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KJC3_002211-T1, KJC3_002211-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002211-T1
Unique NameKJC3_002211-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1980595..1981895+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002211-T1 ID=KJC3_002211-T1|Name=KJC3_002211-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1301bp|location=Sequence derived from alignment at ch2:1980595..1981895+ (Aspergillus niger KJC3)
ATGATTATCGTACTTCCTGATGGCATTTCAGGTCAGCTAATCGAGGATCA
CTCTGCCCCTCCGCCTTCCGTAAAGTGGGCTGAGGAGGGATATACTGTCA
TCCAGATATGTGAATCTGCCCTCAGCCAGGAAACCGTGTTGTGCCAGGCG
GTAGAGGAATTGGCGCAACATGACAAGTGCACGCCAAACGATATTATTGG
TCTTATAGGTGAGGCTCTCACTCTAGCCCTCGCACTCAGGACTATTGCTT
ATTGAGACCGCAGCATATGGCTTTCATCTATGGGAAAGCCTGAAATCTCT
TCCCGGCATCGAGAGAATCACGGCAGCTGTTGTGTACGCGGCAGCAAGCA
ACGCAACTCAGTTGATCTCAAGCGGCATTCCCACAATGTACCATCTAGCT
GGGAAAGCGAATACACCATTACAAAGAGCATTCAGTACAATGCAATATGA
CTATCCAAACATAGAAAGCCAGTTCTTTGCCCTCCCAAATTCTACCGCAT
TCGATTATGCCACGGAGGGAGTCTCACATACGCGAAGCTTGACCTTCCTA
AAAAAGCACATGAATGGCCCATTCTTCGACCTAGAGGTTATCTGGGAAGA
ACATACTTATTTTGAATTCGACAATCGATCAGTTGAGCAAACAATGGCAA
CAATGGTGCAAGAGCGCTATGTGAATCATATCCCAACGGTTAGTAGCATG
TAACCCAGTCATTAGTGTCTCAATTCAACCGGCTGACGCATTGTCTGAAG
ATGACGGGCGGGATTGGCCGTGATGAGCTCACCAGATTCTATCGCGACCA
TTTCATTTTCAACAACCCCCCAGATACCAAGAATGAATTGATAAGTCGGA
CTATCGGTATTGATCGGGTAGTTGATAAGTTTATAATGACTTTCACACAT
GATTCTGAAGTCGATTGGTTGTAAGTGATACCTTCCCATGTCCTGCATTA
TACATTCATAGTTATTTATACCGCTGTACTGATGGACCTTCCAGAATCCC
TGGGATCCCTCCAACCGGCCGCAAGCTGGAGATCCCGTTCATGGCAGTGG
TCAATATCCGAGGAGATCGCCTTTACCACGAACACATCACCTGGTACCAA
GCCACTGTCCTCAAGCAGCTGGGCCTTATGCCAGAGTTTCTACCATTTCC
ATATCCACTTACTGGTGGGAAGAGGCCGGCCCACGGAAGAAGCTTTGAAG
TTCGAGCACCGGTTGCAGGGGCTGAGACAGCAGCAAAAATGCGTCATAAG
AGCTCTGTTCCGTCGAACCAGTTGTTCGAGGGGGGCATTCGGGAAGTTTG
A
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Coding sequence (CDS) from alignment at ch2:1980595..1981895+

>KJC3_002211-T1 ID=KJC3_002211-T1|Name=KJC3_002211-T1|organism=Aspergillus niger KJC3|type=CDS|length=4440bp|location=Sequence derived from alignment at ch2:1980595..1981895+ (Aspergillus niger KJC3)
ATGATTATCGTACTTCCTGATGGCATTTCAGGTCAGCTAATCGAGGATCA
CTCTGCCCCTCCGCCTTCCGTAAAGTGGGCTGAGGAGGGATATACTGTCA
TCCAGATATGTGAATCTGCCCTCAGCCAGGAAACCGTGTTGTGCCAGGCG
GTAGAGGAATTGGCGCAACATGACAAGTGCACGCCAAACGATATTATTGG
TCTTATAGCATATGGCTTTCATCTATGGGAAAGCCTGAAATCTCTTCCCG
GCATCGAGAGAATCACGGCAGCTGTTGTGTACGCGGCAGCAAGCAACGCA
ACTCAGTTGATCTCAAGCGGCATTCCCACAATGTACCATCTAGCTGGGAA
