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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1755718..1757961- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002128-T1 ID=KJC3_002128-T1|Name=KJC3_002128-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2244bp|location=Sequence derived from alignment at ch2:1755718..1757961- (Aspergillus niger KJC3)
TATTTCCAAATACCCCCTCCCTCCTCCTCTTTCTTCTCTTCTCTTCTTCT
TCTTCTTCCTTCTTCTTCCCCATCTTCTTTCTTTCTTTCTCTCCTTCCCA
GCCACTTCCATCATCCATCCAGCCATCGCTATATCCACGGCGCCTTGTTT
CAGCCGTCAGTCACTCGTTGTATACTTCTAGACTTTCTTCCTCTTTCTCC
CTTGTATCTTAACTCTCCTGTGGAAAGTTGATACCTCGGGACTGCAGTGC
TTTCCATCTGCAGACTTAAAGAACCAGCTACATTGAATTCGGACTCTCGC
TTCACACATAACTGTTCACCATAATGAAGTTCTCCGCTACTACCCTTGCT
GGAGCTTCGCTCCTTCTGGGCCGCGCCATTGCCGCGGACCTGCCTGCCAT
TGAGGCCAAGGTATGTTTCCACCATCCGTTGCAGGGCTGGGGATCAAGTT
CCTAACTGGTCGGCACTGGGAATAGAGCAACAAGTTCTTCTACTCCAACA
ATGCCACCCAATTGTAAGTTGGTTCAAACTTCTGATATCTTTTCCGCATT
CCTTACTGACCAATGCTAGCTTCATCCGTGGCGTTGCCTATCAGCGTATG
TAGCTCAATCGTCCACAGCGCATCGACGCGCAGCTAACCCATCACCAGAG
GACTACACGAGCAACGGCACTGATTCCTCCAACGCGGACTACACCGACCC
TCTGGCCGATGCCTCCACCTGCAAGCGTGATATCCCCTACCTCCAGCAGC
TGCGCACCAACGTGATCCGTACCTATGCTGTCGACCCCACCAAGGACCAC
ACCGAGTGCATGCAGGCGCTGCAGGATGCTGGCATCTACCTCATCACTGA
CCTGTCGGCCCCCTCGACCTCCATCAACCGGGACGACCCCCAGTGGAACA
CCGACCTCTACTCTCGCTACACCAGCGTCGTCGATGCCTTTGCCAACTAC
ACCAACGTCATCGGTTTCTTCGCCGGTAACGAGGTTGCCAACAGCCAGAA
CAACACCAACGCCATTGCCTACGTCAAGGCCGCCGTGCGTGACATGAAGG
CCTACATCAAGGCCAAGAACTACCGTAGCTCCCTCGGCGTTGGTTATGCC
ACTGACGACGACTCCACCATCCGTGACGACCTGAAGAACTACCTGGTCTG
CGGTGATTCGGACGACCGCATCGACTTCTTCGGTTACAACATCTACGAGT
GGTGCGGTGACTCTTCCTTCAAGACCTCCGGTTACCAGGCCCGTACCGAG
GAGTTCAAGGACTACCCCGTCCCTGCCTTCTTCTCCGAGTATGGCTGCAA
CAGCCCCTCTCCCCGTACCTTCACCGATGTCCCCGTCCTCTTCGGTGACC
AGATGAACGACGTCTGGAGCGGTGGTATCGTCTACATGTACTTCCAGGAG
GACAACGACTACGGTCTGGTGTCGGTCGACGGCTCCAGCGTCAGCACCCT
CAAGGACTTCTCCAACCTGTCTTCCCAGATGCTGAAGGCCACCGCCACCG
GTGTGAACAGCAACAGCTGGTCCGCTAGCAACACTGCCACCCCTACTTGC
CCTAGCGTCGGCACCGCCTGGGAGGCCACCAACACTCTGCCCCCCTCCCC
CAACGAGGATCTCTGCTCCTGCATGGAGGCTTCTCTGTCTTGCGTCGTCA
AGGACTCGGTCAAGGAGAGCAAGTACGGTGACCTGTTCGACTACATCTGC
GCCAAGGGTGACTACTGCGCCGGCATGTCCAGCAACTCGACCACCGGTGA
CTACGGTGCCTACAGTGTCTGCTCCACCAAGCAGCAGCTCAGCTTCGTCA
TGAACCAGTACTACGAGAAGCAGAGCGCCAAGGCCAGCGCTTGCGACTTC
AGCGGTGATGGTACCACCACCTCTTCCAGCGCCGCCACTGGCACCTGCTC
TTCCCTGCTCAAGGAGGCTGGCACCGCCGGTACCGGCAGCGTTACTTCCT
