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KYF_005974-T1, KYF_005974-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005974-T1
Unique NameKYF_005974-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5386849..5388098+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005974-T1 ID=KYF_005974-T1|Name=KYF_005974-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1250bp|location=Sequence derived from alignment at ch4:5386849..5388098+ (Aspergillus niger KYF3)
ATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGA
CAAGTGGAAGGTACGCTATATCACCCAAATCTAAAACATCGAAACACTCG
AACCCGACCGAAACTAACCTGCAAATTTGTTGCGACCAGGTCGAACCCTT
CCAAGCCGAAGACAATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCG
CCACTCTTTTCCCCAAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCC
GTGGTGACAAGAGCGCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTT
GGTCGAGGGTAGCATGACAGTCAAGACGACCCGAAAGACGTTTGATCCTG
CTGCGATTCTCAAGGCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTG
CCGGTGCAACAGGTAAATAACCCTGAATTTATGATTTCTAGGTTACCGAT
AAAGTTACTAACACATTAAAACTAAATAGGCCCTCAAAATCCTCGAAGAC
GACGTCGCATGCGACATCATCAAGATCCGCAACCAAGTCCGCAACAAGGA
GCGCTTCGTTAAGCGTCGTCAACGCATTCTCGGTCCCGGTGGATCCACCC
TGAAAGCCTTGGAGCTGCTCACAAGCACCTACATCCTGGTCCAGGGTAAC
ACGGTCTCCGCCATGGGCCCCTACAAGGGTCTCAAGGAAGTCCGTCGCAT
CATCAACGACTGCATGGCCAACATCCACCCGATCTACCACATTAAGGAAC
TCATGATCAAGCGCGAATTGGCCAAGGACCCGACCCTGGCGAACGAATCC
TGGGACCGCTTCCTGCCTAACTTCAAGAAGCGCACGCTGTCCAAGCGTCG
CGTGCCGTTCAAGGTCACCGACAAGACGAAGAAGGTGTACACTCCTTTCC
CGCCGGCGCCGGAGAAGAGCAAGGTGGATCTCCAGATCGAGTCGGGCGAG
TACTTCCTGTCCAAGGAGGCGAAGGATCGGCAGCAGAAGGAGGAGGTCAT
GGAGAGACAGCGGTTGAAGCGCGAAGAGAAGATGAAGGAGCGCGAGAAGG
CGTTCGTGCCGCCCGAGGAGCTGGACGCAGAGGAGAAGAAGAAGGAAAAG
AAGGAGAAGAAGGAGAAGAAAGAGAAGAAGAAGCGGAAGCGCGATTCCGA
GGCCGCGGATGTAGATGGCGACGATGGTGCCGAGAAGAAGGAAAAGAAGA
AGAAGAAGAAGTCCAAGTCGAAAGAGGATGCGTCGGATGGAGAGGCGTGA
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Coding sequence (CDS) from alignment at ch4:5386849..5388098+

>KYF_005974-T1 ID=KYF_005974-T1|Name=KYF_005974-T1|organism=Aspergillus niger KYF3|type=CDS|length=3312bp|location=Sequence derived from alignment at ch4:5386849..5388098+ (Aspergillus niger KYF3)
ATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGA
CAAGTGGAAGGTCGAACCCTTCCAAGCCGAAGACAATGTCGCCGGTAGTT
TCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCCAAGTACCGTGAAGTC
TACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGCGCTCGAGAAATTCGG
TATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCATGACAGTCAAGACGA
CCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAGGCCCGTGACTTGATC
AAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGGCCCTCAAAATCCTCGA
AGACGACGTCGCATGCGACATCATCAAGATCCGCAACCAAGTCCGCAACA
AGGAGCGCTTCGTTAAGCGTCGTCAACGCATTCTCGGTCCCGGTGGATCC
ACCCTGAAAGCCTTGGAGCTGCTCACAAGCACCTACATCCTGGTCCAGGG
TAACACGGTCTCCGCCATGGGCCCCTACAAGGGTCTCAAGGAAGTCCGTC
GCATCATCAACGACTGCATGGCCAACATCCACCCGATCTACCACATTAAG
GAACTCATGATCAAGCGCGAATTGGCCAAGGACCCGACCCTGGCGAACGA
ATCCTGGGACCGCTTCCTGCCTAACTTCAAGAAGCGCACGCTGTCCAAGC
GTCGCGTGCCGTTCAAGGTCACCGACAAGACGAAGAAGGTGTACACTCCT
TTCCCGCCGGCGCCGGAGAAGAGCAAGGTGGATCTCCAGATCGAGTCGGG
CGAGTACTTCCTGTCCAAGGAGGCGAAGGATCGGCAGCAGAAGGAGGAGG
TCATGGAGAGACAGCGGTTGAAGCGCGAAGAGAAGATGAAGGAGCGCGAG
AAGGCGTTCGTGCCGCCCGAGGAGCTGGACGCAGAGGAGAAGAAGAAGGA
AAAGAAGGAGAAGAAGGAGAAGAAAGAGAAGAAGAAGCGGAAGCGCGATT
CCGAGGCCGCGGATGTAGATGGCGACGATGGTGCCGAGAAGAAGGAAAAG
