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KJC3_002209-T1, KJC3_002209-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002209-T1
Unique NameKJC3_002209-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1972664..1973905+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002209-T1 ID=KJC3_002209-T1|Name=KJC3_002209-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1242bp|location=Sequence derived from alignment at ch2:1972664..1973905+ (Aspergillus niger KJC3)
ATGGAGAACATACCTCGATTCAGTGGCAAAGGACGGGAAATATCAGTCTC
TCCTCGGCGAAAGACACTGGCTGGACTCTTCGACAACTTGTCCATCTCAC
CCTCAATGAGCACGACGACATCTACCAGTATGAAAAGCGCTATAAGCAGT
GCTTTTAAGGCTCGGGGATGGCCCCCCTCTATATCAAAGGGCTCACATGC
GAACGAAAGCCGTCTCTACTACACAATATCCATGGACTCGAACGCACGGG
CATATATTCCCCTCGATGAAGACTCTCCGAAGGACCTGTTCAAGAAAGCA
ACGGATTTCTATAACATTATCCAGGAGAAACTGAAAGACAAGGGCAACGA
GGGTACAGCAATTATCAGTGACACTCTGACACGTCATCTGGGCACCGTGA
TCTTCGGTAGTAACTACATTGAACGTGCCGGTCTCAACCTAGAAGAGACG
ATCAAGATCTGCGAAATTATATTCCGTGGGGAATTTGTAGATCCAGAAAA
AATACCAGAAAGGTAAGGTAACCGCAGTTAAAATATTCTTTTCGTTGTGA
TAATAGCTAATCAAGATGTGTGCTTCTTTAGAGAGTCAGATTACGAGAAG
AAACTGATCGAGGCGATCCGATCTAAGACCCCTGCATCCCATATCATCCG
CAGCCGACGAGAGGTAGTTCAACATGCGTTGGCGTTGAACTTTCTGATCA
ATGAAATGGTTGTCAAGGACAAACCGCTTTCCGAGGACCTGATCCTTCGC
ACCCATCGGATTCTGACCGAATATATCGACACGGCTGGAGGAATCCCTTG
GATGGAATACTCGGGCAGGTACAGGAATGTACATGTTCATGCGGGAAATA
CGAACTTCGTTGCCCCCAATTATGTGCCAGCCAAGATGAGAGAGCTGGTT
GCCGACTTCGAAAGAGACGTTCATAAAATCGAATCTACTCGCGTCCTTGA
TCCATTCACCCTGGCTGCCAAGTACTGCAATGACTTTGTGATGATTCATC
CTTTTGCAGACGGCAATGGAAGAATGTGCCGATTGATCATGAACGCAATA
CTGTTGAAGTACGCCGGAATCGTTGTCTGTCTCGGCGAGCACGATGAGAG
CCGTCGGCAATACATCGACATACAGAAGCGGGCTGGAGAACGTATGGAAG
GTTCGGGAGAGCTTGCTGCCCTGATTCTCAAGAAATCAATTGCTAGATAT
CGAACCATCAAACAGAAGATTAGCGGAAAGAAGCGGGGTTGA
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Coding sequence (CDS) from alignment at ch2:1972664..1973905+

>KJC3_002209-T1 ID=KJC3_002209-T1|Name=KJC3_002209-T1|organism=Aspergillus niger KJC3|type=CDS|length=2346bp|location=Sequence derived from alignment at ch2:1972664..1973905+ (Aspergillus niger KJC3)
ATGGAGAACATACCTCGATTCAGTGGCAAAGGACGGGAAATATCAGTCTC
TCCTCGGCGAAAGACACTGGCTGGACTCTTCGACAACTTGTCCATCTCAC
CCTCAATGAGCACGACGACATCTACCAGTATGAAAAGCGCTATAAGCAGT
GCTTTTAAGGCTCGGGGATGGCCCCCCTCTATATCAAAGGGCTCACATGC
GAACGAAAGCCGTCTCTACTACACAATATCCATGGACTCGAACGCACGGG
CATATATTCCCCTCGATGAAGACTCTCCGAAGGACCTGTTCAAGAAAGCA
ACGGATTTCTATAACATTATCCAGGAGAAACTGAAAGACAAGGGCAACGA
GGGTACAGCAATTATCAGTGACACTCTGACACGTCATCTGGGCACCGTGA
TCTTCGGTAGTAACTACATTGAACGTGCCGGTCTCAACCTAGAAGAGACG
