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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1935241..1936991+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000783-T2 ID=KJC3_000783-T2|Name=KJC3_000783-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1751bp|location=Sequence derived from alignment at ch1:1935241..1936991+ (Aspergillus niger KJC3)
TATACATCATCACTTTCGCCCTCGCCGTTTGCTGGAGATTCTCTGACGGC
CTCCACATTCTCTCTAGCATATTCCGTCCGACGGTCTTTCGTCAACTTGC
TCGTCCTCTTGTCTAATATTCCTTTGTATTCCATCGCGCATCAATAATGG
GTTGGTTCTGGGCAGACTCTCAAGCAAAGCCCGCGCCCGCGGCTCCGCAC
CCCGTGCCATCTTCAGACGCCTCTCCTCCCGTGAGTAAAGATGCTACTTA
GACGCAATTTCGAGCGAGGAATCTGACGGATGCTTATAGCCAGGATGTCC
CATGCACGCATCTAACACCACGCCGGCAATGCCAGCCCCATCACCCACCT
CCGAGCCTCCCAGTGCCTGTCCGGTCCGGTCTACAGATTCCCCGTTCTAT
GTGCCTCCGAAGTCCAAGTCTCCGGAGTCGCAGCCTCCCTCCAACCCTAC
TACCAGCTCTGACACGCGATCTACTCTTTCAAAGCTAAACCCTCTCAACT
ACATGTTCGCCTCGATCTCCCAGGAAAGGGCGCCCAACCAGACCGTGGAT
CTTCCCGTGGAGCGAGAAGTTTCGTCTATCCCGAGATCCGATATGAATGA
GAACTGGGAATATCCTTCTCCTCAGCAGATGTACAACGCCATGCTGCGCA
AGGGTTATACCGATACCCCGCAGGATGCCGTTGAGGCCATGGTTGCTGTT
CACAACTTCTTGAATGAGGGCGCTTGGGAGGAGATTGTTCGGTGGGAGCG
TATATTTTCCAAGGGTCTGGCAGATGGCTGGGAAAAGTGCCGTCGCGGAG
AGGAGAACATCATGATGGACGAGTTTAAAGAGCAGATGTCCAGCGCTCCC
AAGCAGGATGTTCCTCCGCCGCGACTCATCCGGTTCCAGGGTCGCCCGCA
AGAGCTTACGCCCAAGGCACGGATCCTTCAGGCATTGGGCTGGGTGTATC
CTGCCAAGTTCGAGTCAGTACTCCCATTAGCTCCTGTTTCTTCTCTTCCG
TTCGAAAATTTTAAACTAACATTCGCCTGTTACTGTAGGTCAAACCCACC
CTTCGATCGCCACGATTGGTTCGTAATGCGACAGACGCCTTCCGGCCCTA
AGGAAGTCCGTTATGTTATTGACTACTATTCTGGTCCCCCCGAACCCACC
GGAGAGCCTGTTTTCTACTTGGATATCCGACCGGCCCTGGACACCCCAAC
TGCCGCCGTTGAGCGACTAATGAGATGGGGAGGAGATGTCTGGTGGCGTG
CCAGTGGCGCCTCTGTTCGGGAAAATTAAGTGACTGACTGATTGATCTAT
CAATCGGTTGATTGTCCTTAGCACCGCATGCCCGCGATCTTGGTCGACAG
CCGTTCAGCAGGATACTCTTGACACTCTGGGAAGGCGCAGGCGTCTGGTT
TCGGTTCTTCGTTCATTCTGTGGAACCGCCCTGCTATAGTATTCATGTTC
TTGTTCGTTCGGATCTCCTGGATTGCGCGCCCCTTTCTCTTCATTTCGGC
TATGTCTTTATTATAACGTCATGTGGATGCTGGAGTATCAAGGAAGTTCG
TCATCGTATTGGACGCCTGGGGTTATTTCTTTCTATCGGTTGCATGCTTT
GTCTGGGCTTAAACGCCCCCCCCCCCCCCCCCCCCCCTCTCTGCTCCACT
CTCTTTCCTTTTTGTGGAATCTGTCTTGATATCAATTATCTTGATCTGTA
ATATATATGAAACTACGCTGCCATCAAATCGTGGACGGTGATATGAAAGG
T back to topCoding sequence (CDS) from alignment at ch1:1935241..1936991+ >KJC3_000783-T2 ID=KJC3_000783-T2|Name=KJC3_000783-T2|organism=Aspergillus niger KJC3|type=CDS|length=1806bp|location=Sequence derived from alignment at ch1:1935241..1936991+ (Aspergillus niger KJC3)
