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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1726504..1729498+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002120-T1 ID=KJC3_002120-T1|Name=KJC3_002120-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2995bp|location=Sequence derived from alignment at ch2:1726504..1729498+ (Aspergillus niger KJC3)
AACATCCTAGAACCAATCCACTCTTCTTCTATTTCCAGAGGGTGCTCAAA
TATCTTTTTCCTACTCACCCTATAAGAATTACCTTCCATTGCCGACAGGC
GTGTCACCATGCCTGACCACAAAAAGAAAGGCAAGAAGAGCGGCGCCGCC
AAAAATGACTCCGGCTCGGTGATCAGTACGTACCTCACGATCAACCCATT
CTACCTTCTCAAAATGAAATGTTACACATGATTAACCTATAATCTTTCTG
TACAATCAGCCGATCCCAGATTCGCCAACATCCAAACCGACCCTCGCTAC
CGTCTTCCCAGCAAACGCCAAACTCATGTAAAGCTCGACAAGCGATTCGC
GCACATGCTGCGCGACAAGGATTTCTCCCGCAATGCCGCAGTCGATAGAT
ACGGCCGGAAGCTCGCCAGCGACGACACTAAGAAACAGCTTGAGCGATTC
TACCAGCTGGATGAGGATGCGCAGGAGGGAGAAGAAGAAGAGGAAGAAGG
CGAGGGAGAGGAAGATGATGGTCTCGAGGACGCTAGCGTTGCAGATGATG
AGGAGGTGCTTAGAGAGCTGAGGAAGGCGGAGACATACGATCCAGCCAGA
GATGGAGGATTCGATGAGTCTTCTTCCTCGGAGGAGGAGAGCTCCGACGA
GGAAGACGAGGATGAAGAGGAGTTCGAAGGGTTTGGCGAGGAGCTGGAAT
ATCCTGATAAGCACCGCGCGGATGTGCCGACTGGTGATGTTACGGACCGC
ATTGCGGTGGTGAATCTCGATTGGGATAATATTCGCGCGGAGGACCTGAT
GGCTGTCTTTTCCAGCTTTGCGCCGACTGGTGGGAAAGTGCTGAAGGTGG
CTGTTTATCCTAGTGAGTTTGGCAAAGAGAGGATGGAGAGGGAGGAGACG
GAGGGGCCGCCCAGGGAGATTTTTGCGTCGAAGAAGGGTGGTGACTCCGA
CGATGAGGATGAGATGGATTCTGATGAGGAGGAAGAGAATATCAGGAAGT
CTATGCTGAAGGAGGATAAGGGCGAGGAGTTCAACTCGACACAGCTACGG
AAGTATCAGTTGGAACGGCTACGTTACTTCTACGCTATCTTGACTTTCTC
GTCCAGGGACGTTGCGAAGCACGTTTATGACCTTGTCGATGGCGCCGAGT
ACTTGTCTAGCGCTAACTTCTTCGATCTTCGCTTTGTGCCTGAGGACACC
GATTTCTCTGATGATACGCCCCGCGACGAGTGCGAACGCATCCCCGATGG
ATACCAGCCGAACGAGTTCGTCACCGATGCGCTGCAGCACAGCAAGGTCA
AGCTGACCTGGGATATGGAGGATAAGTCGCGTAAGGAAGCCCAGGCTCGG
GCCTTCCGGGGTAGTCGCAAGGATATCGACGAGAACGACTTGAAGGCTTA
TCTGGCCAGTGATAGCTCAGACGATGAGGAAGATGAGGGTGGTGTGGAGA
TTGTTGATACTACGCGCGGCGATGGAGAAACGAAAAAGGTGTCTAAGAAG
GAGGAGGAGAAACAACGCCTTCGAGCCCTACTTGGTCTTGGTGCGGAGCC
TACGCCTTCGTCCAAGTCCGATGGCCCCGTTGGCGAGATGGAGGTTACCT
TCACTTCCGGTCTGGCTGGTGGCCCCAAGGGCGACAGCATCTTCGAGAAC
GAACCCGAGAAGGATGAGACTACGATCGAGAAGTACATCCGCAAAGAGCG
TGAGAGAAAGAAGCGCAGAAAGGAGAAGCTCAAGGCCACCAAGCGTGGTG
