You are here

KJC3_000175-T1, KJC3_000175-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000175-T1
Unique NameKJC3_000175-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:146029..147151-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000175-T1 ID=KJC3_000175-T1|Name=KJC3_000175-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1123bp|location=Sequence derived from alignment at ch1:146029..147151- (Aspergillus niger KJC3)
GCAACTCTCTGACACACTGTGATTCCAGCACAAGTTGGCCTTACAGGCAC AGCGCTTAGGGCGGTCCATTGATCTGCATGGTGTAGTTGGGCGATTCATC TGGACCACCCAGACAGTGAAGACACTTAATGCCAACCCTTCTTTAGACAT AGTAAGATGTTAATTGGCCTAGACAAGGGTAAATTAATGTAGGTCAGACC ATTGCCCATCCTTATCTGAAGTGGACAATGCTAGCCTAAAGAAATTCTAA TTAATTGATATTAGAGAATCGTTCCTAACTCGCATAATAGCGCATGCCGG TCAGCGCCAAACATCGCTGGAGCCTGGCTTACTGGGCAGCGTACGAATAG CTCCGTCAAAGCTTTAGTTGACGCTGAGTCTTGGATGTGCCCATCACAAT GTACTTGCACCAGGAGTATTTTTTTGAGTTAACATGAATAGTATTCTAAT GACGAGGTACACAGATTAGAGAGCTATAAGTGTTGTAGAGGCTCGCGACA TGTTAATATAAATACTTTGTCTTCATCCGGCCTTACTTGGGGCTACCGGA GAATGCCAAAGAGACAAAAACCTACTACAGAGTACGTAAATCATGAAACT TGCTTCTTTGATATGATACTATGATACTGAACAGACTCTAGTAGAGCCAG TACACCAACTAAAGCATACGAACATGTCTGCTCCATCAAATAACGAAGCG AAGAAGGTGGAGGAACCACCAAGCCCTACAGCCCGCTCCAGGACTGAATT TGAACTGGGTATCGACCGTGTCCAGTACGATGTGCTGGAGGAGGCGGCAA CCAAATCACTGGAGCGCAGAAAGAAGGCCAAACCCAAACCGGAATATTTT GTCGGCCCAGTCGAAAGACTGACTCTTAACAATGCCGGCAAATCGTCCCT CGAAAGACGCCAGAACGAAGATTTCGCCAAGCATGCAACTGAAAAGGTGG CAAATGAGTACAAAAACTGATTTGACGTGGGGTGTGGTTGGTGTGTCACA GGAAAGGAAAGTAAGGTTGCTGCGCCACCGCCCGGCGATGTGGACACTAG GGGTGGAAGCCAGATTATACAGCACACATGTTCTGTACACACTCGTTTAT ACTATTTGATATCGAGACCTTGG
back to top

Coding sequence (CDS) from alignment at ch1:146029..147151-

>KJC3_000175-T1 ID=KJC3_000175-T1|Name=KJC3_000175-T1|organism=Aspergillus niger KJC3|type=CDS|length=297bp|location=Sequence derived from alignment at ch1:146029..147151- (Aspergillus niger KJC3)
ATGTCTGCTCCATCAAATAACGAAGCGAAGAAGGTGGAGGAACCACCAAG
CCCTACAGCCCGCTCCAGGACTGAATTTGAACTGGGTATCGACCGTGTCC
AGTACGATGTGCTGGAGGAGGCGGCAACCAAATCACTGGAGCGCAGAAAG
AAGGCCAAACCCAAACCGGAATATTTTGTCGGCCCAGTCGAAAGACTGAC
TCTTAACAATGCCGGCAAATCGTCCCTCGAAAGACGCCAGAACGAAGATT
TCGCCAAGCATGCAACTGAAAAGGTGGCAAATGAGTACAAAAACTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000175KJC3_000175Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000175-T1KJC3_000175-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000175-T1.cdsKJC3_000175-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000175-T1.utr3p1KJC3_000175-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000175-T1.exon4KJC3_000175-T1.exon4Aspergillus niger KJC3exon
KJC3_000175-T1.exon3KJC3_000175-T1.exon3Aspergillus niger KJC3exon
KJC3_000175-T1.exon2KJC3_000175-T1.exon2Aspergillus niger KJC3exon
KJC3_000175-T1.exon1KJC3_000175-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000175-T1.utr5p4KJC3_000175-T1.utr5p4Aspergillus niger KJC3five_prime_UTR
KJC3_000175-T1.utr5p3KJC3_000175-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_000175-T1.utr5p2KJC3_000175-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000175-T1.utr5p1KJC3_000175-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:146029..147151 -