ATGCACGCATCTAACACCACGCCGGCAATGCCAGCCCCATCACCCACCTC
CGAGCCTCCCAGTGCCTGTCCGGTCCGGTCTACAGATTCCCCGTTCTATG
TGCCTCCGAAGTCCAAGTCTCCGGAGTCGCAGCCTCCCTCCAACCCTACT
ACCAGCTCTGACACGCGATCTACTCTTTCAAAGCTAAACCCTCTCAACTA
CATGTTCGCCTCGATCTCCCAGGAAAGGGCGCCCAACCAGACCGTGGATC
TTCCCGTGGAGCGAGAAGTTTCGTCTATCCCGAGATCCGATATGAATGAG
AACTGGGAATATCCTTCTCCTCAGCAGATGTACAACGCCATGCTGCGCAA
GGGTTATACCGATACCCCGCAGGATGCCGTTGAGGCCATGGTTGCTGTTC
ACAACTTCTTGAATGAGGGCGCTTGGGAGGAGATTGTTCGGTGGGAGCGT
ATATTTTCCAAGGGTCTGGCAGATGGCTGGGAAAAGTGCCGTCGCGGAGA
GGAGAACATCATGATGGACGAGTTTAAAGAGCAGATGTCCAGCGCTCCCA
AGCAGGATGTTCCTCCGCCGCGACTCATCCGGTTCCAGGGTCGCCCGCAA
GAGCTTACGCCCAAGGCACGGATCCTTCAGGCATTGGGCTGGGTGTATCC
TGCCAAGTTCGAGTCAAACCCACCCTTCGATCGCCACGATTGGTTCGTAA
TGCGACAGACGCCTTCCGGCCCTAAGGAAGTCCGTTATGTTATTGACTAC
TATTCTGGTCCCCCCGAACCCACCGGAGAGCCTGTTTTCTACTTGGATAT
CCGACCGGCCCTGGACACCCCAACTGCCGCCGTTGAGCGACTAATGAGAT
GGGGAGGAGATGTCTGGTGGCGTGCCAGTGGCGCCTCTGTTCGGGAAAAT
TAAATGCACGCATCTAACACCACGCCGGCAATGCCAGCCCCATCACCCAC
CTCCGAGCCTCCCAGTGCCTGTCCGGTCCGGTCTACAGATTCCCCGTTCT
ATGTGCCTCCGAAGTCCAAGTCTCCGGAGTCGCAGCCTCCCTCCAACCCT
ACTACCAGCTCTGACACGCGATCTACTCTTTCAAAGCTAAACCCTCTCAA
CTACATGTTCGCCTCGATCTCCCAGGAAAGGGCGCCCAACCAGACCGTGG
ATCTTCCCGTGGAGCGAGAAGTTTCGTCTATCCCGAGATCCGATATGAAT
GAGAACTGGGAATATCCTTCTCCTCAGCAGATGTACAACGCCATGCTGCG
CAAGGGTTATACCGATACCCCGCAGGATGCCGTTGAGGCCATGGTTGCTG
TTCACAACTTCTTGAATGAGGGCGCTTGGGAGGAGATTGTTCGGTGGGAG
CGTATATTTTCCAAGGGTCTGGCAGATGGCTGGGAAAAGTGCCGTCGCGG
AGAGGAGAACATCATGATGGACGAGTTTAAAGAGCAGATGTCCAGCGCTC
CCAAGCAGGATGTTCCTCCGCCGCGACTCATCCGGTTCCAGGGTCGCCCG
CAAGAGCTTACGCCCAAGGCACGGATCCTTCAGGCATTGGGCTGGGTGTA
TCCTGCCAAGTTCGAGTCAAACCCACCCTTCGATCGCCACGATTGGTTCG
TAATGCGACAGACGCCTTCCGGCCCTAAGGAAGTCCGTTATGTTATTGAC
TACTATTCTGGTCCCCCCGAACCCACCGGAGAGCCTGTTTTCTACTTGGA
TATCCGACCGGCCCTGGACACCCCAACTGCCGCCGTTGAGCGACTAATGA
GATGGGGAGGAGATGTCTGGTGGCGTGCCAGTGGCGCCTCTGTTCGGGAA
AATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005739 | mitochondrion |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004408 | holocytochrome-c synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000783-T2.utr3p1 | KJC3_000783-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000511 |
| DBxref | PFAM:PF01265 |
| Product | variant 2 |
| Product | Cytochrome c1 heme lyase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1935241..1936991 + |
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