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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3674951..3676919+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002822-T1 ID=KJC3_002822-T1|Name=KJC3_002822-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1969bp|location=Sequence derived from alignment at ch2:3674951..3676919+ (Aspergillus niger KJC3) GCTCGCGGTCTTGCACTGTCTGCTGAAGGAGGACACGACTCCATTCAGTA
TCTGGAAGCAATATGGCCATGGGCAATACCAAGCACCTTCAATTCTCGGG
AAATAGATGATGTGCCTGTCCATTGTTTCTCGGGTCGTGGTCGGAATTAA
CCGACAGACCGAGAAAGTATCTTAGAAGAATGAATGGAATGGGAATGGGA
ACATCCCACGCACGCCCCACCGAGGGGTCCCAGTTACTGCTGGCGGGGTA
AAACTGACCCCTCGTAAAGCATCAACAGCCACTCATCGTCGCGGCACCTC
CTCCATCGACTTCGACGATGGACTAGAGGCATGGATGTGACCCCCACCGG
AGGACCTCGGCCGTCTGGAAGCGCTCCCTATTTCTGTCGCGCTCGCCCTC
CTCTTCTCCCTTCAGTCTTTCCCTTCTCTCCTTCCATCTCTCCTCCTATC
TCCCTGTTCCTCCTGAACCACATCCTCTTACACAATGTCTCTCGGAAAGA
AGGTTACTCTCAACTCCGGTGCTCAGATCCCGTATGTATTTTCCGTCTAC
GCTTGCGCAATCGCCAATTGCTGACCCCCAATTAGCCAGCTGGGATTTGG
TACCTGGCAGTCTGCCCCCGGTCAGGTCGGTGATGCCGTCTACGAGGCCT
TGAAGGCCGGCTACCGCCACTTGGTAAGTCGCGCATTTCCTGGATTATTT
AGTCAGTCAGCAACCAGTCACTAACACGATCTAGGATCTGGCTACTATGT
AGGTCCCAGTTCACACATCGACTCGATCACACAAGCTAATCCCCGCAGCT
ACCAGAACCAGCGCGAGGTTGCTGAGGGCATCAAGAGAGCCTACAAGGAC
GTCCCCGGCCTCAAGCGTGAGGACATCTTCATCGTAAGCATATTCCATAC
ATACTACGCCTCAAGAGCATACTAACCCGAGCAGACCTCCAAGCTGTGGA
ACTCCCAGCACGACCCCGCCGTTGTTGAGAAGGCTCTGGATGAGTGCCTT
GCTGAGCTCGAGCTCGACTACCTCGATGTGCGTACCTTGTCAGCTGACAT
CCACCAACAATCCCTAACATCTTCCAGCTCTACCTCGTCCACTGGCCCGT
TTCCTTCACCACCGGCTCCGAGTTGTTCCCCCTCGTCAAGGACAGCTCCG
TTGAGGGCGGTGATGTCGTGATCAACGACAACATCTCCATCGTCGACACC
TGGAAGGCCATGACCCAGCTCCCCAAGAGCAAGGCCCGCACCGTCGGTGT
CTCCAACCACATGATCCCTCACGTAAGTCGCTTCATATACCACTAAATTG
ACACATGGCTAATCCCCCGCAGCTCGAGGCCATCATCAACGCCACCGGCG
TCGTCCCCGCCGTCAACCAGATCGAGCGCCACCCCGTTCTCCAGAGCAAC
GAGCTCATCGAATACTGCCAGAAGAAGGGCATCCACGTGACCGCCTACTC
TGTAAGACCCCTACCTCTACTCCCTTCATTAACATCGATACTAACATAAC