AGGATGGCGAGCAGGACGAGGCCGCTGATGCCTCGGATGCTAAGGAGCAG
CCCCAGCAGGACGACTTGGGCTTTGATGATCCCTTCTTCGATGACCCCAC
TGGCAAGGCTACTGAGGCTGCTCGTCGTAAGGAAGAGAAGCGCAAGAAGC
GGGAGGAGCGTGCAGCGGAGGAAGCCGCGGCCGCAGCCAAGCGGGCGGAG
CTGGAGCTGCTCATGATGGAGGACAACAACAAGCCGGGCATCAAGCACTT
CGATATGAACGAGATTGAAAAGGCGGAGAAACAAGCTCGCAAGAAGGGCA
AGAAGGGCAAGGGTAAGGGCAAGCAAGTCGAAGTTCCCACAGATGATTTC
GAGATGGAAGTCACCGATCCTCGTTTCGCTCGACTCTACGAGAGCCACGA
GTTCGCGATCGATCCCACCAACCCCCGATTCAAGGCGACTTCGGGTATGA
AGGCACTGTTGGAGGAGGGTCGCAAGCGACGCAGGGATCGGGATGAACAT
GCAGACGAGGAGGATGCTCTTCGTGAACAAAAGAAGAAGCAGAAGAAGAG
TGCGTCCAAGGAGGGCGGGTCAGACGATCTGAAGAAGCTGGTTGAAAAGG
TGAAGCAAAAGACCAAACGCAACTGATTGGGTTGTACTATATTTAGATGA
CTACTACTACTTACTGTTCCTACTACTCATCTATCATGAAAGCGTCATCA
CTGGGATGAGGATGCAGATACCATTGGCTAAAGGTTCTTGTGTGTTAATT
GAGAGATTTTGAGCGTCTGCCTGTGATCTGGACGGCAATGTCATTGTGTG
TTCCTTGTGTACCCCTGCACTGTAGCTGCTGTAATATTATTTCGACCTGT
CGCTGTGGCTCTCATTAGTCCAGGCCACTCTTCCCCCAGATTCCACCATG
TCCGACCCATGACGGGCGTAGGCGAGTAATGAAACGCAGTGTATAGATCC
GGCATTCACGGAGGAAAACCTGGTGAATCAGAGTGTGTTGAGCGGGCTTG
CAATCCCGACTGGCGCAGATTCCCGCCCAAACGCTGCCTGGCCCATGCAG
CATGAGGTGATTGTGTGACGGATTCGGCCGTGTGCAGGGGGGCAGTCGAG
CGCTGACAGGCCCAAAAGGCCGTGAAGTTGCAGGCGATCGGCCGCGATGA
GATGAGGCTGAGATCATGTGCGGTGCGGCCAGCTTCACCGCCCTTTCGGG
ATCTCGTCGCTCCTCTTCCCTTTCGCTTTCCTTCTCCAATATTCC back to topCoding sequence (CDS) from alignment at ch2:1726504..1729498+ >KJC3_002120-T1 ID=KJC3_002120-T1|Name=KJC3_002120-T1|organism=Aspergillus niger KJC3|type=CDS|length=4368bp|location=Sequence derived from alignment at ch2:1726504..1729498+ (Aspergillus niger KJC3)
ATGCCTGACCACAAAAAGAAAGGCAAGAAGAGCGGCGCCGCCAAAAATGA
CTCCGGCTCGGTGATCACCGATCCCAGATTCGCCAACATCCAAACCGACC
CTCGCTACCGTCTTCCCAGCAAACGCCAAACTCATGTAAAGCTCGACAAG
CGATTCGCGCACATGCTGCGCGACAAGGATTTCTCCCGCAATGCCGCAGT
CGATAGATACGGCCGGAAGCTCGCCAGCGACGACACTAAGAAACAGCTTG
AGCGATTCTACCAGCTGGATGAGGATGCGCAGGAGGGAGAAGAAGAAGAG
GAAGAAGGCGAGGGAGAGGAAGATGATGGTCTCGAGGACGCTAGCGTTGC
AGATGATGAGGAGGTGCTTAGAGAGCTGAGGAAGGCGGAGACATACGATC
CAGCCAGAGATGGAGGATTCGATGAGTCTTCTTCCTCGGAGGAGGAGAGC
TCCGACGAGGAAGACGAGGATGAAGAGGAGTTCGAAGGGTTTGGCGAGGA
GCTGGAATATCCTGATAAGCACCGCGCGGATGTGCCGACTGGTGATGTTA
