You are here

Home

KJC3_001881-T1, KJC3_001881-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001881-T1
Unique NameKJC3_001881-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:949019..950525-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001881-T1 ID=KJC3_001881-T1|Name=KJC3_001881-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1507bp|location=Sequence derived from alignment at ch2:949019..950525- (Aspergillus niger KJC3)
GCCAGCAAAACCCGCAACCCACCCCAATTGCACAGCACCATGCGACCGTC
CATGCGATTGCTGAGCCTTGATGTTCAGGGCGCCTCGCGGACCCTGTACG
TCTGCTCAGTATGCAGAAACGAGGCGCGGCCGCGGCCAATTGTCGCCCGG
CAATTCCTTCGCCATGCTTCCAACACACCGGACTCGCTGAGTGAGCGAGT
GAGACGCAAGCTTTGGGGTACGGATAACCCGCCTGGTCTGAAGGATCCGT
ATGGAGAGAGTTTGCTTGAGAAGAGGTTCGGGAAGGCCAAGGCTCAGCCG
GAGGGCGAGACGGAGGTGGTGACTGCGGAGGAGGCAGCACCTGAGGCTGA
AGCTGATGCTGTCGATCAGCTGGAGCCGGGGGTGGATTATGAGCCTGCGA
CGACATGGGAGGGGTTGGAGCGTGTGGGTCATTTGGGAGGATGGAAGAAT
GCTCCTCGGGCTGAGGTTGATCGGGTTGCGGCGTAAGTTGTTCTCCTGAT
GGTCATGGCAATGGAGGTTTGGAGTTGTTTTGGCTAATTAGTTTGTCTCG
ATGGATAGATTCGGTCTTAAGAAGAAACTCCGCAAACAGGGTCCCCTGTC
TCTTGCTGCGCATCAGGCCGCTGTTGAGATCTGTCTGATGCATGCGCTGA
ACAAGCCATTGACGAGCGTCTGCAATGTCGCCGAACATGACAAGGCCGTT
TTCAAGATGATCTGGAAGACTAAGATCGTGCCTGGTGAGGCTGGCAGCTG
GGGCAGCGCGCTCCAGTACCACAGTAAGCAGGCTAAGGAGGCCCTCGTTT
ACATCTTCGAGCAGATCGGTGGTAGTCAGCCGGAGGCTGTGGAGCAACAG
CAGGCTGCTGAGGAGACTGCCGAGGTTGAGGAGTTCGAGGAGGCCGCTTG
GGAGGGTGAGGAAGAGGAGGTTCCTAAGGTTCCTTTCTTCGGATACCAGG
ATGCTCGTGATAAGGGATTCTTGACTTTGTCTTTGGAGGACCCCGAGACG
AAGTTTGCTGTTAGTTTCCCCCCGTAACCATTCCAGCTGGATTGATTTGC
TGTGCAGATAGTCGCTGACCTTTCTTTGTCCAACAGTTCCTCAAGAGATT
CTCCCAGCTGAGCGGCCACTTCTTCCCCGACAACATCGTCCACCAGATCT
CCACCGTCAAACAGGCCGTCGACTACGTCCAGGGCCAATTGAACCCCAAG
CCCAAGAAGCTGGCTGAAATCCTCGAGAACAACGACCGGCTCCAGTCCCT
GCCCAACATCAAGGTCTTCTCGAAGAGACAGACCCGCTTGCACCGCGATG
ACGAAATGGGCCGGAGGAAGATCATTGAGGCCGAGCTTCGTTCCAGAGGA
CTTCTTGCATAGACCGATTGCATGGCATACATATCTTGCAGGTTTGTTTG
GTTGGCTGGCTGGCTCAAAGATTATCTATCTCTAGTTCTTGTAGCATGTT
ATATCTAGTACGAAATTATTGCTGTACAATAGGAATTGACGTCTTTTTTT
GTTCATT
back to top

Coding sequence (CDS) from alignment at ch2:949019..950525-

>KJC3_001881-T1 ID=KJC3_001881-T1|Name=KJC3_001881-T1|organism=Aspergillus niger KJC3|type=CDS|length=3510bp|location=Sequence derived from alignment at ch2:949019..950525- (Aspergillus niger KJC3)