AAACAGGCCTTCGGCAACAACGGCTTCGGCGTCCCCCTCCTCGTCACCCG
CCCCGAAGTCAAGGAAGTCGCTGAGTCCGCCTCCAAGCGCCTCGGCACCA
CCGTCACCCCTGCCCAGGTCATCCTGGCCTGGTCCCAGGTCGGTGGCCAC
AGTGTCATCCCCAAGTCGGTGACGCCGTCCCGCATCCAGGAGAACTTCAA
GGAGGTGGAGCTCACTCCCGAGGAAATCGCCAAGGTGTCCGAGCTGGGCA
AGGACCGCAGACGCTACAACACTCCTTACGTTGCTAACACGCCTCGCTGG
GATATCGACATCTTCGGTGAGGAGGAGGAGAAGCCTGCTGGTCATAAGGT
GATTGTTTAAGTGCTGGTCGCTGGTTACACTCTCGCTTGTATGATGATGA
TGATTATGTGACGGGTTATATATATGTGTAGGAGATAGATAAATGTGAAA
ATAGATTTGGTCTCCAGTA back to topCoding sequence (CDS) from alignment at ch2:3674951..3676919+ >KJC3_002822-T1 ID=KJC3_002822-T1|Name=KJC3_002822-T1|organism=Aspergillus niger KJC3|type=CDS|length=8040bp|location=Sequence derived from alignment at ch2:3674951..3676919+ (Aspergillus niger KJC3) ATGTCTCTCGGAAAGAAGGTTACTCTCAACTCCGGTGCTCAGATCCCCCA GCTGGGATTTGGTACCTGGCAGTCTGCCCCCGGTCAGGTCGGTGATGCCG TCTACGAGGCCTTGAAGGCCGGCTACCGCCACTTGGATCTGGCTACTATC TACCAGAACCAGCGCGAGGTTGCTGAGGGCATCAAGAGAGCCTACAAGGA CGTCCCCGGCCTCAAGCGTGAGGACATCTTCATCACCTCCAAGCTGTGGA ACTCCCAGCACGACCCCGCCGTTGTTGAGAAGGCTCTGGATGAGTGCCTT GCTGAGCTCGAGCTCGACTACCTCGATCTCTACCTCGTCCACTGGCCCGT TTCCTTCACCACCGGCTCCGAGTTGTTCCCCCTCGTCAAGGACAGCTCCG TTGAGGGCGGTGATGTCGTGATCAACGACAACATCTCCATCGTCGACACC TGGAAGGCCATGACCCAGCTCCCCAAGAGCAAGGCCCGCACCGTCGGTGT CTCCAACCACATGATCCCTCACCTCGAGGCCATCATCAACGCCACCGGCG TCGTCCCCGCCGTCAACCAGATCGAGCGCCACCCCGTTCTCCAGAGCAAC GAGCTCATCGAATACTGCCAGAAGAAGGGCATCCACGTGACCGCCTACTC TGCCTTCGGCAACAACGGCTTCGGCGTCCCCCTCCTCGTCACCCGCCCCG AAGTCAAGGAAGTCGCTGAGTCCGCCTCCAAGCGCCTCGGCACCACCGTC ACCCCTGCCCAGGTCATCCTGGCCTGGTCCCAGGTCGGTGGCCACAGTGT CATCCCCAAGTCGGTGACGCCGTCCCGCATCCAGGAGAACTTCAAGGAGG TGGAGCTCACTCCCGAGGAAATCGCCAAGGTGTCCGAGCTGGGCAAGGAC CGCAGACGCTACAACACTCCTTACGTTGCTAACACGCCTCGCTGGGATAT CGACATCTTCGGTGAGGAGGAGGAGAAGCCTGCTGGTCATAAGGTGATTG TTTAAATGTCTCTCGGAAAGAAGGTTACTCTCAACTCCGGTGCTCAGATC CCCCAGCTGGGATTTGGTACCTGGCAGTCTGCCCCCGGTCAGGTCGGTGA TGCCGTCTACGAGGCCTTGAAGGCCGGCTACCGCCACTTGGATCTGGCTA