You are here

Home

KJC3_000858-T1, KJC3_000858-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000858-T1
Unique NameKJC3_000858-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2141689..2144424-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000858-T1 ID=KJC3_000858-T1|Name=KJC3_000858-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2736bp|location=Sequence derived from alignment at ch1:2141689..2144424- (Aspergillus niger KJC3)
CATCATCTTCCCATCCTTCCATCCAGCAGATCACCCCATCATCTTTCCCT
CCCCCTCCCCCTCTCCCTTCCCCCATCATCCCACGCCATCTTCTTCCACT
CTCTGGCTTCCCGACACTAAGCCGGAATTAACTTCGCCGGCCAGATACCC
TTCCTTCTGGCCAGACGCCTTCCCGTCTACCCTCCGACGATCATGTAGCA
AGCTCGGTCTTGCGCCCCTCCGTCAGTGCAACGATGGTGCTCTCCCTATC
TGTCCCCAGCTTCTCTAGATCCACCACCTCCTCTGCGCTTCGTGCCAGTG
AAAGCAGCAATTCCACAACCATCAGCGAGGCTCTCCGCAATAATCCTTTT
GGAATAACCTCACGCTCACGCTCCCTCGCCGCCTCGAATACCACCTCTGA
GGAACAGAAACGAGAACAGGAGGAGCTGAATCAGGCCCTGCAGACCCTAG
CTCGAATCTTTCCCGATATTCGCATCGAAGTCTTCCGAGAACTCCTGGTC
CGATTCGATGGGCAGAGCCGTCTCCATGTCTGCGTCGAGCAGTTGCTACG
TCACAAAGAGACGTGGGTAGCCGGGCGGTGGAACGTGCCAGCTGGGGTTG
GGGGAACGGAAGAAGATGGCAAAAATGATCTACGACATACCGGACACGAT
CAATCAGTTCCGCCTGAGGAGTTGTTCCGGACAAATGAATATAAGGCTGC
CGTGAAGGCGGCTCTCACAAAGGAGTTTAATGGTCTGAGTAAGAGTACGG
TGGAAGCAGTGCTGGCAGAAGTGAATTTCTGTTACTTGCGAGCCCGTCCG
ACTCTGCAAGATCTTTCCCGGAGAACCTGGCGTGCGACCTTCAACAGCAT
TCTTCCTTCGTTCAAGCGCAGTAAAGATAAGAACGAGCACCCGCTAATCG
TGTGGCAGCGTCAACCAGATGGTGACGAGATCCCGCGGCTGAAAAAGACG
GAGTGCCCGGAGTTGGACCGGGAGCTATACCGAGCCCTGCTGGCACCACT
GCTTCGAACCAGACGGGAAGAGAGGCTGGATAGAGACCAGAAGTTAGCGG
AGGAGCTGAACGAAACGGAAGCCAAAGAGGCTGATGCTGTGTATGAGTGC
GAGTGCTGTTTGGATGATGTGACATTCGAGCAAATCTCAACATGCTCGGA
CAATACGCACATTATCTGCTATGGCTGCATCCGGCGAACCATCCACGAGG
CTCTGTTCGGTCAGGGCTGGGGTAAATCGGTCGATGTGGAAAAGTCGACG
TTGAAATGCCTGGCGCCGTTCGACCACGACAGCTGCCCTGGGACCTTGGA
CCCAGCGATCGTCAAGCAGGCTATCTTGCTTGACAAGGCCGGGCTTGAGA
CATTTACCAAATTCGAGACGCGACTTTCCTCCGAGGTTCTGCTCAAGTCC
CAGCTGAAGCTCATTCGATGTCCCTTTTGTTCGTATGCCGAAGTTGATCC
GGTTTACCACCCGTCTGCTCAAGGCCGTGTGTGGCGCTTTCGGCGCGACG
GGTTTATCTCCACGCTTCTGATCACCATCTTCTTACTCGACTTGATACCC
ATACTTATCATTCCTATAGCGATCCTTTATTTTGTCAACTCTTCTGCTGT
CTTTACTATCTTTCAGAACGCCCTTCTCAACCTCTGCCTCAAAACCCGAC