TTCCTCAAGAGATTCTCCCAGCTGAGCGGCCACTTCTTCCCCGACAACAT
CGTCCACCAGATCTCCACCGTCAAACAGGCCGTCGACTACGTCCAGGGCC
AATTGAACCCCAAGCCCAAGAAGCTGGCTGAAATCCTCGAGAACAACGAC
CGGCTCCAGTCCCTGCCCAACATCAAGGTCTTCTCGAAGAGACAGACCCG
CTTGCACCGCGATGACGAAATGGGCCGGAGGAAGATCATTGAGGCCGAGC
TTCGTTCCAGAGGACTTCTTGCATAGATTCGGTCTTAAGAAGAAACTCCG
CAAACAGGGTCCCCTGTCTCTTGCTGCGCATCAGGCCGCTGTTGAGATCT
GTCTGATGCATGCGCTGAACAAGCCATTGACGAGCGTCTGCAATGTCGCC
GAACATGACAAGGCCGTTTTCAAGATGATCTGGAAGACTAAGATCGTGCC
TGGTGAGGCTGGCAGCTGGGGCAGCGCGCTCCAGTACCACAGTAAGCAGG
CTAAGGAGGCCCTCGTTTACATCTTCGAGCAGATCGGTGGTAGTCAGCCG
GAGGCTGTGGAGCAACAGCAGGCTGCTGAGGAGACTGCCGAGGTTGAGGA
GTTCGAGGAGGCCGCTTGGGAGGGTGAGGAAGAGGAGGTTCCTAAGGTTC
CTTTCTTCGGATACCAGGATGCTCGTGATAAGGGATTCTTGACTTTGTCT
TTGGAGGACCCCGAGACGAAGTTTGCTATGCGACCGTCCATGCGATTGCT
GAGCCTTGATGTTCAGGGCGCCTCGCGGACCCTGTACGTCTGCTCAGTAT
GCAGAAACGAGGCGCGGCCGCGGCCAATTGTCGCCCGGCAATTCCTTCGC
CATGCTTCCAACACACCGGACTCGCTGAGTGAGCGAGTGAGACGCAAGCT
TTGGGGTACGGATAACCCGCCTGGTCTGAAGGATCCGTATGGAGAGAGTT
TGCTTGAGAAGAGGTTCGGGAAGGCCAAGGCTCAGCCGGAGGGCGAGACG
GAGGTGGTGACTGCGGAGGAGGCAGCACCTGAGGCTGAAGCTGATGCTGT
CGATCAGCTGGAGCCGGGGGTGGATTATGAGCCTGCGACGACATGGGAGG
GGTTGGAGCGTGTGGGTCATTTGGGAGGATGGAAGAATGCTCCTCGGGCT
GAGGTTGATCGGGTTGCGGCTTCCTCAAGAGATTCTCCCAGCTGAGCGGC
CACTTCTTCCCCGACAACATCGTCCACCAGATCTCCACCGTCAAACAGGC
CGTCGACTACGTCCAGGGCCAATTGAACCCCAAGCCCAAGAAGCTGGCTG
AAATCCTCGAGAACAACGACCGGCTCCAGTCCCTGCCCAACATCAAGGTC
TTCTCGAAGAGACAGACCCGCTTGCACCGCGATGACGAAATGGGCCGGAG
GAAGATCATTGAGGCCGAGCTTCGTTCCAGAGGACTTCTTGCATAGATTC
GGTCTTAAGAAGAAACTCCGCAAACAGGGTCCCCTGTCTCTTGCTGCGCA
TCAGGCCGCTGTTGAGATCTGTCTGATGCATGCGCTGAACAAGCCATTGA
CGAGCGTCTGCAATGTCGCCGAACATGACAAGGCCGTTTTCAAGATGATC
TGGAAGACTAAGATCGTGCCTGGTGAGGCTGGCAGCTGGGGCAGCGCGCT
CCAGTACCACAGTAAGCAGGCTAAGGAGGCCCTCGTTTACATCTTCGAGC
AGATCGGTGGTAGTCAGCCGGAGGCTGTGGAGCAACAGCAGGCTGCTGAG
GAGACTGCCGAGGTTGAGGAGTTCGAGGAGGCCGCTTGGGAGGGTGAGGA
AGAGGAGGTTCCTAAGGTTCCTTTCTTCGGATACCAGGATGCTCGTGATA
AGGGATTCTTGACTTTGTCTTTGGAGGACCCCGAGACGAAGTTTGCTATG
CGACCGTCCATGCGATTGCTGAGCCTTGATGTTCAGGGCGCCTCGCGGAC
CCTGTACGTCTGCTCAGTATGCAGAAACGAGGCGCGGCCGCGGCCAATTG
TCGCCCGGCAATTCCTTCGCCATGCTTCCAACACACCGGACTCGCTGAGT
GAGCGAGTGAGACGCAAGCTTTGGGGTACGGATAACCCGCCTGGTCTGAA