CGGACCGCATTGCGGTGGTGAATCTCGATTGGGATAATATTCGCGCGGAG
GACCTGATGGCTGTCTTTTCCAGCTTTGCGCCGACTGGTGGGAAAGTGCT
GAAGGTGGCTGTTTATCCTAGTGAGTTTGGCAAAGAGAGGATGGAGAGGG
AGGAGACGGAGGGGCCGCCCAGGGAGATTTTTGCGTCGAAGAAGGGTGGT
GACTCCGACGATGAGGATGAGATGGATTCTGATGAGGAGGAAGAGAATAT
CAGGAAGTCTATGCTGAAGGAGGATAAGGGCGAGGAGTTCAACTCGACAC
AGCTACGGAAGTATCAGTTGGAACGGCTACGTTACTTCTACGCTATCTTG
ACTTTCTCGTCCAGGGACGTTGCGAAGCACGTTTATGACCTTGTCGATGG
CGCCGAGTACTTGTCTAGCGCTAACTTCTTCGATCTTCGCTTTGTGCCTG
AGGACACCGATTTCTCTGATGATACGCCCCGCGACGAGTGCGAACGCATC
CCCGATGGATACCAGCCGAACGAGTTCGTCACCGATGCGCTGCAGCACAG
CAAGGTCAAGCTGACCTGGGATATGGAGGATAAGTCGCGTAAGGAAGCCC
AGGCTCGGGCCTTCCGGGGTAGTCGCAAGGATATCGACGAGAACGACTTG
AAGGCTTATCTGGCCAGTGATAGCTCAGACGATGAGGAAGATGAGGGTGG
TGTGGAGATTGTTGATACTACGCGCGGCGATGGAGAAACGAAAAAGGTGT
CTAAGAAGGAGGAGGAGAAACAACGCCTTCGAGCCCTACTTGGTCTTGGT
GCGGAGCCTACGCCTTCGTCCAAGTCCGATGGCCCCGTTGGCGAGATGGA
GGTTACCTTCACTTCCGGTCTGGCTGGTGGCCCCAAGGGCGACAGCATCT
TCGAGAACGAACCCGAGAAGGATGAGACTACGATCGAGAAGTACATCCGC
AAAGAGCGTGAGAGAAAGAAGCGCAGAAAGGAGAAGCTCAAGGCCACCAA
GCGTGGTGAGGATGGCGAGCAGGACGAGGCCGCTGATGCCTCGGATGCTA
AGGAGCAGCCCCAGCAGGACGACTTGGGCTTTGATGATCCCTTCTTCGAT
GACCCCACTGGCAAGGCTACTGAGGCTGCTCGTCGTAAGGAAGAGAAGCG
CAAGAAGCGGGAGGAGCGTGCAGCGGAGGAAGCCGCGGCCGCAGCCAAGC
GGGCGGAGCTGGAGCTGCTCATGATGGAGGACAACAACAAGCCGGGCATC
AAGCACTTCGATATGAACGAGATTGAAAAGGCGGAGAAACAAGCTCGCAA
GAAGGGCAAGAAGGGCAAGGGTAAGGGCAAGCAAGTCGAAGTTCCCACAG
ATGATTTCGAGATGGAAGTCACCGATCCTCGTTTCGCTCGACTCTACGAG
AGCCACGAGTTCGCGATCGATCCCACCAACCCCCGATTCAAGGCGACTTC
GGGTATGAAGGCACTGTTGGAGGAGGGTCGCAAGCGACGCAGGGATCGGG
ATGAACATGCAGACGAGGAGGATGCTCTTCGTGAACAAAAGAAGAAGCAG
AAGAAGAGTGCGTCCAAGGAGGGCGGGTCAGACGATCTGAAGAAGCTGGT
TGAAAAGGTGAAGCAAAAGACCAAACGCAACTGAATGCCTGACCACAAAA
AGAAAGGCAAGAAGAGCGGCGCCGCCAAAAATGACTCCGGCTCGGTGATC
ACCGATCCCAGATTCGCCAACATCCAAACCGACCCTCGCTACCGTCTTCC
CAGCAAACGCCAAACTCATGTAAAGCTCGACAAGCGATTCGCGCACATGC
TGCGCGACAAGGATTTCTCCCGCAATGCCGCAGTCGATAGATACGGCCGG
AAGCTCGCCAGCGACGACACTAAGAAACAGCTTGAGCGATTCTACCAGCT
GGATGAGGATGCGCAGGAGGGAGAAGAAGAAGAGGAAGAAGGCGAGGGAG
AGGAAGATGATGGTCTCGAGGACGCTAGCGTTGCAGATGATGAGGAGGTG
CTTAGAGAGCTGAGGAAGGCGGAGACATACGATCCAGCCAGAGATGGAGG
ATTCGATGAGTCTTCTTCCTCGGAGGAGGAGAGCTCCGACGAGGAAGACG