CCAAAAAATTCACCTGCGCGCACCCTGCCTGCCGCCGCGTCAGCTGCATC
ACCTGCCAGAAGCCATGGCGTGACCCTCACGTGTGCCATGAGCCGCTCCT
CCTCGACCTGCGGGCCACCGTCGAGGCCGCTCGCACTGCAGCTGTGAAGC
GCACCTGTCCGCGCTGCGGCCTCTCATTCGTCAAGTCTTCTGGCTGTAAC
AAGCTAACCTGCGTCTGCGGCTACTCCATGTGCTACCTCTGCCGCAAGGC
TCTTGGACCTCCAATCAAGTCCGCAAACCGATTGGGACGACTTCGACCAC
GCCGTCGCGCCAACCTCGTCGAGAACGTTGATCCCGCGGCCGGACCAGAC
GCCATCAACGATGAACTAGAAGCCGGCAACGACGACGAATTCGAAGAAAT
GGAAGGCTACAAGCACTTCTGCGAGCACTTCCGCATCGATCCCGGCTCGC
GCTGCACGGAATGCAACAAATGCGAGCTCTACCAAGACGAAGACGAAGAA
GCTGTGGCGCGTCGTGCCGGCGAGAAAGCCGAACGCGAATGGCACGCTCG
TCAAGGCACCGCCGGTGTGGGCATCGGGACTCTTCGCGTGAATAATGATT
TCTCCAAGGCGGAGGGTAAACGTCGCGGCAATGGTGGGTTGAGTCTTCAT
CATCAGGGCAAGGGCATGAGCTATTGGCTGGATGAGGTGTGGCGGGATGG
TCGATGGCGAATAGAGGGACAGACTTTTGTTGACTGGGTTGTGGAACGAG
TCTTAGTGATTGATGAATTTTAAATCCTCACTTCTCTTATTTTCTAATGC
GTTCGGCGTCTCGGGGTATTTCGGGCATTGTTGATTCAGCTGGTGCAAAA
GAACCATACAGCAGATTGAATGATTGAATGATCGATTAATTGGTTAAATT
GATGTTGCTGCAGCATAGCTAGATTGGATTGGACTAGCTTGATGATAAGA
TGATCAACGACCTGCTTTATAGCAACTTCTTCCGGGAGTTATACTATTAC
TTAAATGAATGTATTATCAAAGATGTCTTGCTTTGCTTGGTAGCAGAGCA
CTACCAACTAACACGAGAAATAAGGAAAAGTACCCG
back to top

Coding sequence (CDS) from alignment at ch1:2141689..2144424-

>KJC3_000858-T1 ID=KJC3_000858-T1|Name=KJC3_000858-T1|organism=Aspergillus niger KJC3|type=CDS|length=2190bp|location=Sequence derived from alignment at ch1:2141689..2144424- (Aspergillus niger KJC3)
ATGGTGCTCTCCCTATCTGTCCCCAGCTTCTCTAGATCCACCACCTCCTC
TGCGCTTCGTGCCAGTGAAAGCAGCAATTCCACAACCATCAGCGAGGCTC
TCCGCAATAATCCTTTTGGAATAACCTCACGCTCACGCTCCCTCGCCGCC
TCGAATACCACCTCTGAGGAACAGAAACGAGAACAGGAGGAGCTGAATCA
GGCCCTGCAGACCCTAGCTCGAATCTTTCCCGATATTCGCATCGAAGTCT
TCCGAGAACTCCTGGTCCGATTCGATGGGCAGAGCCGTCTCCATGTCTGC
GTCGAGCAGTTGCTACGTCACAAAGAGACGTGGGTAGCCGGGCGGTGGAA
CGTGCCAGCTGGGGTTGGGGGAACGGAAGAAGATGGCAAAAATGATCTAC
GACATACCGGACACGATCAATCAGTTCCGCCTGAGGAGTTGTTCCGGACA
AATGAATATAAGGCTGCCGTGAAGGCGGCTCTCACAAAGGAGTTTAATGG
TCTGAGTAAGAGTACGGTGGAAGCAGTGCTGGCAGAAGTGAATTTCTGTT
ACTTGCGAGCCCGTCCGACTCTGCAAGATCTTTCCCGGAGAACCTGGCGT
GCGACCTTCAACAGCATTCTTCCTTCGTTCAAGCGCAGTAAAGATAAGAA
CGAGCACCCGCTAATCGTGTGGCAGCGTCAACCAGATGGTGACGAGATCC
