You are here

Home

KJC3_000371-T1, KJC3_000371-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000371-T1
Unique NameKJC3_000371-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:677013..679969+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000371-T1 ID=KJC3_000371-T1|Name=KJC3_000371-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2957bp|location=Sequence derived from alignment at ch1:677013..679969+ (Aspergillus niger KJC3)
CTCTTCTCTTTTGCCTGCAAGATTGGCACTCCTAATGCAGAGTCCAGCGC
AGTATCCCTGTCATCATGGCCAGTCTGACCACCATTCAGGAGGCAGTGAG
AGTTATTTAGCGGCGGCTGAGTTCCTCCTCGCTGACAATGGGCTTCGGGG
GATTGTTGAGAGGGACTTGATAATCCCAGTGGTTTATCCTCCCATCCATT
GTCATTCTCCGATCTTTGTATCTTCTATGGGACGATCACTACCACCATGT
CGGCGACAATGTCCTCATCGCCCTCCGCCCGCTCTTCGACGCTAACTCCG
GCGGAGCTGGCCGAGTGGTCGCAGTCCCTCAAGCCGGTGGTGTTGGGTCC
CAGTATCACCATGGTGGTACTTGGCAATCTGGGTGTGATGCTGCGTATCT
GGGCCCAACGGCGCATTCACAAACGTCCCGTGCAGGAGGACTATTGGCTG
ATCATGGCCGTTGTATGTTATCTTTCTTTCGCCGCTCTGTCGACCCATCT
CAATCAACTCGGTCAATAACCCCTCATATCTGTCTCTAGCTCTTTTCCAA
CGTGGGCTCGATCGCCGTCCTAGTTGCGGTGCATTTTGGATTGGGGTACC
ATCAGTTCCGCGTCAACGCTGAGGATCCATCGCTGCGTTCCCTGCAGTGG
ATCTTCTTGTGCATGTGGCTCACGGCTACCTTCAACGGGCCCTCCATGCT
GGCCACCAAGATTGCCCTGCTCCTCTACTACCGCCGGCTGTTCATCGTGC
AGCAGATCTGGCTGCGTATCTTTTGGTGGACCAATGTTGTGTACGTGGTG
CTCTGGGGCATCGGCTCGACCATCACATATATGCTCTCGTGCGTGCCAGC
CAGCTACTACTGGGAGCGTTTCAACCCGGAGTCGACGATGCACGGCAGCT
GCCGCAACACCACCAACGCCGACGGCGTGCCGCTCATTCTGGACCTGATC
TCCGACGTCGCGATCCTGGCGCTGCCCATTGCTACCATCGCCACCCTGCA
GATGCCGCTAGCCCGCAAAGCTGGGCTCATCATCGTGTTCTCGGTCGGAT
TCCTGTACGTTCCCCTGAATGAGATTCCCTGTTATGTATAGCTAGCTTAA
CTCACTCCGCAGTGCCATTGTATCCGCGGTCGCCCGCGTCGTCGTGCTCT
ACAAGGCCACGAGCCTGCACACGGACTTCCCCTACGCAGCTGCCCCCTTC
GAGATGCTGGTCGTGATCCAGCTCAACATGGCTATCGTGTGCGCAACCGC
GGTGCCCATCGCCTCGGGCTTCCGGGTGGCCTTCAGCAAGAAGCGCCGCC
GCGACAAGAGCTGGATGGCAAAAGGCGTGAGCGGGAATACGTCCAGCAGC
CACGCCTCGGCGGCGGCGCGGGCCGCACGCCTGCGGCTCGAGGAAGAGGC
CAGCAGCAGCACCGAACAGCTGCATATGGGGCACTTCACCACCAGCTGTG
CCTCCAAGGGGCCGGAAGATCGGGCGCGGGGAGAAGAGCCCGTGACAGGG
AATGGGATTATGGTGAAGATGGATGTGGATATTCGATAGTATAGTACTTC