AGCGAATACACCATTACAAAGAGCATTCAGTACAATGCAATATGACTATC
CAAACATAGAAAGCCAGTTCTTTGCCCTCCCAAATTCTACCGCATTCGAT
TATGCCACGGAGGGAGTCTCACATACGCGAAGCTTGACCTTCCTAAAAAA
GCACATGAATGGCCCATTCTTCGACCTAGAGGTTATCTGGGAAGAACATA
CTTATTTTGAATTCGACAATCGATCAGTTGAGCAAACAATGGCAACAATG
GTGCAAGAGCGCTATGTGAATCATATCCCAACGATGACGGGCGGGATTGG
CCGTGATGAGCTCACCAGATTCTATCGCGACCATTTCATTTTCAACAACC
CCCCAGATACCAAGAATGAATTGATAAGTCGGACTATCGGTATTGATCGG
GTAGTTGATAAGTTTATAATGACTTTCACACATGATTCTGAAGTCGATTG
GTTAATCCCTGGGATCCCTCCAACCGGCCGCAAGCTGGAGATCCCGTTCA
TGGCAGTGGTCAATATCCGAGGAGATCGCCTTTACCACGAACACATCACC
TGGTACCAAGCCACTGTCCTCAAGCAGCTGGGCCTTATGCCAGAGTTTCT
ACCATTTCCATATCCACTTACTGGTGGGAAGAGGCCGGCCCACGGAAGAA
GCTTTGAAGTTCGAGCACCGGTTGCAGGGGCTGAGACAGCAGCAAAAATG
CGTCATAAGAGCTCTGTTCCGTCGAACCAGTTGTTCGAGGGGGGCATTCG
GGAAGTTTGAATGATTATCGTACTTCCTGATGGCATTTCAGGTCAGCTAA
TCGAGGATCACTCTGCCCCTCCGCCTTCCGTAAAGTGGGCTGAGGAGGGA
TATACTGTCATCCAGATATGTGAATCTGCCCTCAGCCAGGAAACCGTGTT
GTGCCAGGCGGTAGAGGAATTGGCGCAACATGACAAGTGCACGCCAAACG
ATATTATTGGTCTTATAGCATATGGCTTTCATCTATGGGAAAGCCTGAAA
TCTCTTCCCGGCATCGAGAGAATCACGGCAGCTGTTGTGTACGCGGCAGC
AAGCAACGCAACTCAGTTGATCTCAAGCGGCATTCCCACAATGTACCATC
TAGCTGGGAAAGCGAATACACCATTACAAAGAGCATTCAGTACAATGCAA
TATGACTATCCAAACATAGAAAGCCAGTTCTTTGCCCTCCCAAATTCTAC
CGCATTCGATTATGCCACGGAGGGAGTCTCACATACGCGAAGCTTGACCT
TCCTAAAAAAGCACATGAATGGCCCATTCTTCGACCTAGAGGTTATCTGG
GAAGAACATACTTATTTTGAATTCGACAATCGATCAGTTGAGCAAACAAT
GGCAACAATGGTGCAAGAGCGCTATGTGAATCATATCCCAACGATGACGG
GCGGGATTGGCCGTGATGAGCTCACCAGATTCTATCGCGACCATTTCATT
TTCAACAACCCCCCAGATACCAAGAATGAATTGATAAGTCGGACTATCGG
TATTGATCGGGTAGTTGATAAGTTTATAATGACTTTCACACATGATTCTG
AAGTCGATTGGTTAATCCCTGGGATCCCTCCAACCGGCCGCAAGCTGGAG
ATCCCGTTCATGGCAGTGGTCAATATCCGAGGAGATCGCCTTTACCACGA
ACACATCACCTGGTACCAAGCCACTGTCCTCAAGCAGCTGGGCCTTATGC
CAGAGTTTCTACCATTTCCATATCCACTTACTGGTGGGAAGAGGCCGGCC
CACGGAAGAAGCTTTGAAGTTCGAGCACCGGTTGCAGGGGCTGAGACAGC
AGCAAAAATGCGTCATAAGAGCTCTGTTCCGTCGAACCAGTTGTTCGAGG
GGGGCATTCGGGAAGTTTGAATGATTATCGTACTTCCTGATGGCATTTCA
GGTCAGCTAATCGAGGATCACTCTGCCCCTCCGCCTTCCGTAAAGTGGGC
TGAGGAGGGATATACTGTCATCCAGATATGTGAATCTGCCCTCAGCCAGG
AAACCGTGTTGTGCCAGGCGGTAGAGGAATTGGCGCAACATGACAAGTGC
ACGCCAAACGATATTATTGGTCTTATAGCATATGGCTTTCATCTATGGGA
AAGCCTGAAATCTCTTCCCGGCATCGAGAGAATCACGGCAGCTGTTGTGT
ACGCGGCAGCAAGCAACGCAACTCAGTTGATCTCAAGCGGCATTCCCACA
ATGTACCATCTAGCTGGGAAAGCGAATACACCATTACAAAGAGCATTCAG
TACAATGCAATATGACTATCCAAACATAGAAAGCCAGTTCTTTGCCCTCC
CAAATTCTACCGCATTCGATTATGCCACGGAGGGAGTCTCACATACGCGA
AGCTTGACCTTCCTAAAAAAGCACATGAATGGCCCATTCTTCGACCTAGA