CGCGGCTGAAAAAGACGGAGTGCCCGGAGTTGGACCGGGAGCTATACCGA
GCCCTGCTGGCACCACTGCTTCGAACCAGACGGGAAGAGAGGCTGGATAG
AGACCAGAAGTTAGCGGAGGAGCTGAACGAAACGGAAGCCAAAGAGGCTG
ATGCTGTGTATGAGTGCGAGTGCTGTTTGGATGATGTGACATTCGAGCAA
ATCTCAACATGCTCGGACAATACGCACATTATCTGCTATGGCTGCATCCG
GCGAACCATCCACGAGGCTCTGTTCGGTCAGGGCTGGGGTAAATCGGTCG
ATGTGGAAAAGTCGACGTTGAAATGCCTGGCGCCGTTCGACCACGACAGC
TGCCCTGGGACCTTGGACCCAGCGATCGTCAAGCAGGCTATCTTGCTTGA
CAAGGCCGGGCTTGAGACATTTACCAAATTCGAGACGCGACTTTCCTCCG
AGGTTCTGCTCAAGTCCCAGCTGAAGCTCATTCGATGTCCCTTTTGTTCG
TATGCCGAAGTTGATCCGGTTTACCACCCGTCTGCTCAAGGCCGTGTGTG
GCGCTTTCGGCGCGACGGGTTTATCTCCACGCTTCTGATCACCATCTTCT
TACTCGACTTGATACCCATACTTATCATTCCTATAGCGATCCTTTATTTT
GTCAACTCTTCTGCTGTCTTTACTATCTTTCAGAACGCCCTTCTCAACCT
CTGCCTCAAAACCCGACCCAAAAAATTCACCTGCGCGCACCCTGCCTGCC
GCCGCGTCAGCTGCATCACCTGCCAGAAGCCATGGCGTGACCCTCACGTG
TGCCATGAGCCGCTCCTCCTCGACCTGCGGGCCACCGTCGAGGCCGCTCG
CACTGCAGCTGTGAAGCGCACCTGTCCGCGCTGCGGCCTCTCATTCGTCA
AGTCTTCTGGCTGTAACAAGCTAACCTGCGTCTGCGGCTACTCCATGTGC
TACCTCTGCCGCAAGGCTCTTGGACCTCCAATCAAGTCCGCAAACCGATT
GGGACGACTTCGACCACGCCGTCGCGCCAACCTCGTCGAGAACGTTGATC
CCGCGGCCGGACCAGACGCCATCAACGATGAACTAGAAGCCGGCAACGAC
GACGAATTCGAAGAAATGGAAGGCTACAAGCACTTCTGCGAGCACTTCCG
CATCGATCCCGGCTCGCGCTGCACGGAATGCAACAAATGCGAGCTCTACC
AAGACGAAGACGAAGAAGCTGTGGCGCGTCGTGCCGGCGAGAAAGCCGAA
CGCGAATGGCACGCTCGTCAAGGCACCGCCGGTGTGGGCATCGGGACTCT
TCGCGTGAATAATGATTTCTCCAAGGCGGAGGGTAAACGTCGCGGCAATG
GTGGGTTGAGTCTTCATCATCAGGGCAAGGGCATGAGCTATTGGCTGGAT
GAGGTGTGGCGGGATGGTCGATGGCGAATAGAGGGACAGACTTTTGTTGA
CTGGGTTGTGGAACGAGTCTTAGTGATTGATGAATTTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000858KJC3_000858Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000858-T1.cdsKJC3_000858-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000858-T1.utr3p1KJC3_000858-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000858-T1.exon1KJC3_000858-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000858-T1.utr5p1KJC3_000858-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000858-T1KJC3_000858-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002867
DBxrefPFAM:PF01485
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2141689..2144424 -
Powered by Drupal