AGGATGAAGAGGAGTTCGAAGGGTTTGGCGAGGAGCTGGAATATCCTGAT
AAGCACCGCGCGGATGTGCCGACTGGTGATGTTACGGACCGCATTGCGGT
GGTGAATCTCGATTGGGATAATATTCGCGCGGAGGACCTGATGGCTGTCT
TTTCCAGCTTTGCGCCGACTGGTGGGAAAGTGCTGAAGGTGGCTGTTTAT
CCTAGTGAGTTTGGCAAAGAGAGGATGGAGAGGGAGGAGACGGAGGGGCC
GCCCAGGGAGATTTTTGCGTCGAAGAAGGGTGGTGACTCCGACGATGAGG
ATGAGATGGATTCTGATGAGGAGGAAGAGAATATCAGGAAGTCTATGCTG
AAGGAGGATAAGGGCGAGGAGTTCAACTCGACACAGCTACGGAAGTATCA
GTTGGAACGGCTACGTTACTTCTACGCTATCTTGACTTTCTCGTCCAGGG
ACGTTGCGAAGCACGTTTATGACCTTGTCGATGGCGCCGAGTACTTGTCT
AGCGCTAACTTCTTCGATCTTCGCTTTGTGCCTGAGGACACCGATTTCTC
TGATGATACGCCCCGCGACGAGTGCGAACGCATCCCCGATGGATACCAGC
CGAACGAGTTCGTCACCGATGCGCTGCAGCACAGCAAGGTCAAGCTGACC
TGGGATATGGAGGATAAGTCGCGTAAGGAAGCCCAGGCTCGGGCCTTCCG
GGGTAGTCGCAAGGATATCGACGAGAACGACTTGAAGGCTTATCTGGCCA
GTGATAGCTCAGACGATGAGGAAGATGAGGGTGGTGTGGAGATTGTTGAT
ACTACGCGCGGCGATGGAGAAACGAAAAAGGTGTCTAAGAAGGAGGAGGA
GAAACAACGCCTTCGAGCCCTACTTGGTCTTGGTGCGGAGCCTACGCCTT
CGTCCAAGTCCGATGGCCCCGTTGGCGAGATGGAGGTTACCTTCACTTCC
GGTCTGGCTGGTGGCCCCAAGGGCGACAGCATCTTCGAGAACGAACCCGA
GAAGGATGAGACTACGATCGAGAAGTACATCCGCAAAGAGCGTGAGAGAA
AGAAGCGCAGAAAGGAGAAGCTCAAGGCCACCAAGCGTGGTGAGGATGGC
GAGCAGGACGAGGCCGCTGATGCCTCGGATGCTAAGGAGCAGCCCCAGCA
GGACGACTTGGGCTTTGATGATCCCTTCTTCGATGACCCCACTGGCAAGG
CTACTGAGGCTGCTCGTCGTAAGGAAGAGAAGCGCAAGAAGCGGGAGGAG
CGTGCAGCGGAGGAAGCCGCGGCCGCAGCCAAGCGGGCGGAGCTGGAGCT
GCTCATGATGGAGGACAACAACAAGCCGGGCATCAAGCACTTCGATATGA
ACGAGATTGAAAAGGCGGAGAAACAAGCTCGCAAGAAGGGCAAGAAGGGC
AAGGGTAAGGGCAAGCAAGTCGAAGTTCCCACAGATGATTTCGAGATGGA
AGTCACCGATCCTCGTTTCGCTCGACTCTACGAGAGCCACGAGTTCGCGA
TCGATCCCACCAACCCCCGATTCAAGGCGACTTCGGGTATGAAGGCACTG
TTGGAGGAGGGTCGCAAGCGACGCAGGGATCGGGATGAACATGCAGACGA
GGAGGATGCTCTTCGTGAACAAAAGAAGAAGCAGAAGAAGAGTGCGTCCA
AGGAGGGCGGGTCAGACGATCTGAAGAAGCTGGTTGAAAAGGTGAAGCAA
AAGACCAAACGCAACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002120-T1.utr5p1 | KJC3_002120-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002120-T1.utr3p1 | KJC3_002120-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261FAX |
| DBxref | InterPro:IPR012580 |
| DBxref | PFAM:PF08159 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1726504..1729498 + |
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