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KJC3_002257-T1, KJC3_002257-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002257-T1
Unique NameKJC3_002257-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2090352..2093116-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002257-T1 ID=KJC3_002257-T1|Name=KJC3_002257-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2765bp|location=Sequence derived from alignment at ch2:2090352..2093116- (Aspergillus niger KJC3)
ACTCAGGCACCAGGTTCGTACACCTGGGCTTTTGGAGGTTCCCTCACCAG
ATTCCGAACTTCATATACCTATCTTTAGGTGCGTTATTGAGCATTCATAC
TCTCGATATCTGAGCTATTGCAGATTCTACCTCTGAACAGGTGCCATTAT
GTGTGGGAAACACTATCATTTCTCGTGGTGGTGGTGTGAGCAAGGCAAGT
TCTTTGGATTCCTCTGCATCATATCTCCAAATCTTATTACGGGGGAGTGA
ACACTATGTAGCTTTCTTCCTCACGTACCCATGGCCAGAATTTCGTTGAA
TATTAACGGTGCCTTAGGAATATGTCCGCTCAAATAGGATAGATGGCACA
GCCCAAATCACCTTTATGCGAAATGAAATGGTCAAAGGTCCGTCATCTTA
GGCTTGGCTTTGTGGTGTATATGACCTCAGTATTTCGTCGAGCAAGGGCC
TGTGTGGAAGATTCCAGTACTGCAGTTTCGGTGTCTCAGAGTCATCTTCG
TCATACCTATGCAGAGCCGGAACTACCACATTCTAATTAACCGGTAGTGA
CATCTGTGTATATAAAGGAGACATTACCTTTGCCCTCTTGCATTTAAGCG
GTCTCTTTACGTATAATGCACCCCCTGTCCACCACCAGATCCCTCGGTCA
GAATAACCACAAGCAGCCAACATGAACATGTCCGAATTAAAGAGAGAACT
CTGCAGACTCTGCAAAAGGGGAACTAAAACACTCTTTGCTGCCGTCCGCG
AAGGGCACAAGGAGTGCGTCCAGATAATCCTGGAAGACCCTGGGATGTTC
CCAGTGTTTGAGGCCACGAAGGCCCTCGGATATGCCGTGCGATATAACCA
GCTTGAAATTGCTTGGCTCGTGCTTGAGGCTGGGGCCTACCCAAGCCCTG
AATTGGATGGCGACACATGGGATACCTCACCCCTCCATCATGCAACTATC
AAAAGCAACTTGGAGATGGTGAAGCTCCTACTCGAGTTCAAAGCTGACGT
TGACCAGTCGGACCTGGTCACCCGCATGATACCCCTGTCTACTGCTACAG
CACTGGGCCACACCGAAATCGTCCGCTGCTTGCTGGAATCCGAAGCTGAT
GTCAACCTGGAGAACAGGTATGGCGAGGCACCTCTCCATATTGCCACTCG
GCTTGGGCACCTGGAAATTACCCAGCTCCTTCTCGCTCGAGGGGCTGACG
TGGACAAACTTGTTGCAGGTAAAAATCCTCTGTACTTCGCGTGCAAACGT
GACCATGTCAACATGGTCCGGGTCCTCTTGGCCAACACTCCGAAGCCAAA
CCTGAACCTGGGAAGTGGGCGGGAGCAACCGTTGTCAATAGCAATCTACC
ACGGCTACACCGAGATCGTCGCCCTGCTGTTGGAGGCCGGCGTGGATGTC
AACCGCATGTGCGGGGAGATCTATACCCCGCTCGAATGGGCCGTAAAGCA
TAACTGTGAAGCCGCCGTACCAATGATCCTGGAGTACCAGGCGAAGATAG
ACTGGAAAAGCAGTCGGGGGAGTGGTGTCCTGCGTTTAATCAACCAGAGA
ACGGAAGTGGCCACAGTCAAGCATCTAATCCGCTGTGGCGTCGATCCAGA
AGACGCCAACAAGAAAGGGGAGTGCGCGATCTGGGTCGCCGTGCGGATCA