CCCCCACCGGCGGCGGCTCCGTTGCCAGCGCCAGCTCCAGCACCTCCGAG
GGTGCTGGTGCCGGTCTGTCTGCCCCTAACGCTGTCCAGGTCGGCAGCTG
GCAGCTGGGTGCCTATGCGGTGACCGCCGTTGGCGCCGCTCTTGGCATGA
TCCTGCTGTAAGCACGAAGCGGAAGTGTGGGGCCCCTTTTTTTTCCTGGC
CCGTGAAGACTGGTGGATTTGTTAGCCGTACATAATTGAATCCGTTCTAC
TTTGTGATTATTCCAAGTAGCATTTAATGCACATATTTTGTATC back to topCoding sequence (CDS) from alignment at ch2:1755718..1757961- >KJC3_002128-T1 ID=KJC3_002128-T1|Name=KJC3_002128-T1|organism=Aspergillus niger KJC3|type=CDS|length=1302bp|location=Sequence derived from alignment at ch2:1755718..1757961- (Aspergillus niger KJC3)
ATGCAGGCGCTGCAGGATGCTGGCATCTACCTCATCACTGACCTGTCGGC
CCCCTCGACCTCCATCAACCGGGACGACCCCCAGTGGAACACCGACCTCT
ACTCTCGCTACACCAGCGTCGTCGATGCCTTTGCCAACTACACCAACGTC
ATCGGTTTCTTCGCCGGTAACGAGGTTGCCAACAGCCAGAACAACACCAA
CGCCATTGCCTACGTCAAGGCCGCCGTGCGTGACATGAAGGCCTACATCA
AGGCCAAGAACTACCGTAGCTCCCTCGGCGTTGGTTATGCCACTGACGAC
GACTCCACCATCCGTGACGACCTGAAGAACTACCTGGTCTGCGGTGATTC
GGACGACCGCATCGACTTCTTCGGTTACAACATCTACGAGTGGTGCGGTG
ACTCTTCCTTCAAGACCTCCGGTTACCAGGCCCGTACCGAGGAGTTCAAG
GACTACCCCGTCCCTGCCTTCTTCTCCGAGTATGGCTGCAACAGCCCCTC
TCCCCGTACCTTCACCGATGTCCCCGTCCTCTTCGGTGACCAGATGAACG
ACGTCTGGAGCGGTGGTATCGTCTACATGTACTTCCAGGAGGACAACGAC
TACGGTCTGGTGTCGGTCGACGGCTCCAGCGTCAGCACCCTCAAGGACTT
CTCCAACCTGTCTTCCCAGATGCTGAAGGCCACCGCCACCGGTGTGAACA
GCAACAGCTGGTCCGCTAGCAACACTGCCACCCCTACTTGCCCTAGCGTC
GGCACCGCCTGGGAGGCCACCAACACTCTGCCCCCCTCCCCCAACGAGGA
TCTCTGCTCCTGCATGGAGGCTTCTCTGTCTTGCGTCGTCAAGGACTCGG
TCAAGGAGAGCAAGTACGGTGACCTGTTCGACTACATCTGCGCCAAGGGT
GACTACTGCGCCGGCATGTCCAGCAACTCGACCACCGGTGACTACGGTGC
CTACAGTGTCTGCTCCACCAAGCAGCAGCTCAGCTTCGTCATGAACCAGT
ACTACGAGAAGCAGAGCGCCAAGGCCAGCGCTTGCGACTTCAGCGGTGAT
GGTACCACCACCTCTTCCAGCGCCGCCACTGGCACCTGCTCTTCCCTGCT
CAAGGAGGCTGGCACCGCCGGTACCGGCAGCGTTACTTCCTCCCCCACCG
GCGGCGGCTCCGTTGCCAGCGCCAGCTCCAGCACCTCCGAGGGTGCTGGT
GCCGGTCTGTCTGCCCCTAACGCTGTCCAGGTCGGCAGCTGGCAGCTGGG
TGCCTATGCGGTGACCGCCGTTGGCGCCGCTCTTGGCATGATCCTGCTGT
AA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002128-T1.utr3p1 | KJC3_002128-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:CBM43 |
| Note | CAZy:GH72 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR004886 |
| DBxref | InterPro:IPR012946 |
| DBxref | PFAM:PF07983 |
| DBxref | PFAM:PF03198 |
| Product | 3 glucanosyltransferase |
| Product | beta-1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1755718..1757961 - |
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