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KJC3_000843-T1, KJC3_000843-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000843-T1
Unique NameKJC3_000843-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2103176..2104057+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000843-T1 ID=KJC3_000843-T1|Name=KJC3_000843-T1|organism=Aspergillus niger KJC3|type=mRNA|length=882bp|location=Sequence derived from alignment at ch1:2103176..2104057+ (Aspergillus niger KJC3)
GATTCCCGCTGGACCTCGCATCGCACCGCTACATCCGCCGCTGTGACCTG
ACCGTTCTCCATTGAACTCTCTCCTCCAATCCGTCATCATGGTCGTCTAC
TACCAGATCGCCGGCAAGCAGGTCGGCTCCCACGTTGTACGTCTCCGTTG
CCGCCCTGTCTCAACCCTTCCCCTGTCCGGGACCAATCTCTGCCGAGGTC
ATAACATCGGCCGATGGCACACTCTGCCAGCTGCCTGGGAACTCTCACAC
TGACTACTTGACTATGTATAGCTCGCCATGGGCGTTCTCGGTGCTCTCTT
CGGCGGTGTTGGTCTCGCTACTCGTGGTGGTAGCCAGCCCAAGCCTGCCA
CCCCTCCCATCCAGGCTTCCTCCAAGGATGAGGAGACCTTCATTCAGTAC
GTCTCCACCTTTATAACAGATGAACCTATCTGCAATTAGGACTATGAAGG
ATATGGTTGGAATTTTTGAACTCAAGCTAATGTTTATAACAGGGACTTCT
TGAAACAAGTGAACGGAGAAGAGAAAAAGAAAGACCATTAGAATACCGCT
TTAATACGGGAATCAGTCGAGGGCAACCTTAATTGAAGATGCTCGATGCA
TGATATCCATGACCGAATGGGTCGTTGGTCAGGGTGGTCTGGATTCTACC
CTGACGGGCTCGGGCAGTGTCCTTGAAATCTTGCCTGCTGGGACGGTTTG
GCGGTTCCACGGGAGGTGTGAATCTGTACATATAGAGTATACACCGTGAA
CGTTTGTTCTCCAACTTTGCCGTGTCTGGAACTGGTAAAATCCTTACAAA
GAGCTCCATATCGGTGTAGAAAGTAAGCGTGCGTGAAACAGCCACCAGAT
CATAACCAACAAGAGTATTCATTACCTACTGG
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Coding sequence (CDS) from alignment at ch1:2103176..2104057+

>KJC3_000843-T1 ID=KJC3_000843-T1|Name=KJC3_000843-T1|organism=Aspergillus niger KJC3|type=CDS|length=666bp|location=Sequence derived from alignment at ch1:2103176..2104057+ (Aspergillus niger KJC3)
ATGGTCGTCTACTACCAGATCGCCGGCAAGCAGGTCGGCTCCCACGTTCT
CGCCATGGGCGTTCTCGGTGCTCTCTTCGGCGGTGTTGGTCTCGCTACTC
GTGGTGGTAGCCAGCCCAAGCCTGCCACCCCTCCCATCCAGGCTTCCTCC
AAGGATGAGGAGACCTTCATTCAGGACTTCTTGAAACAAGTGAACGGAGA
AGAGAAAAAGAAAGACCATTAGATGGTCGTCTACTACCAGATCGCCGGCA
AGCAGGTCGGCTCCCACGTTCTCGCCATGGGCGTTCTCGGTGCTCTCTTC
GGCGGTGTTGGTCTCGCTACTCGTGGTGGTAGCCAGCCCAAGCCTGCCAC
CCCTCCCATCCAGGCTTCCTCCAAGGATGAGGAGACCTTCATTCAGGACT
TCTTGAAACAAGTGAACGGAGAAGAGAAAAAGAAAGACCATTAGATGGTC
GTCTACTACCAGATCGCCGGCAAGCAGGTCGGCTCCCACGTTCTCGCCAT
GGGCGTTCTCGGTGCTCTCTTCGGCGGTGTTGGTCTCGCTACTCGTGGTG
GTAGCCAGCCCAAGCCTGCCACCCCTCCCATCCAGGCTTCCTCCAAGGAT
GAGGAGACCTTCATTCAGGACTTCTTGAAACAAGTGAACGGAGAAGAGAA
AAAGAAAGACCATTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000843KJC3_000843Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000843-T1KJC3_000843-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000843-T1.utr5p1KJC3_000843-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000843-T1.exon1KJC3_000843-T1.exon1Aspergillus niger KJC3exon
KJC3_000843-T1.exon2KJC3_000843-T1.exon2Aspergillus niger KJC3exon
KJC3_000843-T1.exon3KJC3_000843-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000843-T1.cdsKJC3_000843-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000843-T1.utr3p1KJC3_000843-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021278
DBxrefPFAM:PF11022
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2103176..2104057 +
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