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KJC3_000488-T1, KJC3_000488-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000488-T1
Unique NameKJC3_000488-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1005828..1008210-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000488-T1 ID=KJC3_000488-T1|Name=KJC3_000488-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2383bp|location=Sequence derived from alignment at ch1:1005828..1008210- (Aspergillus niger KJC3)
CAGAAATCTCGCATTTTCTCGATCAATTGGGACCCATGAACTCATCAGCA
GAGCGGACTAACGCTCCACCGCGGCGGAAGTCTTGCGAGGCCTGCAAAAT
CGCCAAGCGACGCTGTGATCTCGCCTGGCCAGCCTGCTTCCGATGTGCCC
GCCGCAACCAAGCCTGTATCTACCCTGGCAGACAACCACAAAGCATGGAC
GTACAGGCAACATCGCTTGCAATGAATTTATTGGAAGACCCTTCGTTACC
GGTTCATGCCGAAGCCCAGTGTGTGCCCGATATCCACTTGCACCTCCCTG
AGGTAGACTCATTATGTGCTCTTGAGCTTCCCACTCCTGAAACGGAAGTA
ACCAACCTTTTGGCCCAATGCCCGCCTCTGGAAATCCCTGGATTATCGTT
GACACAGGAAGGTCCGGGTCCCACTCTGATTAGAACGAGGTCTTCGCTGT
CTATCTCGGCTATTGTAACGGAGCGCTTACAATTCGGCATGGATGTGCTG
AAACAAGCACCAAGAATGATGGTCCTAGAAAACCAGACGCCCTGGTGCCA
TCGCCAGTTGTACAAAGATGGCATGCCCAGGTCAATGCAAGGTACGTTTG
TAGCACCTCACCTATGCTCTATGCTAAGAAATGCAGACGCCGTCGCCTGC
TGCGCCCTGTACATGGCTCGAAATGAAATCAATGCTCCAGTCATCCTCTC
TTCCTTCAAAACCCGCATTGACGATTTGCTCGCTTCCCCGCCTCCAAAAA
CACCGCTCGAAGCACTCGCCCATACACAGTCCCTGATACTGTATCAGATA
ATGCGCCTGTTCGACGGAGACATCCACGCCCGGCTGTCCGCCGAACCTCT
CATTCCTATGCTGGAAACATCGGCCTTCAGCCTTCTGAACTATGTTTACT
TCCCGGCCGCAGAGCCCGACACTGCCCTTACTGCGCCCATGGATGCTGTC
ATGCAGTCCTGGACAGAGTGGGTATACCAAGAATCTGCGCGTCGCACCGC
CCTCTTCACGTTCTATCTGGTGCAAATATACCGCTTAGTCACAGGCGAGA
ACAACCTCAGCTGCGACGGCCGTTTGGGCCTCATCCACTCATGGTATTTA
TCCGCGTATCTGTGGAGTGCGCAGACTGCATTCGACTTTGCCGTTGCATG
GAACGAGAACCAGCATTTTGTGGTCTGCAATGCAGATTTTGGCCATGTGC
TTGAACGCGCGCGGCCGTCTGATGTGGATGTCTTTGGACGGATGCTCCTC
AGTACGCTTTTAGGAATCGATCAGGCCAAGGCCTGGTTTTACTCCCGAGG
AGCTATTTTGTAACCTCATAAAATCGAACGGCACATATTGCATCGATACT
GCATCACCACCTAAGATCGACCTTCGATCTCCACGGAGCACACAGACTTT
GGCTCCCATGCGGTTCGGGCGGATATCCCTCCGGCATCCGTCTCCGGCCT
TTCCAGTTTTGGATTAGCGGTATGGCACCGCCCTGCTTGCTGCCCCTGAG
CCCAGCCCATGTTCCTTGCCCGCTGCTTAGCACCAAATTTGTGTCATACC
ACATCTTCGCGGCTGGCCGGGAACTACAATAGTGCATGCGAGGGACTAGA