ACAATGAGCCTGTTGCCCAGTATCTCGCGTCAGTTGTGAAGGTAAAACTG
AATTATGCCGTGGGACAAGGCGCAGTTTTGCATATTGCATGTCGTTATGA
CAGCCTGAACATGGTGCGCATCCTGGCCGAGGCTGGAGCGGACGTCAATC
TCGCGGCCCCGGGGGGTGGCGAGACTCCGTTGCAGGCGGCCTGCAACCGT
GAAGTCGACGGCTCCAAGTTGAACGACACTTTGGAGATTATCCGGTATTT
AATTCAGAAAGGGGCCCGCGTCAACGACAGTGGCGGGAACTTCCGGTCGG
CCTTGCACAAGGCGTGTCTGAGTAGCGCGCCGGAAGTCATAAAGCTTCTC
TTGGATGCAGGAGCTGATACTAACTGCAAGGACCCGGTTGGGAGGATTCC
TGCTCACCTCGTGTGTTATCGGGGACTGGAGCACTACCGGGCATTAAGCC
CGAGTAAGGATGCCTTGGTCGCTCGAGACTTGATGCATCGCACGGCATTG
CACTATGCCGTGATTAGTGGGGATGTGGACCTGGTGGAAGAGGTCCTGGA
GAGCCACAAACAGCATCCTGATTACCAGGACACGTATATGGAGTTGGTTG
ATAAGGATGGATGGACGCCGTTGCATTGGGCAGCAAGATGTGTCTCTCCC
TTGGATGATAATAGGAAAGATATGGTTCCTATGATTGAGTACATGGTGGA
GCAAGGCTACGATCTCGCCGCTAAAGGGAAAGCAAGGGAAACGGAGTGGA
CGCCACTAGAAGTCGCGATATATCACGACGCTGATGAGATAGTCAAAGAA
CTCATCGTGCCGGATAACCTCGAACTGAACCAGCTGCTACCTGGCGCCGA
ATTTGAGGGTCACTTCTGTGACGGTTGCTTTCTGCCTCTCGTCGGCTTCA
ACGTGTATTGCCAGGTATGTGATAGCTTCTGGCTCTGCTTCAAGTGTCAA
GCCTACAGGGAGCTATTTCATTCCCCGGAACATGAATTGAAGCAGTTCTG
TGGCGAGTACGGATGGCGTGCGAAGGAATGGGTGCCAAGGGAACGATATG
TTCGTCCCGAAAGCCCTATTTTGCTTTCGGATCCACCGGCGGTTGCTTTC
CCACCTAGAAGCTAA
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Coding sequence (CDS) from alignment at ch2:2090352..2093116-

>KJC3_002257-T1 ID=KJC3_002257-T1|Name=KJC3_002257-T1|organism=Aspergillus niger KJC3|type=CDS|length=2094bp|location=Sequence derived from alignment at ch2:2090352..2093116- (Aspergillus niger KJC3)
ATGAACATGTCCGAATTAAAGAGAGAACTCTGCAGACTCTGCAAAAGGGG
AACTAAAACACTCTTTGCTGCCGTCCGCGAAGGGCACAAGGAGTGCGTCC
AGATAATCCTGGAAGACCCTGGGATGTTCCCAGTGTTTGAGGCCACGAAG
GCCCTCGGATATGCCGTGCGATATAACCAGCTTGAAATTGCTTGGCTCGT
GCTTGAGGCTGGGGCCTACCCAAGCCCTGAATTGGATGGCGACACATGGG
ATACCTCACCCCTCCATCATGCAACTATCAAAAGCAACTTGGAGATGGTG
AAGCTCCTACTCGAGTTCAAAGCTGACGTTGACCAGTCGGACCTGGTCAC
CCGCATGATACCCCTGTCTACTGCTACAGCACTGGGCCACACCGAAATCG
TCCGCTGCTTGCTGGAATCCGAAGCTGATGTCAACCTGGAGAACAGGTAT
GGCGAGGCACCTCTCCATATTGCCACTCGGCTTGGGCACCTGGAAATTAC
CCAGCTCCTTCTCGCTCGAGGGGCTGACGTGGACAAACTTGTTGCAGGTA
AAAATCCTCTGTACTTCGCGTGCAAACGTGACCATGTCAACATGGTCCGG
GTCCTCTTGGCCAACACTCCGAAGCCAAACCTGAACCTGGGAAGTGGGCG
GGAGCAACCGTTGTCAATAGCAATCTACCACGGCTACACCGAGATCGTCG