GGTTATCTGGGAAGAACATACTTATTTTGAATTCGACAATCGATCAGTTG
AGCAAACAATGGCAACAATGGTGCAAGAGCGCTATGTGAATCATATCCCA
ACGATGACGGGCGGGATTGGCCGTGATGAGCTCACCAGATTCTATCGCGA
CCATTTCATTTTCAACAACCCCCCAGATACCAAGAATGAATTGATAAGTC
GGACTATCGGTATTGATCGGGTAGTTGATAAGTTTATAATGACTTTCACA
CATGATTCTGAAGTCGATTGGTTAATCCCTGGGATCCCTCCAACCGGCCG
CAAGCTGGAGATCCCGTTCATGGCAGTGGTCAATATCCGAGGAGATCGCC
TTTACCACGAACACATCACCTGGTACCAAGCCACTGTCCTCAAGCAGCTG
GGCCTTATGCCAGAGTTTCTACCATTTCCATATCCACTTACTGGTGGGAA
GAGGCCGGCCCACGGAAGAAGCTTTGAAGTTCGAGCACCGGTTGCAGGGG
CTGAGACAGCAGCAAAAATGCGTCATAAGAGCTCTGTTCCGTCGAACCAG
TTGTTCGAGGGGGGCATTCGGGAAGTTTGAATGATTATCGTACTTCCTGA
TGGCATTTCAGGTCAGCTAATCGAGGATCACTCTGCCCCTCCGCCTTCCG
TAAAGTGGGCTGAGGAGGGATATACTGTCATCCAGATATGTGAATCTGCC
CTCAGCCAGGAAACCGTGTTGTGCCAGGCGGTAGAGGAATTGGCGCAACA
TGACAAGTGCACGCCAAACGATATTATTGGTCTTATAGCATATGGCTTTC
ATCTATGGGAAAGCCTGAAATCTCTTCCCGGCATCGAGAGAATCACGGCA
GCTGTTGTGTACGCGGCAGCAAGCAACGCAACTCAGTTGATCTCAAGCGG
CATTCCCACAATGTACCATCTAGCTGGGAAAGCGAATACACCATTACAAA
GAGCATTCAGTACAATGCAATATGACTATCCAAACATAGAAAGCCAGTTC
TTTGCCCTCCCAAATTCTACCGCATTCGATTATGCCACGGAGGGAGTCTC
ACATACGCGAAGCTTGACCTTCCTAAAAAAGCACATGAATGGCCCATTCT
TCGACCTAGAGGTTATCTGGGAAGAACATACTTATTTTGAATTCGACAAT
CGATCAGTTGAGCAAACAATGGCAACAATGGTGCAAGAGCGCTATGTGAA
TCATATCCCAACGATGACGGGCGGGATTGGCCGTGATGAGCTCACCAGAT
TCTATCGCGACCATTTCATTTTCAACAACCCCCCAGATACCAAGAATGAA
TTGATAAGTCGGACTATCGGTATTGATCGGGTAGTTGATAAGTTTATAAT
GACTTTCACACATGATTCTGAAGTCGATTGGTTAATCCCTGGGATCCCTC
CAACCGGCCGCAAGCTGGAGATCCCGTTCATGGCAGTGGTCAATATCCGA
GGAGATCGCCTTTACCACGAACACATCACCTGGTACCAAGCCACTGTCCT
CAAGCAGCTGGGCCTTATGCCAGAGTTTCTACCATTTCCATATCCACTTA
CTGGTGGGAAGAGGCCGGCCCACGGAAGAAGCTTTGAAGTTCGAGCACCG
GTTGCAGGGGCTGAGACAGCAGCAAAAATGCGTCATAAGAGCTCTGTTCC
GTCGAACCAGTTGTTCGAGGGGGGCATTCGGGAAGTTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002211KJC3_002211Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002211-T1.exon1KJC3_002211-T1.exon1Aspergillus niger KJC3exon
KJC3_002211-T1.exon2KJC3_002211-T1.exon2Aspergillus niger KJC3exon
KJC3_002211-T1.exon3KJC3_002211-T1.exon3Aspergillus niger KJC3exon
KJC3_002211-T1.exon4KJC3_002211-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002211-T1.cdsKJC3_002211-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002211-T1KJC3_002211-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR032710
DBxrefInterPro:IPR037401
DBxrefPFAM:PF12680
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1980595..1981895 +
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