CTATCTACCAGAACCAGCGCGAGGTTGCTGAGGGCATCAAGAGAGCCTAC AAGGACGTCCCCGGCCTCAAGCGTGAGGACATCTTCATCACCTCCAAGCT GTGGAACTCCCAGCACGACCCCGCCGTTGTTGAGAAGGCTCTGGATGAGT GCCTTGCTGAGCTCGAGCTCGACTACCTCGATCTCTACCTCGTCCACTGG CCCGTTTCCTTCACCACCGGCTCCGAGTTGTTCCCCCTCGTCAAGGACAG CTCCGTTGAGGGCGGTGATGTCGTGATCAACGACAACATCTCCATCGTCG ACACCTGGAAGGCCATGACCCAGCTCCCCAAGAGCAAGGCCCGCACCGTC GGTGTCTCCAACCACATGATCCCTCACCTCGAGGCCATCATCAACGCCAC CGGCGTCGTCCCCGCCGTCAACCAGATCGAGCGCCACCCCGTTCTCCAGA GCAACGAGCTCATCGAATACTGCCAGAAGAAGGGCATCCACGTGACCGCC TACTCTGCCTTCGGCAACAACGGCTTCGGCGTCCCCCTCCTCGTCACCCG CCCCGAAGTCAAGGAAGTCGCTGAGTCCGCCTCCAAGCGCCTCGGCACCA CCGTCACCCCTGCCCAGGTCATCCTGGCCTGGTCCCAGGTCGGTGGCCAC AGTGTCATCCCCAAGTCGGTGACGCCGTCCCGCATCCAGGAGAACTTCAA GGAGGTGGAGCTCACTCCCGAGGAAATCGCCAAGGTGTCCGAGCTGGGCA AGGACCGCAGACGCTACAACACTCCTTACGTTGCTAACACGCCTCGCTGG GATATCGACATCTTCGGTGAGGAGGAGGAGAAGCCTGCTGGTCATAAGGT GATTGTTTAAATGTCTCTCGGAAAGAAGGTTACTCTCAACTCCGGTGCTC AGATCCCCCAGCTGGGATTTGGTACCTGGCAGTCTGCCCCCGGTCAGGTC GGTGATGCCGTCTACGAGGCCTTGAAGGCCGGCTACCGCCACTTGGATCT GGCTACTATCTACCAGAACCAGCGCGAGGTTGCTGAGGGCATCAAGAGAG CCTACAAGGACGTCCCCGGCCTCAAGCGTGAGGACATCTTCATCACCTCC AAGCTGTGGAACTCCCAGCACGACCCCGCCGTTGTTGAGAAGGCTCTGGA TGAGTGCCTTGCTGAGCTCGAGCTCGACTACCTCGATCTCTACCTCGTCC ACTGGCCCGTTTCCTTCACCACCGGCTCCGAGTTGTTCCCCCTCGTCAAG GACAGCTCCGTTGAGGGCGGTGATGTCGTGATCAACGACAACATCTCCAT CGTCGACACCTGGAAGGCCATGACCCAGCTCCCCAAGAGCAAGGCCCGCA CCGTCGGTGTCTCCAACCACATGATCCCTCACCTCGAGGCCATCATCAAC GCCACCGGCGTCGTCCCCGCCGTCAACCAGATCGAGCGCCACCCCGTTCT CCAGAGCAACGAGCTCATCGAATACTGCCAGAAGAAGGGCATCCACGTGA CCGCCTACTCTGCCTTCGGCAACAACGGCTTCGGCGTCCCCCTCCTCGTC ACCCGCCCCGAAGTCAAGGAAGTCGCTGAGTCCGCCTCCAAGCGCCTCGG CACCACCGTCACCCCTGCCCAGGTCATCCTGGCCTGGTCCCAGGTCGGTG GCCACAGTGTCATCCCCAAGTCGGTGACGCCGTCCCGCATCCAGGAGAAC TTCAAGGAGGTGGAGCTCACTCCCGAGGAAATCGCCAAGGTGTCCGAGCT GGGCAAGGACCGCAGACGCTACAACACTCCTTACGTTGCTAACACGCCTC GCTGGGATATCGACATCTTCGGTGAGGAGGAGGAGAAGCCTGCTGGTCAT