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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:237058..238647+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001626-T1 ID=KJC3_001626-T1|Name=KJC3_001626-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1590bp|location=Sequence derived from alignment at ch2:237058..238647+ (Aspergillus niger KJC3)
ATGCTTCGCAATACTCTCCCCACGCTTTTGGGCCTGGCATCTTTTTCTTC
CGCTGCGCTTTACGAAACCAAGATTGAGACCAAATATGGCTCAGTCCAGG
GTTATCCGGCTTTCAACAGCAGCCATACCGGCAACCTGACGCACTGGAAA
GACATCACTGTGTGGAAGGGCATTCCGTTTGCTGCGACCACCGGAGGTGC
CAATCGTTGGAAAGCGCCGCAGCCCGCAAGTCCATGGAACGGAACGCTTG
ACGCGCGCAACTGGGGCCCTGTCTGCCCTTCCGCTACGACCGGAGATAAC
AGTTACACCATTGACGAGGACTGCCTCAATTTGAATATTTGGAGTCCGGC
AAACTCTACCGATGCCAAGCTCCCGGTGGTCATGTGGAGTTATCCTGCTG
AGTCTACTGCGGCAGACCCTCTCTTTGACGGCGGTGGTATGGCCGACAAG
GGAATTGTCTTCGTCAATTACAACTACCGAACTGGTCCCTTCGGTTGGCT
TGCTCACTCTGAGCTTTCGGAAGAATTTGAGAAGGTGACTGGGTCCAACA
GCTCAGGTAATTGGGGAATGCTAGATCAGTTCGCTGCATTGAAATGGATT
CATGCCAATATTGAGGCCTTCGGTGGTGATCCGGACCAGATCACAGTCCA
GGGTCAATCGGCAGGCTCTGCGGCCACCCAGCATATACTTTACAGCAACT
TGACCAAGGGGCTGATTGTTGGTGCTATCATTGAGAGTGGTGTCCGCGAC
CCCCATGACCCCCTTTGCACCAGCCTTGCCGAGGCTTATACTACGCTAGA
TGATGCGCTGGAGGATGGCAATACCTACCTATCGAATCTGGGAGTTTCTA
ATATCGCCGAAGCCCGCAACCTAAGCATGGAGGCATTGATTGACGGAGCG
ACTGGGTCCACTCGCAAAGATACAATCATGTTCGAGGCAGTCCTTGATTA
TTACGCCATGCCAGATACCTACCTCAATATCCTGAAGAAAGGTCTTGCTC
ATGACGTCCCGGTCATCACCGGTAACAACAAAGACGAAAATGGCGCTACC
TACGGTCTCGATATCTCACTCGCGGAGTATCTTGAGGATCTCAATGAAAC
CTACAGTGGGGAGTGGATTGAGCGGTTCTTTGATCTCTATCCGGCCAATG
ACTCGACGACCGCATCAGGTGCATACAACTCTATGTTCACCGACCGCTCC
AAGGTGGGCACTTGGCTCTGGACCCAGATGTGGTACACCAAGAAGAGCAG
CCTGGTTTGGAACTACTTCTGGGATCACGCCCCCCCTGGCCAGAGCTCTG
GGGCTTATCACGAGTCGGAGATCAATTACGTATTGAACAATCTCTATGCC
ACCGACAAACCCTGGACTGCTGAGGACTACGCTATCGCCAAGAATATGAA
TGACTACTGGGCCAGCTTTATCAAGACCAGAAATCCCAACACTCAAGCAG
GAGGTGCAGTTCATTGGCCTGCAGTGAACTCATCCAAGCTGGTGCAGCAT
GTCGGCGATGGATGGGGCCAGATTCCGATCGCCTGGAGCAAGAAGGTTAA
