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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:894316..896960- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001859-T1 ID=KJC3_001859-T1|Name=KJC3_001859-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2645bp|location=Sequence derived from alignment at ch2:894316..896960- (Aspergillus niger KJC3)
GCATCCTGGCTAGCAATAAATAATGTCTCAGAGGGAATTTTCTATTTCCC
AAATCCCGCTGTTCTACGGAAAAGTAATAAGAAACTCCTGCCGCCCGGTT
TCCCCCCTCCAGAGGTGCTAATAGTATTCACCTAAAGCCCTCCCCTACTT
ATCACTACTGTCTTGGGATTTGAGATAGATTCACTCGCACGGGCTGCAAC
CACCACTCACTCGTCATCTCTGGAGTTCCCCTCCTCCCTCCCCACCATAC
TCTCTCACCTTTACCTCACCCGCCTCGTTATTCTCTCTGCGGTTGCCGGA
CTGGCTTTAGTGACCACCTTGTTCCTTTTTGTTCTGTCTTGAATCGTTGC
AGTTAATTCATTCACCGTCTGTATATCACACCTCTGCAGCCATGGAGAAG
GATTTCATTGAACCCAAGTCGGAGCCCTCGTTCGGCGACGCTCCTCCTCT
CTACGGCGAATCTGAATCGACCAAAGGCAGCGTTGGCCAGCGGATCTGGG
ATAGTTTCAAGAGAGACCCCAATGCTCGTGCCTCGGCGCATCATGAACCT
GGTCATGATGGGAAGACCTTCGACATCGAAAATGCCGCTCAGAATACTGC
TAGCTCACCACTGGCACGCAAACTCAAAGGTCGCCATCTTCAGATGATCG
CGATTGGTGGTTCAATTGGTATGCATGGTCCCTTGATGCCGAGACTCACG
TCATCTGGGCTTCGTCCTTGCTGACTGCATGTGCGCTTTAGGTACTGGTC
TTTTTGTCGGATCTGGATCGGTCCTGGCGGCCGGTGGTCCAGCCTCGGTC
CTGATCGCATATGCCTTGATCGGCTGCATGCTTTACTGCACAGTGCACGC
GCTGGGTGAAATGGCCGTTCTCTTCCCTGTCGCTGGTTCGTTTTCGCATT
ATTCCACTCGGTTCATCGATCCCGCTTGGGGTTTCGCCATGGGTTGGAAT
TATCTGCTGCAGTGGCTCGTGACCCTCCCCACCGAAATTGTTGCCGCCTC
GTTGACTGTCGACTACTGGGATTCGGGCGTCTCGAATGCTGCCTGGGTCG
CTATTTTCTGGACGGTAATTGTGTGCATCAACATGTTCGGTGTTAAGGGT
TATGGTGAAGCAGAGTTTGTGTTTTCCATCGTCAAGGTCACCGCCGTAGT
TGGCTTCATGTGAGTCTATTGGATTTGCCCCCTCCAGCATTCGTATGCGA
TGAGGGTTTACTGACTTCATACAGCATTCTCGGTATCATCCTGACTTGTG
GCGGTGGGCCCCATGGTGGATACATCGGTGGAAGATACTGGCACGACCCA
GGTGCCTTCCACAACGGCTTCAAGGGTCTTTGCAGTGTTTTTGTGAACGC
TGCATTTGCGTTTGCTGGTACTGAGCTGGTTGGCCTTGCCGCTGCAGAGA
CCGCTAATCCCAGAAAATCGCTCCCGACCGCCGTCAAGCAGGTGTTCTGG