AGAGCCTGGGTATTGAAGAGCAGGTCAAGGTCAGACTAGTCATAGCGAGG
TCAATGCTTCAAATGCATTGCAGCTTCTCCGGTGTCCTGGAATGCTGGGG
GCGCTAATGCAAGGCCATGTGACTTGGCCAGCCTGACAGTCAACTGCAGT
CTCCAATTAGCCCCAAGGCGCTCTGGTGCTGATGAGGTATGGTGTCCTCT
GAAGCTGTCGCTTCAGCTAAACCCATAATGATTTGATCGGTACCATCCAT
GAAAATATCGGTTTCCCCATCGTATTGCGGTCCCTGGAATCGGCAGTGGG
GTTCGACCGGTCATTAATGATTCTTAGCGTACTTCGTCATGACATACCGT
AACAGCCTTGAAGGCCAGCCTTGCGCTGTGTCGATGGAAGAAACTGGGTG
ATGGGGCTCTTACAAAGCCAATCAAGCATTCTAAGTCGTCTTTCCTTGCC
CGCCATCATCATCATTCAGAAGCTGCACTCTCCGATACATCGTGAGGGCG
AGCTGAGAATTACTGTGCTCGTATTGCCAGTGGATAGAACTCCCCCATGA
CTATTACATTCCGTCGGGGACAATATTCTCTTAAACATGATGTTATAGCG
GTTGATACACTAGCTTTATCGTTTATTAGAAAATTGTTTCGGAATCTAGT
TCGGATGGCGAGTCGGACGCTAATTCGGAATTTGCTTCGGACAATGGCCT
TTGCTGATGGACTGGAGGGCCCCCCACCGTATCCACAAAGCTAGTCAAAG
GCTTGTTCCTTATGAAGTCAATGTGTTGATGGA
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Coding sequence (CDS) from alignment at ch1:1005828..1008210-

>KJC3_000488-T1 ID=KJC3_000488-T1|Name=KJC3_000488-T1|organism=Aspergillus niger KJC3|type=CDS|length=2466bp|location=Sequence derived from alignment at ch1:1005828..1008210- (Aspergillus niger KJC3)
ACGCCGTCGCCTGCTGCGCCCTGTACATGGCTCGAAATGAAATCAATGCT
CCAGTCATCCTCTCTTCCTTCAAAACCCGCATTGACGATTTGCTCGCTTC
CCCGCCTCCAAAAACACCGCTCGAAGCACTCGCCCATACACAGTCCCTGA
TACTGTATCAGATAATGCGCCTGTTCGACGGAGACATCCACGCCCGGCTG
TCCGCCGAACCTCTCATTCCTATGCTGGAAACATCGGCCTTCAGCCTTCT
GAACTATGTTTACTTCCCGGCCGCAGAGCCCGACACTGCCCTTACTGCGC
CCATGGATGCTGTCATGCAGTCCTGGACAGAGTGGGTATACCAAGAATCT
GCGCGTCGCACCGCCCTCTTCACGTTCTATCTGGTGCAAATATACCGCTT
AGTCACAGGCGAGAACAACCTCAGCTGCGACGGCCGTTTGGGCCTCATCC
ACTCATGGTATTTATCCGCGTATCTGTGGAGTGCGCAGACTGCATTCGAC
TTTGCCGTTGCATGGAACGAGAACCAGCATTTTGTGGTCTGCAATGCAGA
TTTTGGCCATGTGCTTGAACGCGCGCGGCCGTCTGATGTGGATGTCTTTG
GACGGATGCTCCTCAGTACGCTTTTAGGAATCGATCAGGCCAAGGCCTGG
TTTTACTCCCGAGGAGCTATTTTGTAAATGAACTCATCAGCAGAGCGGAC
TAACGCTCCACCGCGGCGGAAGTCTTGCGAGGCCTGCAAAATCGCCAAGC
GACGCTGTGATCTCGCCTGGCCAGCCTGCTTCCGATGTGCCCGCCGCAAC
CAAGCCTGTATCTACCCTGGCAGACAACCACAAAGCATGGACGTACAGGC
AACATCGCTTGCAATGAATTTATTGGAAGACCCTTCGTTACCGGTTCATG
CCGAAGCCCAGTGTGTGCCCGATATCCACTTGCACCTCCCTGAGGTAGAC
TCATTATGTGCTCTTGAGCTTCCCACTCCTGAAACGGAAGTAACCAACCT
