You are here

Home

KJC3_002136-T1, KJC3_002136-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002136-T1
Unique NameKJC3_002136-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1783557..1784565+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002136-T1 ID=KJC3_002136-T1|Name=KJC3_002136-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1009bp|location=Sequence derived from alignment at ch2:1783557..1784565+ (Aspergillus niger KJC3)
GCTATATTACAAATCCCAGCATGTAGAGACCAAGACTTATCTACATATAT
AAAGCCGACCAACACAGTCCCTATCCCCCATTATCCTATTCATCTTCACC
CATCTCCAGCCCTTCATCCTATACTCAGCAACCACTATACCCTCACGTCA
AAATGTGCCACGACAAGATCCCCCTCAACGGCTGGACCAGCACCCCCGCC
AACGCTGGTGCCATCTTCCCCGACAAGCCCTTCATCCACCCACCCACGCC
CATCTCCATCACCGACATCCCCTTCCCCTCCACCGATCCCCTCGTCGCCA
AGACCCTCGAATACGTCCAATCCCTCCTCCCCCGCGAGACCGTCAACCAC
TCCATGCGCGTATACTCCTACGGTACCCCCTCCCCCAATACCAACCCTAG
ACCACCCCTCGCTAACAAGAAGTAATTAGGAATGATCCTCCTCACCCAGC
AATTCCCTTCCCACCATCTATCTCCAACAACCTGGGCCCTAACCTGCCTT
CTGCATGACATCGGCACCGCCCCCTCCCTCCTCACCTCAACAAACATGTC
CTTTGACCTCTACGGCGGCATCAAAGCCCACTCCGTACTTACTTCCTTCG
ACTGTCCCGCTGATGTTGCTGACGCCGTAGCGGAAGCTATTATCCGGCAT
CAGGATCTAGGCGTGGATGGGAATATCACGTTCCTGGGACAGTTGATCCA
GCTGGCTACCATTTATGATAATGTGGGGGAACATCCGCACGTCAAGGACT
TTGGAGGGTTGATTCATGAGGATGCGAGGAGGGAGGTTAATGAGCGCTGG
AGAAGGGAGGGATGGTGTGGGGTGTTTGCTGATGTGGTGAAGTTGGAGGT
GGGGAGGAAGCCGTGGTGTCATTCGACGCATATTGTGGGGTTTGAGGGGA
AGGTTAGGGGGAATGCGCTTTTTGGGGAGAAATAGGGAGATTTGGGTTAT
TGGTGTGGTGTTAGATTGGGAGGTGAGCGTCAGTAGCTTTAGATTGATTC
CGAACGTGG
back to top

Coding sequence (CDS) from alignment at ch2:1783557..1784565+

>KJC3_002136-T1 ID=KJC3_002136-T1|Name=KJC3_002136-T1|organism=Aspergillus niger KJC3|type=CDS|length=1452bp|location=Sequence derived from alignment at ch2:1783557..1784565+ (Aspergillus niger KJC3)
ATGTGCCACGACAAGATCCCCCTCAACGGCTGGACCAGCACCCCCGCCAA
CGCTGGTGCCATCTTCCCCGACAAGCCCTTCATCCACCCACCCACGCCCA
TCTCCATCACCGACATCCCCTTCCCCTCCACCGATCCCCTCGTCGCCAAG
ACCCTCGAATACGTCCAATCCCTCCTCCCCCGCGAGACCGTCAACCACTC
CATGCGCGTATACTCCTACGGAATGATCCTCCTCACCCAGCAATTCCCTT
CCCACCATCTATCTCCAACAACCTGGGCCCTAACCTGCCTTCTGCATGAC
ATCGGCACCGCCCCCTCCCTCCTCACCTCAACAAACATGTCCTTTGACCT
CTACGGCGGCATCAAAGCCCACTCCGTACTTACTTCCTTCGACTGTCCCG
CTGATGTTGCTGACGCCGTAGCGGAAGCTATTATCCGGCATCAGGATCTA
GGCGTGGATGGGAATATCACGTTCCTGGGACAGTTGATCCAGCTGGCTAC
CATTTATGATAATGTGGGGGAACATCCGCACGTCAAGGACTTTGGAGGGT
TGATTCATGAGGATGCGAGGAGGGAGGTTAATGAGCGCTGGAGAAGGGAG
GGATGGTGTGGGGTGTTTGCTGATGTGGTGAAGTTGGAGGTGGGGAGGAA
GCCGTGGTGTCATTCGACGCATATTGTGGGGTTTGAGGGGAAGGTTAGGG
GGAATGCGCTTTTTGGGGAGAAATAGATGTGCCACGACAAGATCCCCCTC
AACGGCTGGACCAGCACCCCCGCCAACGCTGGTGCCATCTTCCCCGACAA
GCCCTTCATCCACCCACCCACGCCCATCTCCATCACCGACATCCCCTTCC
CCTCCACCGATCCCCTCGTCGCCAAGACCCTCGAATACGTCCAATCCCTC
CTCCCCCGCGAGACCGTCAACCACTCCATGCGCGTATACTCCTACGGAAT
GATCCTCCTCACCCAGCAATTCCCTTCCCACCATCTATCTCCAACAACCT
GGGCCCTAACCTGCCTTCTGCATGACATCGGCACCGCCCCCTCCCTCCTC
ACCTCAACAAACATGTCCTTTGACCTCTACGGCGGCATCAAAGCCCACTC
CGTACTTACTTCCTTCGACTGTCCCGCTGATGTTGCTGACGCCGTAGCGG
AAGCTATTATCCGGCATCAGGATCTAGGCGTGGATGGGAATATCACGTTC
CTGGGACAGTTGATCCAGCTGGCTACCATTTATGATAATGTGGGGGAACA
TCCGCACGTCAAGGACTTTGGAGGGTTGATTCATGAGGATGCGAGGAGGG
AGGTTAATGAGCGCTGGAGAAGGGAGGGATGGTGTGGGGTGTTTGCTGAT
GTGGTGAAGTTGGAGGTGGGGAGGAAGCCGTGGTGTCATTCGACGCATAT
TGTGGGGTTTGAGGGGAAGGTTAGGGGGAATGCGCTTTTTGGGGAGAAAT
AG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002136KJC3_002136Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002136-T1.utr5p1KJC3_002136-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002136-T1.exon1KJC3_002136-T1.exon1Aspergillus niger KJC3exon
KJC3_002136-T1.exon2KJC3_002136-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002136-T1.cdsKJC3_002136-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002136-T1.utr3p1KJC3_002136-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002136-T1KJC3_002136-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR017771
DBxrefInterPro:IPR003607
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1783557..1784565 +
Powered by Drupal