CGTATCACCCTCTTCTACATTGTGTCTCTGACCTTGGTCGGCCTCCTTGT
TCCCTACACCGATTCTCGACTCCTCGATGGATCGTCTAGCGCCGATGCCA
AAGCATCCCCATTCGTCATCTCCATTGTGCACGCGGGAATCTCTGGACTG
CCGTCTGTGATGAACGTTGTCATCATGATTGCTGTGCTCTCCGTGGGCAA
TGCAGCTGTCTACGGCTCTTCTAGAACCCTGGCGGCCCTGGCTGAGCAAC
AGCAGGCCCCGAAATTCTTCGCCTACATCGATCGCAAAGGCCGTCCTCTT
CCGGCTCTCATCGTTGCTTCGGCGTTTGGTTTGCTTGGATTCCTGGCCGC
TTCCGATAAAGAGGGTGAAGCCTTCACATGGATGATGGCCATCTCGGGTC
TCTCCTCCATCTTCACCTGGGGATCAATCTGCCTGTGCCACATTCGCTTC
CGTCGCGCTTGGAAATTGCAAGGGCATAGCCTCGATGAGCTGGCTTTCAA
GTCCCAGCCTGGTGTGATTGGTTCCTGGATTGGGCTCATTTTCAACTGCC
TCGTTCTGATTGCTCAGTTCTGGGTCGGCTTTGCGCCCAGCGGATATGCT
GACATGTCAGCCTCTGAATTGGTATCCAACTTCTTCTCCGCCTACCTTGC
TGCGCCAGTCGTGTTGGCCTTCTACATCCCCTACAAGCTTTGGTTCAAGA
CCCCCTTCGTCCGGGCCAAGGACATGGATCTTCAAACCGGTCGTCGCGAT
CTCGACATCCAAGCGCTCATCGAAGAGGAGAAGGCGGAACAGGCGGCCTG
GCCTGCGTGGAAGAAGGTGTGGAAATTCTTCTGCTAAAGCTGGGTTGGGT
CACATTTCAAAGGTGTTAGGGCTTGTTTCATGCTTGGGCTATGTTTTCTT
CCATCAATTTCCCCTTTTGCGCTTGAATTATGTATGATTATGATCATGCC
TCCCTCTTCAGTCTATGTCCACATAAAGTAGCATATTTGATCAGCGCTGA
GTCGATGCATCGGGATGGCGAAATGTTCACCAAAAAAACAACAAATTGAG
AAATTTTTACTCGACGAAGACTGTCATCATAACTCAGAACCGAATGAAAG
TATCTTGACAATGAATAAATTGAGAGCAACTATATGTATGGACTTCCGTG
TTTAGAGGAATGATTTTCAAACTCTAAGAATAGAAGCATACCGAC back to topCoding sequence (CDS) from alignment at ch2:894316..896960- >KJC3_001859-T1 ID=KJC3_001859-T1|Name=KJC3_001859-T1|organism=Aspergillus niger KJC3|type=CDS|length=5274bp|location=Sequence derived from alignment at ch2:894316..896960- (Aspergillus niger KJC3)
CATTCTCGGTATCATCCTGACTTGTGGCGGTGGGCCCCATGGTGGATACA
TCGGTGGAAGATACTGGCACGACCCAGGTGCCTTCCACAACGGCTTCAAG
GGTCTTTGCAGTGTTTTTGTGAACGCTGCATTTGCGTTTGCTGGTACTGA
GCTGGTTGGCCTTGCCGCTGCAGAGACCGCTAATCCCAGAAAATCGCTCC
CGACCGCCGTCAAGCAGGTGTTCTGGCGTATCACCCTCTTCTACATTGTG
TCTCTGACCTTGGTCGGCCTCCTTGTTCCCTACACCGATTCTCGACTCCT
CGATGGATCGTCTAGCGCCGATGCCAAAGCATCCCCATTCGTCATCTCCA