AAGGTGATTGTTTAAATGTCTCTCGGAAAGAAGGTTACTCTCAACTCCGG TGCTCAGATCCCCCAGCTGGGATTTGGTACCTGGCAGTCTGCCCCCGGTC AGGTCGGTGATGCCGTCTACGAGGCCTTGAAGGCCGGCTACCGCCACTTG GATCTGGCTACTATCTACCAGAACCAGCGCGAGGTTGCTGAGGGCATCAA GAGAGCCTACAAGGACGTCCCCGGCCTCAAGCGTGAGGACATCTTCATCA CCTCCAAGCTGTGGAACTCCCAGCACGACCCCGCCGTTGTTGAGAAGGCT CTGGATGAGTGCCTTGCTGAGCTCGAGCTCGACTACCTCGATCTCTACCT CGTCCACTGGCCCGTTTCCTTCACCACCGGCTCCGAGTTGTTCCCCCTCG TCAAGGACAGCTCCGTTGAGGGCGGTGATGTCGTGATCAACGACAACATC TCCATCGTCGACACCTGGAAGGCCATGACCCAGCTCCCCAAGAGCAAGGC CCGCACCGTCGGTGTCTCCAACCACATGATCCCTCACCTCGAGGCCATCA TCAACGCCACCGGCGTCGTCCCCGCCGTCAACCAGATCGAGCGCCACCCC GTTCTCCAGAGCAACGAGCTCATCGAATACTGCCAGAAGAAGGGCATCCA CGTGACCGCCTACTCTGCCTTCGGCAACAACGGCTTCGGCGTCCCCCTCC TCGTCACCCGCCCCGAAGTCAAGGAAGTCGCTGAGTCCGCCTCCAAGCGC CTCGGCACCACCGTCACCCCTGCCCAGGTCATCCTGGCCTGGTCCCAGGT CGGTGGCCACAGTGTCATCCCCAAGTCGGTGACGCCGTCCCGCATCCAGG AGAACTTCAAGGAGGTGGAGCTCACTCCCGAGGAAATCGCCAAGGTGTCC GAGCTGGGCAAGGACCGCAGACGCTACAACACTCCTTACGTTGCTAACAC GCCTCGCTGGGATATCGACATCTTCGGTGAGGAGGAGGAGAAGCCTGCTG GTCATAAGGTGATTGTTTAAATGTCTCTCGGAAAGAAGGTTACTCTCAAC TCCGGTGCTCAGATCCCCCAGCTGGGATTTGGTACCTGGCAGTCTGCCCC CGGTCAGGTCGGTGATGCCGTCTACGAGGCCTTGAAGGCCGGCTACCGCC ACTTGGATCTGGCTACTATCTACCAGAACCAGCGCGAGGTTGCTGAGGGC ATCAAGAGAGCCTACAAGGACGTCCCCGGCCTCAAGCGTGAGGACATCTT CATCACCTCCAAGCTGTGGAACTCCCAGCACGACCCCGCCGTTGTTGAGA AGGCTCTGGATGAGTGCCTTGCTGAGCTCGAGCTCGACTACCTCGATCTC TACCTCGTCCACTGGCCCGTTTCCTTCACCACCGGCTCCGAGTTGTTCCC CCTCGTCAAGGACAGCTCCGTTGAGGGCGGTGATGTCGTGATCAACGACA ACATCTCCATCGTCGACACCTGGAAGGCCATGACCCAGCTCCCCAAGAGC AAGGCCCGCACCGTCGGTGTCTCCAACCACATGATCCCTCACCTCGAGGC CATCATCAACGCCACCGGCGTCGTCCCCGCCGTCAACCAGATCGAGCGCC ACCCCGTTCTCCAGAGCAACGAGCTCATCGAATACTGCCAGAAGAAGGGC ATCCACGTGACCGCCTACTCTGCCTTCGGCAACAACGGCTTCGGCGTCCC CCTCCTCGTCACCCGCCCCGAAGTCAAGGAAGTCGCTGAGTCCGCCTCCA AGCGCCTCGGCACCACCGTCACCCCTGCCCAGGTCATCCTGGCCTGGTCC CAGGTCGGTGGCCACAGTGTCATCCCCAAGTCGGTGACGCCGTCCCGCAT CCAGGAGAACTTCAAGGAGGTGGAGCTCACTCCCGAGGAAATCGCCAAGG