AAGAAGAAGAAGAAGTCCAAGTCGAAAGAGGATGCGTCGGATGGAGAGGC
GTGAATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACA
TTGACAAGTGGAAGGTCGAACCCTTCCAAGCCGAAGACAATGTCGCCGGT
AGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCCAAGTACCGTGA
AGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGCGCTCGAGAAAT
TCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCATGACAGTCAAG
ACGACCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAGGCCCGTGACTT
GATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGGCCCTCAAAATCC
TCGAAGACGACGTCGCATGCGACATCATCAAGATCCGCAACCAAGTCCGC
AACAAGGAGCGCTTCGTTAAGCGTCGTCAACGCATTCTCGGTCCCGGTGG
ATCCACCCTGAAAGCCTTGGAGCTGCTCACAAGCACCTACATCCTGGTCC
AGGGTAACACGGTCTCCGCCATGGGCCCCTACAAGGGTCTCAAGGAAGTC
CGTCGCATCATCAACGACTGCATGGCCAACATCCACCCGATCTACCACAT
TAAGGAACTCATGATCAAGCGCGAATTGGCCAAGGACCCGACCCTGGCGA
ACGAATCCTGGGACCGCTTCCTGCCTAACTTCAAGAAGCGCACGCTGTCC
AAGCGTCGCGTGCCGTTCAAGGTCACCGACAAGACGAAGAAGGTGTACAC
TCCTTTCCCGCCGGCGCCGGAGAAGAGCAAGGTGGATCTCCAGATCGAGT
CGGGCGAGTACTTCCTGTCCAAGGAGGCGAAGGATCGGCAGCAGAAGGAG
GAGGTCATGGAGAGACAGCGGTTGAAGCGCGAAGAGAAGATGAAGGAGCG
CGAGAAGGCGTTCGTGCCGCCCGAGGAGCTGGACGCAGAGGAGAAGAAGA
AGGAAAAGAAGGAGAAGAAGGAGAAGAAAGAGAAGAAGAAGCGGAAGCGC
GATTCCGAGGCCGCGGATGTAGATGGCGACGATGGTGCCGAGAAGAAGGA
AAAGAAGAAGAAGAAGAAGTCCAAGTCGAAAGAGGATGCGTCGGATGGAG
AGGCGTGAATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGAT
GACATTGACAAGTGGAAGGTCGAACCCTTCCAAGCCGAAGACAATGTCGC
CGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCCAAGTACC
GTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGCGCTCGAG
AAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCATGACAGT
CAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAGGCCCGTG
ACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGGCCCTCAAA
ATCCTCGAAGACGACGTCGCATGCGACATCATCAAGATCCGCAACCAAGT
CCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCAACGCATTCTCGGTCCCG
GTGGATCCACCCTGAAAGCCTTGGAGCTGCTCACAAGCACCTACATCCTG
GTCCAGGGTAACACGGTCTCCGCCATGGGCCCCTACAAGGGTCTCAAGGA
AGTCCGTCGCATCATCAACGACTGCATGGCCAACATCCACCCGATCTACC
ACATTAAGGAACTCATGATCAAGCGCGAATTGGCCAAGGACCCGACCCTG
GCGAACGAATCCTGGGACCGCTTCCTGCCTAACTTCAAGAAGCGCACGCT
GTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGACAAGACGAAGAAGGTGT
ACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCAAGGTGGATCTCCAGATC
GAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCGAAGGATCGGCAGCAGAA
GGAGGAGGTCATGGAGAGACAGCGGTTGAAGCGCGAAGAGAAGATGAAGG
AGCGCGAGAAGGCGTTCGTGCCGCCCGAGGAGCTGGACGCAGAGGAGAAG
AAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAAGAGAAGAAGAAGCGGAA
GCGCGATTCCGAGGCCGCGGATGTAGATGGCGACGATGGTGCCGAGAAGA
AGGAAAAGAAGAAGAAGAAGAAGTCCAAGTCGAAAGAGGATGCGTCGGAT
GGAGAGGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KRR1KYF_005974Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005974-T1.exon1KYF_005974-T1.exon1Aspergillus niger KYF3exon
KYF_005974-T1.exon2KYF_005974-T1.exon2Aspergillus niger KYF3exon
KYF_005974-T1.exon3KYF_005974-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005974-T1.cdsKYF_005974-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005974-T1KYF_005974-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263CG4
DBxrefInterPro:IPR041174
DBxrefInterPro:IPR024166
DBxrefInterPro:IPR036612
DBxrefInterPro:IPR004087
DBxrefPFAM:PF17903
Productribosomal RNA assembly protein krr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5386849..5388098 +
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