GGATCCGTATGGAGAGAGTTTGCTTGAGAAGAGGTTCGGGAAGGCCAAGG
CTCAGCCGGAGGGCGAGACGGAGGTGGTGACTGCGGAGGAGGCAGCACCT
GAGGCTGAAGCTGATGCTGTCGATCAGCTGGAGCCGGGGGTGGATTATGA
GCCTGCGACGACATGGGAGGGGTTGGAGCGTGTGGGTCATTTGGGAGGAT
GGAAGAATGCTCCTCGGGCTGAGGTTGATCGGGTTGCGGCTTCCTCAAGA
GATTCTCCCAGCTGAGCGGCCACTTCTTCCCCGACAACATCGTCCACCAG
ATCTCCACCGTCAAACAGGCCGTCGACTACGTCCAGGGCCAATTGAACCC
CAAGCCCAAGAAGCTGGCTGAAATCCTCGAGAACAACGACCGGCTCCAGT
CCCTGCCCAACATCAAGGTCTTCTCGAAGAGACAGACCCGCTTGCACCGC
GATGACGAAATGGGCCGGAGGAAGATCATTGAGGCCGAGCTTCGTTCCAG
AGGACTTCTTGCATAGATTCGGTCTTAAGAAGAAACTCCGCAAACAGGGT
CCCCTGTCTCTTGCTGCGCATCAGGCCGCTGTTGAGATCTGTCTGATGCA
TGCGCTGAACAAGCCATTGACGAGCGTCTGCAATGTCGCCGAACATGACA
AGGCCGTTTTCAAGATGATCTGGAAGACTAAGATCGTGCCTGGTGAGGCT
GGCAGCTGGGGCAGCGCGCTCCAGTACCACAGTAAGCAGGCTAAGGAGGC
CCTCGTTTACATCTTCGAGCAGATCGGTGGTAGTCAGCCGGAGGCTGTGG
AGCAACAGCAGGCTGCTGAGGAGACTGCCGAGGTTGAGGAGTTCGAGGAG
GCCGCTTGGGAGGGTGAGGAAGAGGAGGTTCCTAAGGTTCCTTTCTTCGG
ATACCAGGATGCTCGTGATAAGGGATTCTTGACTTTGTCTTTGGAGGACC
CCGAGACGAAGTTTGCTATGCGACCGTCCATGCGATTGCTGAGCCTTGAT
GTTCAGGGCGCCTCGCGGACCCTGTACGTCTGCTCAGTATGCAGAAACGA
GGCGCGGCCGCGGCCAATTGTCGCCCGGCAATTCCTTCGCCATGCTTCCA
ACACACCGGACTCGCTGAGTGAGCGAGTGAGACGCAAGCTTTGGGGTACG
GATAACCCGCCTGGTCTGAAGGATCCGTATGGAGAGAGTTTGCTTGAGAA
GAGGTTCGGGAAGGCCAAGGCTCAGCCGGAGGGCGAGACGGAGGTGGTGA
CTGCGGAGGAGGCAGCACCTGAGGCTGAAGCTGATGCTGTCGATCAGCTG
GAGCCGGGGGTGGATTATGAGCCTGCGACGACATGGGAGGGGTTGGAGCG
TGTGGGTCATTTGGGAGGATGGAAGAATGCTCCTCGGGCTGAGGTTGATC
GGGTTGCGGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001881KJC3_001881Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001881-T1KJC3_001881-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001881-T1.cdsKJC3_001881-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001881-T1.utr3p1KJC3_001881-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001881-T1.exon3KJC3_001881-T1.exon3Aspergillus niger KJC3exon
KJC3_001881-T1.exon2KJC3_001881-T1.exon2Aspergillus niger KJC3exon
KJC3_001881-T1.exon1KJC3_001881-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001881-T1.utr5p1KJC3_001881-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018305
DBxrefPFAM:PF10501
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:949019..950525 -
Powered by Drupal