TTGTGCACGCGGGAATCTCTGGACTGCCGTCTGTGATGAACGTTGTCATC
ATGATTGCTGTGCTCTCCGTGGGCAATGCAGCTGTCTACGGCTCTTCTAG
AACCCTGGCGGCCCTGGCTGAGCAACAGCAGGCCCCGAAATTCTTCGCCT
ACATCGATCGCAAAGGCCGTCCTCTTCCGGCTCTCATCGTTGCTTCGGCG
TTTGGTTTGCTTGGATTCCTGGCCGCTTCCGATAAAGAGGGTGAAGCCTT
CACATGGATGATGGCCATCTCGGGTCTCTCCTCCATCTTCACCTGGGGAT
CAATCTGCCTGTGCCACATTCGCTTCCGTCGCGCTTGGAAATTGCAAGGG
CATAGCCTCGATGAGCTGGCTTTCAAGTCCCAGCCTGGTGTGATTGGTTC
CTGGATTGGGCTCATTTTCAACTGCCTCGTTCTGATTGCTCAGTTCTGGG
TCGGCTTTGCGCCCAGCGGATATGCTGACATGTCAGCCTCTGAATTGGTA
TCCAACTTCTTCTCCGCCTACCTTGCTGCGCCAGTCGTGTTGGCCTTCTA
CATCCCCTACAAGCTTTGGTTCAAGACCCCCTTCGTCCGGGCCAAGGACA
TGGATCTTCAAACCGGTCGTCGCGATCTCGACATCCAAGCGCTCATCGAA
GAGGAGAAGGCGGAACAGGCGGCCTGGCCTGCGTGGAAGAAGGTGTGGAA
ATTCTTCTGCTAAGTACTGGTCTTTTTGTCGGATCTGGATCGGTCCTGGC
GGCCGGTGGTCCAGCCTCGGTCCTGATCGCATATGCCTTGATCGGCTGCA
TGCTTTACTGCACAGTGCACGCGCTGGGTGAAATGGCCGTTCTCTTCCCT
GTCGCTGGTTCGTTTTCGCATTATTCCACTCGGTTCATCGATCCCGCTTG
GGGTTTCGCCATGGGTTGGAATTATCTGCTGCAGTGGCTCGTGACCCTCC
CCACCGAAATTGTTGCCGCCTCGTTGACTGTCGACTACTGGGATTCGGGC
GTCTCGAATGCTGCCTGGGTCGCTATTTTCTGGACGGTAATTGTGTGCAT
CAACATGTTCGGTGTTAAGGGTTATGGTGAAGCAGAGTTTGTGTTTTCCA
TCGTCAAGGTCACCGCCGTAGTTGGCTTCATATGGAGAAGGATTTCATTG
AACCCAAGTCGGAGCCCTCGTTCGGCGACGCTCCTCCTCTCTACGGCGAA
TCTGAATCGACCAAAGGCAGCGTTGGCCAGCGGATCTGGGATAGTTTCAA
GAGAGACCCCAATGCTCGTGCCTCGGCGCATCATGAACCTGGTCATGATG
GGAAGACCTTCGACATCGAAAATGCCGCTCAGAATACTGCTAGCTCACCA
CTGGCACGCAAACTCAAAGGTCGCCATCTTCAGATGATCGCGATTGGTGG
TTCAATTGCATTCTCGGTATCATCCTGACTTGTGGCGGTGGGCCCCATGG
TGGATACATCGGTGGAAGATACTGGCACGACCCAGGTGCCTTCCACAACG
GCTTCAAGGGTCTTTGCAGTGTTTTTGTGAACGCTGCATTTGCGTTTGCT
GGTACTGAGCTGGTTGGCCTTGCCGCTGCAGAGACCGCTAATCCCAGAAA
ATCGCTCCCGACCGCCGTCAAGCAGGTGTTCTGGCGTATCACCCTCTTCT
ACATTGTGTCTCTGACCTTGGTCGGCCTCCTTGTTCCCTACACCGATTCT
CGACTCCTCGATGGATCGTCTAGCGCCGATGCCAAAGCATCCCCATTCGT
CATCTCCATTGTGCACGCGGGAATCTCTGGACTGCCGTCTGTGATGAACG
TTGTCATCATGATTGCTGTGCTCTCCGTGGGCAATGCAGCTGTCTACGGC