GCTTTTTGAGAATTGGTTTGCCACACTTGTGGCATACTGA back to topCoding sequence (CDS) from alignment at ch2:237058..238647+ >KJC3_001626-T1 ID=KJC3_001626-T1|Name=KJC3_001626-T1|organism=Aspergillus niger KJC3|type=CDS|length=1590bp|location=Sequence derived from alignment at ch2:237058..238647+ (Aspergillus niger KJC3)
ATGCTTCGCAATACTCTCCCCACGCTTTTGGGCCTGGCATCTTTTTCTTC
CGCTGCGCTTTACGAAACCAAGATTGAGACCAAATATGGCTCAGTCCAGG
GTTATCCGGCTTTCAACAGCAGCCATACCGGCAACCTGACGCACTGGAAA
GACATCACTGTGTGGAAGGGCATTCCGTTTGCTGCGACCACCGGAGGTGC
CAATCGTTGGAAAGCGCCGCAGCCCGCAAGTCCATGGAACGGAACGCTTG
ACGCGCGCAACTGGGGCCCTGTCTGCCCTTCCGCTACGACCGGAGATAAC
AGTTACACCATTGACGAGGACTGCCTCAATTTGAATATTTGGAGTCCGGC
AAACTCTACCGATGCCAAGCTCCCGGTGGTCATGTGGAGTTATCCTGCTG
AGTCTACTGCGGCAGACCCTCTCTTTGACGGCGGTGGTATGGCCGACAAG
GGAATTGTCTTCGTCAATTACAACTACCGAACTGGTCCCTTCGGTTGGCT
TGCTCACTCTGAGCTTTCGGAAGAATTTGAGAAGGTGACTGGGTCCAACA
GCTCAGGTAATTGGGGAATGCTAGATCAGTTCGCTGCATTGAAATGGATT
CATGCCAATATTGAGGCCTTCGGTGGTGATCCGGACCAGATCACAGTCCA
GGGTCAATCGGCAGGCTCTGCGGCCACCCAGCATATACTTTACAGCAACT
TGACCAAGGGGCTGATTGTTGGTGCTATCATTGAGAGTGGTGTCCGCGAC
CCCCATGACCCCCTTTGCACCAGCCTTGCCGAGGCTTATACTACGCTAGA
TGATGCGCTGGAGGATGGCAATACCTACCTATCGAATCTGGGAGTTTCTA
ATATCGCCGAAGCCCGCAACCTAAGCATGGAGGCATTGATTGACGGAGCG
ACTGGGTCCACTCGCAAAGATACAATCATGTTCGAGGCAGTCCTTGATTA
TTACGCCATGCCAGATACCTACCTCAATATCCTGAAGAAAGGTCTTGCTC
ATGACGTCCCGGTCATCACCGGTAACAACAAAGACGAAAATGGCGCTACC
TACGGTCTCGATATCTCACTCGCGGAGTATCTTGAGGATCTCAATGAAAC
CTACAGTGGGGAGTGGATTGAGCGGTTCTTTGATCTCTATCCGGCCAATG
ACTCGACGACCGCATCAGGTGCATACAACTCTATGTTCACCGACCGCTCC
AAGGTGGGCACTTGGCTCTGGACCCAGATGTGGTACACCAAGAAGAGCAG
CCTGGTTTGGAACTACTTCTGGGATCACGCCCCCCCTGGCCAGAGCTCTG
GGGCTTATCACGAGTCGGAGATCAATTACGTATTGAACAATCTCTATGCC
ACCGACAAACCCTGGACTGCTGAGGACTACGCTATCGCCAAGAATATGAA
TGACTACTGGGCCAGCTTTATCAAGACCAGAAATCCCAACACTCAAGCAG
GAGGTGCAGTTCATTGGCCTGCAGTGAACTCATCCAAGCTGGTGCAGCAT
GTCGGCGATGGATGGGGCCAGATTCCGATCGCCTGGAGCAAGAAGGTTAA
GCTTTTTGAGAATTGGTTTGCCACACTTGTGGCATACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | MEROPS:MER0030934 |
| DBxref | InterPro:IPR019826 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR002018 |
| DBxref | PFAM:PF00135 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:237058..238647 + |
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