TGTCCGAGCTGGGCAAGGACCGCAGACGCTACAACACTCCTTACGTTGCT AACACGCCTCGCTGGGATATCGACATCTTCGGTGAGGAGGAGGAGAAGCC TGCTGGTCATAAGGTGATTGTTTAAATGTCTCTCGGAAAGAAGGTTACTC TCAACTCCGGTGCTCAGATCCCCCAGCTGGGATTTGGTACCTGGCAGTCT GCCCCCGGTCAGGTCGGTGATGCCGTCTACGAGGCCTTGAAGGCCGGCTA CCGCCACTTGGATCTGGCTACTATCTACCAGAACCAGCGCGAGGTTGCTG AGGGCATCAAGAGAGCCTACAAGGACGTCCCCGGCCTCAAGCGTGAGGAC ATCTTCATCACCTCCAAGCTGTGGAACTCCCAGCACGACCCCGCCGTTGT TGAGAAGGCTCTGGATGAGTGCCTTGCTGAGCTCGAGCTCGACTACCTCG ATCTCTACCTCGTCCACTGGCCCGTTTCCTTCACCACCGGCTCCGAGTTG TTCCCCCTCGTCAAGGACAGCTCCGTTGAGGGCGGTGATGTCGTGATCAA CGACAACATCTCCATCGTCGACACCTGGAAGGCCATGACCCAGCTCCCCA AGAGCAAGGCCCGCACCGTCGGTGTCTCCAACCACATGATCCCTCACCTC GAGGCCATCATCAACGCCACCGGCGTCGTCCCCGCCGTCAACCAGATCGA GCGCCACCCCGTTCTCCAGAGCAACGAGCTCATCGAATACTGCCAGAAGA AGGGCATCCACGTGACCGCCTACTCTGCCTTCGGCAACAACGGCTTCGGC GTCCCCCTCCTCGTCACCCGCCCCGAAGTCAAGGAAGTCGCTGAGTCCGC CTCCAAGCGCCTCGGCACCACCGTCACCCCTGCCCAGGTCATCCTGGCCT GGTCCCAGGTCGGTGGCCACAGTGTCATCCCCAAGTCGGTGACGCCGTCC CGCATCCAGGAGAACTTCAAGGAGGTGGAGCTCACTCCCGAGGAAATCGC CAAGGTGTCCGAGCTGGGCAAGGACCGCAGACGCTACAACACTCCTTACG TTGCTAACACGCCTCGCTGGGATATCGACATCTTCGGTGAGGAGGAGGAG AAGCCTGCTGGTCATAAGGTGATTGTTTAAATGTCTCTCGGAAAGAAGGT TACTCTCAACTCCGGTGCTCAGATCCCCCAGCTGGGATTTGGTACCTGGC AGTCTGCCCCCGGTCAGGTCGGTGATGCCGTCTACGAGGCCTTGAAGGCC GGCTACCGCCACTTGGATCTGGCTACTATCTACCAGAACCAGCGCGAGGT TGCTGAGGGCATCAAGAGAGCCTACAAGGACGTCCCCGGCCTCAAGCGTG AGGACATCTTCATCACCTCCAAGCTGTGGAACTCCCAGCACGACCCCGCC GTTGTTGAGAAGGCTCTGGATGAGTGCCTTGCTGAGCTCGAGCTCGACTA CCTCGATCTCTACCTCGTCCACTGGCCCGTTTCCTTCACCACCGGCTCCG AGTTGTTCCCCCTCGTCAAGGACAGCTCCGTTGAGGGCGGTGATGTCGTG ATCAACGACAACATCTCCATCGTCGACACCTGGAAGGCCATGACCCAGCT CCCCAAGAGCAAGGCCCGCACCGTCGGTGTCTCCAACCACATGATCCCTC ACCTCGAGGCCATCATCAACGCCACCGGCGTCGTCCCCGCCGTCAACCAG ATCGAGCGCCACCCCGTTCTCCAGAGCAACGAGCTCATCGAATACTGCCA GAAGAAGGGCATCCACGTGACCGCCTACTCTGCCTTCGGCAACAACGGCT TCGGCGTCCCCCTCCTCGTCACCCGCCCCGAAGTCAAGGAAGTCGCTGAG