CCCTGCTGTTGGAGGCCGGCGTGGATGTCAACCGCATGTGCGGGGAGATC
TATACCCCGCTCGAATGGGCCGTAAAGCATAACTGTGAAGCCGCCGTACC
AATGATCCTGGAGTACCAGGCGAAGATAGACTGGAAAAGCAGTCGGGGGA
GTGGTGTCCTGCGTTTAATCAACCAGAGAACGGAAGTGGCCACAGTCAAG
CATCTAATCCGCTGTGGCGTCGATCCAGAAGACGCCAACAAGAAAGGGGA
GTGCGCGATCTGGGTCGCCGTGCGGATCAACAATGAGCCTGTTGCCCAGT
ATCTCGCGTCAGTTGTGAAGGTAAAACTGAATTATGCCGTGGGACAAGGC
GCAGTTTTGCATATTGCATGTCGTTATGACAGCCTGAACATGGTGCGCAT
CCTGGCCGAGGCTGGAGCGGACGTCAATCTCGCGGCCCCGGGGGGTGGCG
AGACTCCGTTGCAGGCGGCCTGCAACCGTGAAGTCGACGGCTCCAAGTTG
AACGACACTTTGGAGATTATCCGGTATTTAATTCAGAAAGGGGCCCGCGT
CAACGACAGTGGCGGGAACTTCCGGTCGGCCTTGCACAAGGCGTGTCTGA
GTAGCGCGCCGGAAGTCATAAAGCTTCTCTTGGATGCAGGAGCTGATACT
AACTGCAAGGACCCGGTTGGGAGGATTCCTGCTCACCTCGTGTGTTATCG
GGGACTGGAGCACTACCGGGCATTAAGCCCGAGTAAGGATGCCTTGGTCG
CTCGAGACTTGATGCATCGCACGGCATTGCACTATGCCGTGATTAGTGGG
GATGTGGACCTGGTGGAAGAGGTCCTGGAGAGCCACAAACAGCATCCTGA
TTACCAGGACACGTATATGGAGTTGGTTGATAAGGATGGATGGACGCCGT
TGCATTGGGCAGCAAGATGTGTCTCTCCCTTGGATGATAATAGGAAAGAT
ATGGTTCCTATGATTGAGTACATGGTGGAGCAAGGCTACGATCTCGCCGC
TAAAGGGAAAGCAAGGGAAACGGAGTGGACGCCACTAGAAGTCGCGATAT
ATCACGACGCTGATGAGATAGTCAAAGAACTCATCGTGCCGGATAACCTC
GAACTGAACCAGCTGCTACCTGGCGCCGAATTTGAGGGTCACTTCTGTGA
CGGTTGCTTTCTGCCTCTCGTCGGCTTCAACGTGTATTGCCAGGTATGTG
ATAGCTTCTGGCTCTGCTTCAAGTGTCAAGCCTACAGGGAGCTATTTCAT
TCCCCGGAACATGAATTGAAGCAGTTCTGTGGCGAGTACGGATGGCGTGC
GAAGGAATGGGTGCCAAGGGAACGATATGTTCGTCCCGAAAGCCCTATTT
TGCTTTCGGATCCACCGGCGGTTGCTTTCCCACCTAGAAGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002257KJC3_002257Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002257-T1.cdsKJC3_002257-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002257-T1.exon2KJC3_002257-T1.exon2Aspergillus niger KJC3exon
KJC3_002257-T1.exon1KJC3_002257-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002257-T1.utr5p2KJC3_002257-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_002257-T1.utr5p1KJC3_002257-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002257-T1KJC3_002257-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000433
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2090352..2093116 -
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