTGAGAGATCTACTACGGAGAGGGGCAAATATCAAAG
CTCTATCTGAACAGGAGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACG
AACAATTATGAGAAGAGGACGTTTCCACCGCTATTAGATCTTCTCTTGGA
CACAGTCTCATTCCGAGACTGGTTCGGCGCCACTCTATTCCACCACATAG
CAGAGACTACTCGGAGCAAAGGCAAATGGAAGAGCTCGCGATATTACTGC
GAAGTATTGCTAGACAAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGA
TTTATTGCTGTCTTGTCAAGATCAGAATGGGGACACTGCTGCTCTGATTG
CTGCTCGAAATGGCGCGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGT
CCGCGATCTGGTGAGCTTATAAATAATAAAGGCGAGGCAGCCTCAACTAT
CGTCCGACGGGTACCACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGT
CTATCACGATGGGTAATGATCAATTAGATCCCGACGTCACAGCACCTGTC
ACATCAGATCACCAGCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTAC
CTCGGCATTAATGTCTAAGATTGCCGTCATAATGGCCGAGGCGAACAGGA
AACTCACCGCAGGCTACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGAC
GATGTTGCGAATCCGGAGGCACTTTATGCGCAACTTGAATCGGATCGGCA
AAAGATTCAGAAACAGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAG
AGTCAATCGACGCGCAGCTGGACCGCTACGAACAATTAAGACATAGCTAC
GAATCCGTCTTGGAGCAAATTCACCAGGCTCGACTCAGAGAGAGGATCGC
ATCAACGCCAGTGCCCGAGAAGGAAGATACGGGATCTGACCAGGACCAAC
AACTTCGCACATATCATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCT
CGGCGCGCAGCCGTGAAGGATCTTGTCCAACAGACGGCCGATGCGGGTGT
AAGCACTAAATTCGATGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCC
TCAAAGAGGAAGATCTAGATCCAATGGCCGCAGAGCTGGCTGAAACACTA
GAATTCGATCGAATGAATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCC
AGAGGCCAGGGAGTCGGCCACATTCCCCATTCCTGGTCCGACGGTATCCG
TGGATGCCTGAGTCCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTC
ATGCGAAGGCGTTCCGATGACTGGATAAATGCTACACATATTCTGAAAGT
TGCCGGGTTTGACAAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGC
AGAAAGGGGTCCATGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGAT
GGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCTACTTATAGCAGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005455KYF_005455Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005455-T1KYF_005455-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005455-T1.cdsKYF_005455-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005455-T1.exon3KYF_005455-T1.exon3Aspergillus niger KYF3exon
KYF_005455-T1.exon2KYF_005455-T1.exon2Aspergillus niger KYF3exon
KYF_005455-T1.exon1KYF_005455-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR003163
DBxrefInterPro:IPR036887
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR018004
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3753947..3756199 -
Powered by Drupal