TCTTCTAGAACCCTGGCGGCCCTGGCTGAGCAACAGCAGGCCCCGAAATT
CTTCGCCTACATCGATCGCAAAGGCCGTCCTCTTCCGGCTCTCATCGTTG
CTTCGGCGTTTGGTTTGCTTGGATTCCTGGCCGCTTCCGATAAAGAGGGT
GAAGCCTTCACATGGATGATGGCCATCTCGGGTCTCTCCTCCATCTTCAC
CTGGGGATCAATCTGCCTGTGCCACATTCGCTTCCGTCGCGCTTGGAAAT
TGCAAGGGCATAGCCTCGATGAGCTGGCTTTCAAGTCCCAGCCTGGTGTG
ATTGGTTCCTGGATTGGGCTCATTTTCAACTGCCTCGTTCTGATTGCTCA
GTTCTGGGTCGGCTTTGCGCCCAGCGGATATGCTGACATGTCAGCCTCTG
AATTGGTATCCAACTTCTTCTCCGCCTACCTTGCTGCGCCAGTCGTGTTG
GCCTTCTACATCCCCTACAAGCTTTGGTTCAAGACCCCCTTCGTCCGGGC
CAAGGACATGGATCTTCAAACCGGTCGTCGCGATCTCGACATCCAAGCGC
TCATCGAAGAGGAGAAGGCGGAACAGGCGGCCTGGCCTGCGTGGAAGAAG
GTGTGGAAATTCTTCTGCTAAGTACTGGTCTTTTTGTCGGATCTGGATCG
GTCCTGGCGGCCGGTGGTCCAGCCTCGGTCCTGATCGCATATGCCTTGAT
CGGCTGCATGCTTTACTGCACAGTGCACGCGCTGGGTGAAATGGCCGTTC
TCTTCCCTGTCGCTGGTTCGTTTTCGCATTATTCCACTCGGTTCATCGAT
CCCGCTTGGGGTTTCGCCATGGGTTGGAATTATCTGCTGCAGTGGCTCGT
GACCCTCCCCACCGAAATTGTTGCCGCCTCGTTGACTGTCGACTACTGGG
ATTCGGGCGTCTCGAATGCTGCCTGGGTCGCTATTTTCTGGACGGTAATT
GTGTGCATCAACATGTTCGGTGTTAAGGGTTATGGTGAAGCAGAGTTTGT
GTTTTCCATCGTCAAGGTCACCGCCGTAGTTGGCTTCATATGGAGAAGGA
TTTCATTGAACCCAAGTCGGAGCCCTCGTTCGGCGACGCTCCTCCTCTCT
ACGGCGAATCTGAATCGACCAAAGGCAGCGTTGGCCAGCGGATCTGGGAT
AGTTTCAAGAGAGACCCCAATGCTCGTGCCTCGGCGCATCATGAACCTGG
TCATGATGGGAAGACCTTCGACATCGAAAATGCCGCTCAGAATACTGCTA
GCTCACCACTGGCACGCAAACTCAAAGGTCGCCATCTTCAGATGATCGCG
ATTGGTGGTTCAATTGCATTCTCGGTATCATCCTGACTTGTGGCGGTGGG
CCCCATGGTGGATACATCGGTGGAAGATACTGGCACGACCCAGGTGCCTT
CCACAACGGCTTCAAGGGTCTTTGCAGTGTTTTTGTGAACGCTGCATTTG
CGTTTGCTGGTACTGAGCTGGTTGGCCTTGCCGCTGCAGAGACCGCTAAT
CCCAGAAAATCGCTCCCGACCGCCGTCAAGCAGGTGTTCTGGCGTATCAC
CCTCTTCTACATTGTGTCTCTGACCTTGGTCGGCCTCCTTGTTCCCTACA
CCGATTCTCGACTCCTCGATGGATCGTCTAGCGCCGATGCCAAAGCATCC
CCATTCGTCATCTCCATTGTGCACGCGGGAATCTCTGGACTGCCGTCTGT
GATGAACGTTGTCATCATGATTGCTGTGCTCTCCGTGGGCAATGCAGCTG
TCTACGGCTCTTCTAGAACCCTGGCGGCCCTGGCTGAGCAACAGCAGGCC