TACCATACAGTTACATAGACACGCAGTGGGAAACATATACCCTAATACTA
ACCCCCAAACCACCCTCAAAAGCCACTCACTCCACCCTCGTAGCACACCA
CCAAATAATCCTGGCATTATCATCCATAAAACTCGCCTTATTCCTCATTT
TCAGCGTCGTCTCCCCGACCTCCAACTCCGCCTGCACCTCCCACTTCATC
CCCAACTTCTCCCCAACCTCCTTCCAAAAGCCCTGCAAACTCCCCACATC
ATGCCTATAATGCAGCATCGTCTCTTCCGTGAACCCCTTCAAATCATACA
CCCCGGCTACCGTACTCCCCATCTGCCTCCCACAAACCACCGTTCCGATC
TGCCCCCTCGTCAACCCAATCAACCGTTTCACACCACGCACCTGCCCCTC
ATAATCCCAGAAATGCAGCAACGAGCCGGCCCAAACAACATCAATCTTCC
CCTTCATCGTCCCCACAATCTCGCCCGACTCCCACTCCTCGTCCGACACA
CCTAGATCCGCGCCCACAAATGTAGCGGGGAACGAGTCGGTATTGTCTCG
GAAGAGCTTGTACCCGAGCTCGAAGAACCCGGGTTCTAGATCGAAGCCGT
ATAATTGCGAGGGCGGGATCGAGGCCGCGTAGACTAAGTGTCGGAGCTCT
TGGCCGACGCAGCAGCCGGCGTCGAGGAAGCCATTGTCTGGGGAGGCGCG
CAGGCGGGACAGGACCTGTGGGTAGAAGGGGAGGCGGGAGAGGTGGCAGC
TTAGGAAGCGCATTTGGCCGATGCAGGGGTAGGGGAAGATGCGGAAGGCT
TCATCTCGCTGTTCACTCAAGTGGTTTCGGTTAGAGTTAGGGGGATGTCA
TCCTGGGTTGGAGATAGTCCTCGGGGGTATGGGTGCCTACCAGGGCTAAG
ACATGGGGAATGATCTCTTCGGGTGTGAGTCCGCTGTAATTCTCTAGCAT
TGACTGCGCAGCGGGGTCGATGGCCGTGACGCTGGTTTCGTACCAGGCTG
GCTTGGTGGTGGACATGGTAGGTGAGTCTTGTTGTTGGCTGGAATTAACG
TCGGGGTGGATGGATGGGCTAGGAAGTGAGTTCAGGATATGTGACCGTTA
AGCTTAATTGTAGGGTATGCTTCTCCATAAAAATCTGGAATGTCTAATCC
CGATTGCATCCCCACCGCCGCTTGACCTGCCCCAGAGAATCGGGGTGCTT
TAATAGGGGTATTATGCTACTCCACCTGTTTGTAATGGTAAATGATATGC
ACTGGCTCTCTACTCGGCCTGACTAATTTGTAGAGATTGAAACAATTGAA
AGAAGACACCATCTAGTGTAAAATCCTTCTCTTTCAATTTTCGGCATTGA
TCCAGGAACATAGATAAGCCCTATCACAACATAGATGGACATGCAAAATT
TTTTCCC
back to top

Coding sequence (CDS) from alignment at ch1:677013..679969+

>KJC3_000371-T1 ID=KJC3_000371-T1|Name=KJC3_000371-T1|organism=Aspergillus niger KJC3|type=CDS|length=1638bp|location=Sequence derived from alignment at ch1:677013..679969+ (Aspergillus niger KJC3)
ATGTGGCTCACGGCTACCTTCAACGGGCCCTCCATGCTGGCCACCAAGAT
TGCCCTGCTCCTCTACTACCGCCGGCTGTTCATCGTGCAGCAGATCTGGC
TGCGTATCTTTTGGTGGACCAATGTTGTGTACGTGGTGCTCTGGGGCATC
GGCTCGACCATCACATATATGCTCTCGTGCGTGCCAGCCAGCTACTACTG
GGAGCGTTTCAACCCGGAGTCGACGATGCACGGCAGCTGCCGCAACACCA
