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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2273607..2275186+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002326-T1 ID=KJC3_002326-T1|Name=KJC3_002326-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1580bp|location=Sequence derived from alignment at ch2:2273607..2275186+ (Aspergillus niger KJC3)
GTTATATAAGGCAGACGGGTCGTGGGGTGGCGCGTGGTTATGTGAGAAAA
AGTCTTGATTTGCTTCTCAGCTGAACTCTTTTTGTGAACTCTTGTGTGTT
CTTCTTGTGTCAACCATTGTGCCAGGGTTTATGTGGGGTATTGAATAAGT
TCCCTTTGATAACGATCCAGAATCTGAAGGAACTCTTTTTTATCTGCCCT
TAATTTTTTTTTTCTTATTTGCTTCCGGGTAGTGACGACATTAGCCCTTT
TTTTTTTTGCCCGCCGCTCCGTTCTCCGACTTGGTTCTTTCCACGCCCGT
CGGAGCTTTGCGTACCTGCGTGTTTGCTGCTCTCGGCTTTTTGCTGTTTG
CCTCCAGCTTTCCCTAGATTCGCCTCTTCAGGGGCAACTAGTATCGTCGC
TTTTCTCTCTCCTGTTTGGAAGACCCAATCTTGCTTCGTCTTTCAATTAT
ACTCGGCTTACTGCTATCATCATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGTTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGAAAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGCTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTTATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG
GTTCGTATTCTTACCGTCCTTCTTGAGTTTGTCGAGATTAACGTGTGATT
TCGGCGCAGGTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGA
GCAGGCTGTTCAGTCTGCCATCCGCATCGTGAAGGAGGGTCGCGTTCAGG
CTATCAAGCTCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATC
ACGCAGGCCGGTATCCCTGTTTGTGGTCACATCGGGCTTACGCCTCAACG
TCAACACGCTCTTGGAGGGTTCAGGGTTCAGGGCAAAACGACCGCCAGCG
CAGTGAGGCTGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTC
ATGATGGTTCTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACGAA
GAAGTTGCGTATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCG
GACAAGTCCTGGTTCAAATTGATATGATCGGGAACTACCCCCCGGGCCGG
TTCCTTCCCAAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTAT
CAAAGGAATTCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTT
CCGAAGAATACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAA
AAGGCCATTGAGCACTTCGGCAAGGACTAA back to topCoding sequence (CDS) from alignment at ch2:2273607..2275186+ >KJC3_002326-T1 ID=KJC3_002326-T1|Name=KJC3_002326-T1|organism=Aspergillus niger KJC3|type=CDS|length=2100bp|location=Sequence derived from alignment at ch2:2273607..2275186+ (Aspergillus niger KJC3)
ATGGCTTCAAGATTCTCGGCGCAATTGCTAGTGCCTTTGGCGCGGTCGTC
CGTTCGTTGTCGGGCTGCATCCACTCCCGTCTTCTCGGTTCTCGCCGGCC
GACATGCCATCGCCACTCCTTCACCAACAGAGCTTCAGAAGCGGTATAGC
TCTCATTCTCCGCTGGGGGCCGCCTCGGCCAATCCCCGAAAGAAGGTGAC
