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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:147658..148611+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000176-T1 ID=KJC3_000176-T1|Name=KJC3_000176-T1|organism=Aspergillus niger KJC3|type=mRNA|length=954bp|location=Sequence derived from alignment at ch1:147658..148611+ (Aspergillus niger KJC3)
GCCGTGATAAAGACAATGCTCTTCGCAGAATCTATTCAGACACACTTAGT
TCTCTAGACCTGAAGGCAGTATGAGTTCTCTGCAGGCAATTCTTGACGCC
GTCTCAACTTTGTCCAATATACCGGAGGTACAAAGAGATGACCTCCTTGT
ACACCGTGACAAGCTTGTGATGGCTCTTCGCACACTACAGTCTCTTCTAC
AGATGCCATGCGGGTCGACCGCAACGTTTGAAAGCTCCAAAGAATTCCAA
TGCTCTCCTATTTATCAATGTGCAAGCCCAGAAGCGTCATCTCCAGCGTC
ATCTCCAGCGTCATCTCCAGCAGTGCCCGCTCCAGCCACATCATCCAGGG
CAGTGTCATCTCCAGCGTCATCTCCAGCAGTGCCCGCTCCAGCAGTGCCC
GCTCCAGCCACATCATCCAGGGCAGTGTCATCTCCAGCGTCATCTCCGGC
AGTGCCCGCTCCAGCAGTGCCCGCTCCAGCCACATCATCCAGGGCAGTGT
CATCTCCAGCGTCATCTCCAGCAGTGCCCGCTCCAGCCACATCATCCAGG
GCAGTGTCATCTCCAGCGTCATCTCCAGCGTCATCTCCAGCGTCATCTCC
AGCAGCGCCCGCTCCAGCCACATCATCCAGGGCAGTGTCATCTCTAGCGT
CATCTCCAGCAGCGCCCGCTCCAGCCACATCATCCAGGGCAGTGTCATCT
CCAGCGTCATCTCCAGTGTCATCTCCAGCGTCATCTCCAGCAGCGCCCGC
TCCAGCCACATCATCCAGGGCAGTGTCATCTCTAGCGTCATCTCCAGCAG
CGCCCGCTCCAGCCACATCATCCAGGGCAGTGTCATCTCCAGAGTCATCT
CCAGCGTCATCTCCAGCGTCATCTCCAGCGTCATCTCCAGCGTTATCTCC
AGCGTCATCCTCGGAAACGCCCCCGGCAGCAGGTTCCATTCATCCTACCA
TTGA back to topCoding sequence (CDS) from alignment at ch1:147658..148611+ >KJC3_000176-T1 ID=KJC3_000176-T1|Name=KJC3_000176-T1|organism=Aspergillus niger KJC3|type=CDS|length=705bp|location=Sequence derived from alignment at ch1:147658..148611+ (Aspergillus niger KJC3)
ATGCTCTCCTATTTATCAATGTGCAAGCCCAGAAGCGTCATCTCCAGCGT
CATCTCCAGCGTCATCTCCAGCAGTGCCCGCTCCAGCCACATCATCCAGG
GCAGTGTCATCTCCAGCGTCATCTCCAGCAGTGCCCGCTCCAGCAGTGCC
CGCTCCAGCCACATCATCCAGGGCAGTGTCATCTCCAGCGTCATCTCCGG
CAGTGCCCGCTCCAGCAGTGCCCGCTCCAGCCACATCATCCAGGGCAGTG
TCATCTCCAGCGTCATCTCCAGCAGTGCCCGCTCCAGCCACATCATCCAG
GGCAGTGTCATCTCCAGCGTCATCTCCAGCGTCATCTCCAGCGTCATCTC
CAGCAGCGCCCGCTCCAGCCACATCATCCAGGGCAGTGTCATCTCTAGCG
TCATCTCCAGCAGCGCCCGCTCCAGCCACATCATCCAGGGCAGTGTCATC
TCCAGCGTCATCTCCAGTGTCATCTCCAGCGTCATCTCCAGCAGCGCCCG
CTCCAGCCACATCATCCAGGGCAGTGTCATCTCTAGCGTCATCTCCAGCA
GCGCCCGCTCCAGCCACATCATCCAGGGCAGTGTCATCTCCAGAGTCATC
TCCAGCGTCATCTCCAGCGTCATCTCCAGCGTCATCTCCAGCGTTATCTC
CAGCGTCATCCTCGGAAACGCCCCCGGCAGCAGGTTCCATTCATCCTACC
ATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000176-T1.utr5p1 | KJC3_000176-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:147658..148611 + |
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