CCAACGCCGACGGCGTGCCGCTCATTCTGGACCTGATCTCCGACGTCGCG
ATCCTGGCGCTGCCCATTGCTACCATCGCCACCCTGCAGATGCCGCTAGC
CCGCAAAGCTGGGCTCATCATCGTGTTCTCGGTCGGATTCCTTGCCATTG
TATCCGCGGTCGCCCGCGTCGTCGTGCTCTACAAGGCCACGAGCCTGCAC
ACGGACTTCCCCTACGCAGCTGCCCCCTTCGAGATGCTGGTCGTGATCCA
GCTCAACATGGCTATCGTGTGCGCAACCGCGGTGCCCATCGCCTCGGGCT
TCCGGGTGGCCTTCAGCAAGAAGCGCCGCCGCGACAAGAGCTGGATGGCA
AAAGGCGTGAGCGGGAATACGTCCAGCAGCCACGCCTCGGCGGCGGCGCG
GGCCGCACGCCTGCGGCTCGAGGAAGAGGCCAGCAGCAGCACCGAACAGC
TGCATATGGGGCACTTCACCACCAGCTGTGCCTCCAAGGGGCCGGAAGAT
CGGGCGCGGGGAGAAGAGCCCGTGACAGGGAATGGGATTATGGTGAAGAT
GGATGTGGATATTCGATAGATGTGGCTCACGGCTACCTTCAACGGGCCCT
CCATGCTGGCCACCAAGATTGCCCTGCTCCTCTACTACCGCCGGCTGTTC
ATCGTGCAGCAGATCTGGCTGCGTATCTTTTGGTGGACCAATGTTGTGTA
CGTGGTGCTCTGGGGCATCGGCTCGACCATCACATATATGCTCTCGTGCG
TGCCAGCCAGCTACTACTGGGAGCGTTTCAACCCGGAGTCGACGATGCAC
GGCAGCTGCCGCAACACCACCAACGCCGACGGCGTGCCGCTCATTCTGGA
CCTGATCTCCGACGTCGCGATCCTGGCGCTGCCCATTGCTACCATCGCCA
CCCTGCAGATGCCGCTAGCCCGCAAAGCTGGGCTCATCATCGTGTTCTCG
GTCGGATTCCTTGCCATTGTATCCGCGGTCGCCCGCGTCGTCGTGCTCTA
CAAGGCCACGAGCCTGCACACGGACTTCCCCTACGCAGCTGCCCCCTTCG
AGATGCTGGTCGTGATCCAGCTCAACATGGCTATCGTGTGCGCAACCGCG
GTGCCCATCGCCTCGGGCTTCCGGGTGGCCTTCAGCAAGAAGCGCCGCCG
CGACAAGAGCTGGATGGCAAAAGGCGTGAGCGGGAATACGTCCAGCAGCC
ACGCCTCGGCGGCGGCGCGGGCCGCACGCCTGCGGCTCGAGGAAGAGGCC
AGCAGCAGCACCGAACAGCTGCATATGGGGCACTTCACCACCAGCTGTGC
CTCCAAGGGGCCGGAAGATCGGGCGCGGGGAGAAGAGCCCGTGACAGGGA
ATGGGATTATGGTGAAGATGGATGTGGATATTCGATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000371KJC3_000371Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000371-T1.utr5p1KJC3_000371-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000371-T1.exon1KJC3_000371-T1.exon1Aspergillus niger KJC3exon
KJC3_000371-T1.exon2KJC3_000371-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000371-T1.cdsKJC3_000371-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000371-T1.utr3p1KJC3_000371-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000371-T1KJC3_000371-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:677013..679969 +
Powered by Drupal