ATCAAGATCTGCGAAATTATATTCCGTGGGGAATTTGTAGATCCAGAAAA
AATACCAGAAAGAGAGTCAGATTACGAGAAGAAACTGATCGAGGCGATCC
GATCTAAGACCCCTGCATCCCATATCATCCGCAGCCGACGAGAGGTAGTT
CAACATGCGTTGGCGTTGAACTTTCTGATCAATGAAATGGTTGTCAAGGA
CAAACCGCTTTCCGAGGACCTGATCCTTCGCACCCATCGGATTCTGACCG
AATATATCGACACGGCTGGAGGAATCCCTTGGATGGAATACTCGGGCAGG
TACAGGAATGTACATGTTCATGCGGGAAATACGAACTTCGTTGCCCCCAA
TTATGTGCCAGCCAAGATGAGAGAGCTGGTTGCCGACTTCGAAAGAGACG
TTCATAAAATCGAATCTACTCGCGTCCTTGATCCATTCACCCTGGCTGCC
AAGTACTGCAATGACTTTGTGATGATTCATCCTTTTGCAGACGGCAATGG
AAGAATGTGCCGATTGATCATGAACGCAATACTGTTGAAGTACGCCGGAA
TCGTTGTCTGTCTCGGCGAGCACGATGAGAGCCGTCGGCAATACATCGAC
ATACAGAAGCGGGCTGGAGAACGTATGGAAGGTTCGGGAGAGCTTGCTGC
CCTGATTCTCAAGAAATCAATTGCTAGATATCGAACCATCAAACAGAAGA
TTAGCGGAAAGAAGCGGGGTTGAATGGAGAACATACCTCGATTCAGTGGC
AAAGGACGGGAAATATCAGTCTCTCCTCGGCGAAAGACACTGGCTGGACT
CTTCGACAACTTGTCCATCTCACCCTCAATGAGCACGACGACATCTACCA
GTATGAAAAGCGCTATAAGCAGTGCTTTTAAGGCTCGGGGATGGCCCCCC
TCTATATCAAAGGGCTCACATGCGAACGAAAGCCGTCTCTACTACACAAT
ATCCATGGACTCGAACGCACGGGCATATATTCCCCTCGATGAAGACTCTC
CGAAGGACCTGTTCAAGAAAGCAACGGATTTCTATAACATTATCCAGGAG
AAACTGAAAGACAAGGGCAACGAGGGTACAGCAATTATCAGTGACACTCT
GACACGTCATCTGGGCACCGTGATCTTCGGTAGTAACTACATTGAACGTG
CCGGTCTCAACCTAGAAGAGACGATCAAGATCTGCGAAATTATATTCCGT
GGGGAATTTGTAGATCCAGAAAAAATACCAGAAAGAGAGTCAGATTACGA
GAAGAAACTGATCGAGGCGATCCGATCTAAGACCCCTGCATCCCATATCA
TCCGCAGCCGACGAGAGGTAGTTCAACATGCGTTGGCGTTGAACTTTCTG
ATCAATGAAATGGTTGTCAAGGACAAACCGCTTTCCGAGGACCTGATCCT
TCGCACCCATCGGATTCTGACCGAATATATCGACACGGCTGGAGGAATCC
CTTGGATGGAATACTCGGGCAGGTACAGGAATGTACATGTTCATGCGGGA
AATACGAACTTCGTTGCCCCCAATTATGTGCCAGCCAAGATGAGAGAGCT
GGTTGCCGACTTCGAAAGAGACGTTCATAAAATCGAATCTACTCGCGTCC
TTGATCCATTCACCCTGGCTGCCAAGTACTGCAATGACTTTGTGATGATT
CATCCTTTTGCAGACGGCAATGGAAGAATGTGCCGATTGATCATGAACGC
AATACTGTTGAAGTACGCCGGAATCGTTGTCTGTCTCGGCGAGCACGATG
AGAGCCGTCGGCAATACATCGACATACAGAAGCGGGCTGGAGAACGTATG
GAAGGTTCGGGAGAGCTTGCTGCCCTGATTCTCAAGAAATCAATTGCTAG
ATATCGAACCATCAAACAGAAGATTAGCGGAAAGAAGCGGGGTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002209KJC3_002209Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002209-T1.exon1KJC3_002209-T1.exon1Aspergillus niger KJC3exon
KJC3_002209-T1.exon2KJC3_002209-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002209-T1.cdsKJC3_002209-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002209-T1KJC3_002209-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036597
DBxrefInterPro:IPR003812
DBxrefPFAM:PF02661
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1972664..1973905 +
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