CATGCAGACGTTACGGAATCTTTACAAGAAAGGGGAGCCAATTACGATGC
TTACGGCGCATGACTTCCCCAGTGGCCATGTCGCGGAAATGGCGGGGATG
GACGTGGTCCTGGTCGGTGACAGCTTGGCCATGGTTGCCCTCGGCATGGA
GGATACAAGTGAGATCCTTATGGATGAGATGTTGTTGCATTGTCGGAGTG
TCGCGCGTGCTGTCAAGAGTGCATTCACGGTCGCAGATCTCCCCATGGGG
TCATATGAAGTTTCCCCCGAGCAGGCTGTTCAGTCTGCCATCCGCATCGT
GAAGGAGGGTCGCGTTCAGGCTATCAAGCTCGAGGGTGGTGCTGAGATGG
CTCCGTCCATCAAACGTATCACGCAGGCCGGTATCCCTGTTTGTGGTCAC
ATCGGGCTTACGCCTCAACGTCAACACGCTCTTGGAGGGTTCAGGGTTCA
GGGCAAAACGACCGCCAGCGCAGTGAGGCTGTTGAAAGATGCCTTGGCCG
TCCAGGAAGCTGGCGCATTCATGATGGTTCTGGAAGCCGTGCCTGCTGAG
ATTGCCGCCCTCATTACGAAGAAGTTGCGTATCCCCACGATTGGCATCGG
TGCTGGAAACGGATGCTCCGGACAAGTCCTGGTTCAAATTGATATGATCG
GGAACTACCCCCCGGGCCGGTTCCTTCCCAAATTCGTCAAGAAGTATGGC
GACGTCTGGGGAGAGGCTATCAAAGGAATTCAACAATACCGTGAAGAGGT
TAAGAGCCGGGCGTATCCTTCCGAAGAATACACCTACCCTATTGCGAAGG
AAGAATTGGCCGAGTTTGAAAAGGCCATTGAGCACTTCGGCAAGGACTAA
ATGGCTTCAAGATTCTCGGCGCAATTGCTAGTGCCTTTGGCGCGGTCGTC
CGTTCGTTGTCGGGCTGCATCCACTCCCGTCTTCTCGGTTCTCGCCGGCC
GACATGCCATCGCCACTCCTTCACCAACAGAGCTTCAGAAGCGGTATAGC
TCTCATTCTCCGCTGGGGGCCGCCTCGGCCAATCCCCGAAAGAAGGTGAC
CATGCAGACGTTACGGAATCTTTACAAGAAAGGGGAGCCAATTACGATGC
TTACGGCGCATGACTTCCCCAGTGGCCATGTCGCGGAAATGGCGGGGATG
GACGTGGTCCTGGTCGGTGACAGCTTGGCCATGGTTGCCCTCGGCATGGA
GGATACAAGTGAGATCCTTATGGATGAGATGTTGTTGCATTGTCGGAGTG
TCGCGCGTGCTGTCAAGAGTGCATTCACGGTCGCAGATCTCCCCATGGGG
TCATATGAAGTTTCCCCCGAGCAGGCTGTTCAGTCTGCCATCCGCATCGT
GAAGGAGGGTCGCGTTCAGGCTATCAAGCTCGAGGGTGGTGCTGAGATGG
CTCCGTCCATCAAACGTATCACGCAGGCCGGTATCCCTGTTTGTGGTCAC
ATCGGGCTTACGCCTCAACGTCAACACGCTCTTGGAGGGTTCAGGGTTCA
GGGCAAAACGACCGCCAGCGCAGTGAGGCTGTTGAAAGATGCCTTGGCCG
TCCAGGAAGCTGGCGCATTCATGATGGTTCTGGAAGCCGTGCCTGCTGAG
ATTGCCGCCCTCATTACGAAGAAGTTGCGTATCCCCACGATTGGCATCGG
TGCTGGAAACGGATGCTCCGGACAAGTCCTGGTTCAAATTGATATGATCG
GGAACTACCCCCCGGGCCGGTTCCTTCCCAAATTCGTCAAGAAGTATGGC
GACGTCTGGGGAGAGGCTATCAAAGGAATTCAACAATACCGTGAAGAGGT
TAAGAGCCGGGCGTATCCTTCCGAAGAATACACCTACCCTATTGCGAAGG
AAGAATTGGCCGAGTTTGAAAAGGCCATTGAGCACTTCGGCAAGGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015940 | pantothenate biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002326-T1.utr5p1 | KJC3_002326-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263FTE |
| DBxref | InterPro:IPR015813 |
| DBxref | InterPro:IPR003700 |
| DBxref | InterPro:IPR040442 |
| DBxref | PFAM:PF02548 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2273607..2275186 + |
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