TTTGGCCCAATGCCCGCCTCTGGAAATCCCTGGATTATCGTTGACACAGG
AAGGTCCGGGTCCCACTCTGATTAGAACGAGGTCTTCGCTGTCTATCTCG
GCTATTGTAACGGAGCGCTTACAATTCGGCATGGATGTGCTGAAACAAGC
ACCAAGAATGATGGTCCTAGAAAACCAGACGCCCTGGTGCCATCGCCAGT
TGTACAAAGATGGCATGCCCAGGTCAATGCAAGACGCCGTCGCCTGCTGC
GCCCTGTACATGGCTCGAAATGAAATCAATGCTCCAGTCATCCTCTCTTC
CTTCAAAACCCGCATTGACGATTTGCTCGCTTCCCCGCCTCCAAAAACAC
CGCTCGAAGCACTCGCCCATACACAGTCCCTGATACTGTATCAGATAATG
CGCCTGTTCGACGGAGACATCCACGCCCGGCTGTCCGCCGAACCTCTCAT
TCCTATGCTGGAAACATCGGCCTTCAGCCTTCTGAACTATGTTTACTTCC
CGGCCGCAGAGCCCGACACTGCCCTTACTGCGCCCATGGATGCTGTCATG
CAGTCCTGGACAGAGTGGGTATACCAAGAATCTGCGCGTCGCACCGCCCT
CTTCACGTTCTATCTGGTGCAAATATACCGCTTAGTCACAGGCGAGAACA
ACCTCAGCTGCGACGGCCGTTTGGGCCTCATCCACTCATGGTATTTATCC
GCGTATCTGTGGAGTGCGCAGACTGCATTCGACTTTGCCGTTGCATGGAA
CGAGAACCAGCATTTTGTGGTCTGCAATGCAGATTTTGGCCATGTGCTTG
AACGCGCGCGGCCGTCTGATGTGGATGTCTTTGGACGGATGCTCCTCAGT
ACGCTTTTAGGAATCGATCAGGCCAAGGCCTGGTTTTACTCCCGAGGAGC
TATTTTGTAAATGAACTCATCAGCAGAGCGGACTAACGCTCCACCGCGGC
GGAAGTCTTGCGAGGCCTGCAAAATCGCCAAGCGACGCTGTGATCTCGCC
TGGCCAGCCTGCTTCCGATGTGCCCGCCGCAACCAAGCCTGTATCTACCC
TGGCAGACAACCACAAAGCATGGACGTACAGGCAACATCGCTTGCAATGA
ATTTATTGGAAGACCCTTCGTTACCGGTTCATGCCGAAGCCCAGTGTGTG
CCCGATATCCACTTGCACCTCCCTGAGGTAGACTCATTATGTGCTCTTGA
GCTTCCCACTCCTGAAACGGAAGTAACCAACCTTTTGGCCCAATGCCCGC
CTCTGGAAATCCCTGGATTATCGTTGACACAGGAAGGTCCGGGTCCCACT
CTGATTAGAACGAGGTCTTCGCTGTCTATCTCGGCTATTGTAACGGAGCG
CTTACAATTCGGCATGGATGTGCTGAAACAAGCACCAAGAATGATGGTCC
TAGAAAACCAGACGCCCTGGTGCCATCGCCAGTTGTACAAAGATGGCATG
CCCAGGTCAATGCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000488KJC3_000488Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000488-T1KJC3_000488-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000488-T1.cdsKJC3_000488-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000488-T1.utr3p1KJC3_000488-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000488-T1.exon2KJC3_000488-T1.exon2Aspergillus niger KJC3exon
KJC3_000488-T1.exon1KJC3_000488-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000488-T1.utr5p1KJC3_000488-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1005828..1008210 -
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