TCCGCCTCCAAGCGCCTCGGCACCACCGTCACCCCTGCCCAGGTCATCCT GGCCTGGTCCCAGGTCGGTGGCCACAGTGTCATCCCCAAGTCGGTGACGC CGTCCCGCATCCAGGAGAACTTCAAGGAGGTGGAGCTCACTCCCGAGGAA ATCGCCAAGGTGTCCGAGCTGGGCAAGGACCGCAGACGCTACAACACTCC TTACGTTGCTAACACGCCTCGCTGGGATATCGACATCTTCGGTGAGGAGG AGGAGAAGCCTGCTGGTCATAAGGTGATTGTTTAAATGTCTCTCGGAAAG AAGGTTACTCTCAACTCCGGTGCTCAGATCCCCCAGCTGGGATTTGGTAC CTGGCAGTCTGCCCCCGGTCAGGTCGGTGATGCCGTCTACGAGGCCTTGA AGGCCGGCTACCGCCACTTGGATCTGGCTACTATCTACCAGAACCAGCGC GAGGTTGCTGAGGGCATCAAGAGAGCCTACAAGGACGTCCCCGGCCTCAA GCGTGAGGACATCTTCATCACCTCCAAGCTGTGGAACTCCCAGCACGACC CCGCCGTTGTTGAGAAGGCTCTGGATGAGTGCCTTGCTGAGCTCGAGCTC GACTACCTCGATCTCTACCTCGTCCACTGGCCCGTTTCCTTCACCACCGG CTCCGAGTTGTTCCCCCTCGTCAAGGACAGCTCCGTTGAGGGCGGTGATG TCGTGATCAACGACAACATCTCCATCGTCGACACCTGGAAGGCCATGACC CAGCTCCCCAAGAGCAAGGCCCGCACCGTCGGTGTCTCCAACCACATGAT CCCTCACCTCGAGGCCATCATCAACGCCACCGGCGTCGTCCCCGCCGTCA ACCAGATCGAGCGCCACCCCGTTCTCCAGAGCAACGAGCTCATCGAATAC TGCCAGAAGAAGGGCATCCACGTGACCGCCTACTCTGCCTTCGGCAACAA CGGCTTCGGCGTCCCCCTCCTCGTCACCCGCCCCGAAGTCAAGGAAGTCG CTGAGTCCGCCTCCAAGCGCCTCGGCACCACCGTCACCCCTGCCCAGGTC ATCCTGGCCTGGTCCCAGGTCGGTGGCCACAGTGTCATCCCCAAGTCGGT GACGCCGTCCCGCATCCAGGAGAACTTCAAGGAGGTGGAGCTCACTCCCG AGGAAATCGCCAAGGTGTCCGAGCTGGGCAAGGACCGCAGACGCTACAAC ACTCCTTACGTTGCTAACACGCCTCGCTGGGATATCGACATCTTCGGTGA GGAGGAGGAGAAGCCTGCTGGTCATAAGGTGATTGTTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
Term | Definition |
GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_002822-T1.utr5p1 | KJC3_002822-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_002822-T1.utr3p1 | KJC3_002822-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036812 |
DBxref | InterPro:IPR023210 |
DBxref | InterPro:IPR020471 |
DBxref | PFAM:PF00248 |
Product | mitochondrial glycerol dehydrogenase Gld1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch2 | supercontig | ch2:3674951..3676919 + |
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