CCGAAATTCTTCGCCTACATCGATCGCAAAGGCCGTCCTCTTCCGGCTCT
CATCGTTGCTTCGGCGTTTGGTTTGCTTGGATTCCTGGCCGCTTCCGATA
AAGAGGGTGAAGCCTTCACATGGATGATGGCCATCTCGGGTCTCTCCTCC
ATCTTCACCTGGGGATCAATCTGCCTGTGCCACATTCGCTTCCGTCGCGC
TTGGAAATTGCAAGGGCATAGCCTCGATGAGCTGGCTTTCAAGTCCCAGC
CTGGTGTGATTGGTTCCTGGATTGGGCTCATTTTCAACTGCCTCGTTCTG
ATTGCTCAGTTCTGGGTCGGCTTTGCGCCCAGCGGATATGCTGACATGTC
AGCCTCTGAATTGGTATCCAACTTCTTCTCCGCCTACCTTGCTGCGCCAG
TCGTGTTGGCCTTCTACATCCCCTACAAGCTTTGGTTCAAGACCCCCTTC
GTCCGGGCCAAGGACATGGATCTTCAAACCGGTCGTCGCGATCTCGACAT
CCAAGCGCTCATCGAAGAGGAGAAGGCGGAACAGGCGGCCTGGCCTGCGT
GGAAGAAGGTGTGGAAATTCTTCTGCTAAGTACTGGTCTTTTTGTCGGAT
CTGGATCGGTCCTGGCGGCCGGTGGTCCAGCCTCGGTCCTGATCGCATAT
GCCTTGATCGGCTGCATGCTTTACTGCACAGTGCACGCGCTGGGTGAAAT
GGCCGTTCTCTTCCCTGTCGCTGGTTCGTTTTCGCATTATTCCACTCGGT
TCATCGATCCCGCTTGGGGTTTCGCCATGGGTTGGAATTATCTGCTGCAG
TGGCTCGTGACCCTCCCCACCGAAATTGTTGCCGCCTCGTTGACTGTCGA
CTACTGGGATTCGGGCGTCTCGAATGCTGCCTGGGTCGCTATTTTCTGGA
CGGTAATTGTGTGCATCAACATGTTCGGTGTTAAGGGTTATGGTGAAGCA
GAGTTTGTGTTTTCCATCGTCAAGGTCACCGCCGTAGTTGGCTTCATATG
GAGAAGGATTTCATTGAACCCAAGTCGGAGCCCTCGTTCGGCGACGCTCC
TCCTCTCTACGGCGAATCTGAATCGACCAAAGGCAGCGTTGGCCAGCGGA
TCTGGGATAGTTTCAAGAGAGACCCCAATGCTCGTGCCTCGGCGCATCAT
GAACCTGGTCATGATGGGAAGACCTTCGACATCGAAAATGCCGCTCAGAA
TACTGCTAGCTCACCACTGGCACGCAAACTCAAAGGTCGCCATCTTCAGA
TGATCGCGATTGGTGGTTCAATTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
| GO:0006865 | amino acid transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001859-T1.utr3p1 | KJC3_001859-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001859-T1.utr5p1 | KJC3_001859-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004840 |
| DBxref | InterPro:IPR004841 |
| DBxref | InterPro:IPR004762 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | amino acid permease |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:894316..896960 - |
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