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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3800637..3802819+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002868-T1 ID=KJC3_002868-T1|Name=KJC3_002868-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2183bp|location=Sequence derived from alignment at ch2:3800637..3802819+ (Aspergillus niger KJC3)
CCTGTGGACATTGTGCTGGCACAAGACCCTTTTGACGGGCGCAACAAAGG
TTCTTGTCGCGTTAATCCTATCAAAATTCGCTCGACACCTGAACCTTCGG
TTTCATTCCCAGTCTAAACTGCCCATCATGTTCGGTACAAAGCCTGCGGG
CACATCAACCGGCCTGTCCATCAACACCGGTTCTGCCAATTCTCTATTGT
AAGGTTTTCTTTCCTGTTGAGTCTGTTAGTGGATTTATGGTGTCATCTTG
GTTTACGCTTGTACGACGTGTCTAAACTGCAATTGCTTCGTCTCATTCCT
TTTGTATTTCCGGCCCTCACTCAAGCCTCGAAGAGCTAACAAAGTTGCCT
TATCAGTGGCTCTGGAACCAATACGCAGACTAGCACTACTACAACACCGG
CGACCACTACTACCTCGGGCGGGCTTTTCGGTAACCTTGGAAATACTGCG
ACTCAGTCAAAGCCGGCCGGTGGCCTATTTGGAAACGCCGGCGGCGCTAC
ACAACAATCTCAGCCTACCGGTTCGAGTCTGTTTCCGGGATTAGGTGGCC
AGCAGTCGAATACTACTTCAACTGGTGGAGGTCTGTTTGGGAACTCTACT
GCGACGACTTCGCAGCCACAGTCAGGTGGTCTTTTCTCGGGAGCCACGAC
CACGACCAACACACAAAGCGGGAACACCGGTGGAGGACTGTTTGGCAACT
TGGGCGGTAACACCGCAAACCAGACGCAATCAAAGCCACTTTTCGGTGGA
CTTGGGGGTTCTACAACTACTGGCGGGGGCCTATTGTAAGTGATATTCCT
GCCCACAACAATAGTCAAGGCTCATGCCAACCATCACAGTGGAGGCGCCA
ACCAAACTAGCGCGCAGCAGCAGCAGCAACAAACACAGAAGCCTACTCTG
TCTTTATTCGGAAACCAGAATACCACAACGCAACCAACGACACAACCCAC
GGCAGCGGCCGGGACAACGGTCATCCCTGGGGTCAAAGTCGATATCAGCA
ACATTCTTCCCACAACGAAATACGAGAGCTGCGCAGATGAGATCAAATCG
GAGTTGGAAAAGTTTGATAACTTTGTCCTTAACCAAATCAAGATCTGCAA
TGAGGTTGCGAATATGATACCCACCATCGCCGGCCAGGGAGAGACGATTC
CCAATGACGTTGAGTTTGTCCAGGGAAAATTAGAGACAATGCAGCACGCA
CTCGAGAATGACGCAGGTGACATTGATCAGCTGCGTAATCTTGTGTCTCG
CGACGCGGCTGAGGCTCAAGTTGCATTCCGAGCGATTGATACCTTGAAGT
TGCCACTGCAGTATCAATCTACCGGTGGGGCTGGATGGTGGTCTCAAGAT
CAGAAGATGTCAGATGGACAAGCATTGAGATCTACGCGCAAGAACACTCT
AGCTCTCCCGGACGATGTTGAAAGCGACCCGTCCACTGCCACATCTGTGA
ACGGGGTACCCGTCAACTTGGTTGACTACTTCTCTCAGCGCTCTGACGAG
ATGGGAGAGGTCCTGGAACGCTACACACGAAATTTGAAAGAGATTGAAGA
CCACCTTCACGGAGTTGAGGCGACTTTGGAACGACAGATCCATGACTTTG
TGACATCTCGTAGTCGAGATGGAGCAGCCGCTGGAGCCCCCAAGTCCATT
GTCAGCGAGCTTGCCACCGTTCTAGGCGATGTTGAGGCTGGCATACTAGG
CGTGGCCAGCCGTCTCGGTGGAGTTACCGAGCAAGTGCAAGAGGTGGTTC
TGGGCCCGCCCTCTGTTTCATGAATGTCTGGAAGTCTGTGCATTGACATC
ACAACATCGTCTTCATGTAAATTACGGATGGATTTAGATTTGATGAAGCA
TCCCTAAATTCGCTACATATGAGGCGAAACTTGATACAAATTCGGCTTCT
TGCCAAATTCTCTGATCCGACTATTCGCTAGTGGCCACGACCCCTCGACC
ACCCTGCCTATGACCGCGCAGAACGGCGTCGCTGAACTGGATGTGAAGCA
TCTGGGAGATGACAAATGAGGATACCATCATAAGCTCAATAGAAAGCTAG
TTCAAATCGCATAGTTACTTAAGGCTCGAATGAGTCATGTTCAATAATAA
TACTACTACCAAAGCATGGCATGCATATATGGCAATTGTAATAAGCATCA
GAGTGACTCATGTCTGCGGTTGTTGGTAATCAT back to topCoding sequence (CDS) from alignment at ch2:3800637..3802819+ >KJC3_002868-T1 ID=KJC3_002868-T1|Name=KJC3_002868-T1|organism=Aspergillus niger KJC3|type=CDS|length=4302bp|location=Sequence derived from alignment at ch2:3800637..3802819+ (Aspergillus niger KJC3)
ATGTTCGGTACAAAGCCTGCGGGCACATCAACCGGCCTGTCCATCAACAC
CGGTTCTGCCAATTCTCTATTTGGCTCTGGAACCAATACGCAGACTAGCA
CTACTACAACACCGGCGACCACTACTACCTCGGGCGGGCTTTTCGGTAAC
CTTGGAAATACTGCGACTCAGTCAAAGCCGGCCGGTGGCCTATTTGGAAA
CGCCGGCGGCGCTACACAACAATCTCAGCCTACCGGTTCGAGTCTGTTTC
CGGGATTAGGTGGCCAGCAGTCGAATACTACTTCAACTGGTGGAGGTCTG
TTTGGGAACTCTACTGCGACGACTTCGCAGCCACAGTCAGGTGGTCTTTT
CTCGGGAGCCACGACCACGACCAACACACAAAGCGGGAACACCGGTGGAG
GACTGTTTGGCAACTTGGGCGGTAACACCGCAAACCAGACGCAATCAAAG
CCACTTTTCGGTGGACTTGGGGGTTCTACAACTACTGGCGGGGGCCTATT
TGGAGGCGCCAACCAAACTAGCGCGCAGCAGCAGCAGCAACAAACACAGA
AGCCTACTCTGTCTTTATTCGGAAACCAGAATACCACAACGCAACCAACG
ACACAACCCACGGCAGCGGCCGGGACAACGGTCATCCCTGGGGTCAAAGT
CGATATCAGCAACATTCTTCCCACAACGAAATACGAGAGCTGCGCAGATG
AGATCAAATCGGAGTTGGAAAAGTTTGATAACTTTGTCCTTAACCAAATC
AAGATCTGCAATGAGGTTGCGAATATGATACCCACCATCGCCGGCCAGGG
AGAGACGATTCCCAATGACGTTGAGTTTGTCCAGGGAAAATTAGAGACAA
TGCAGCACGCACTCGAGAATGACGCAGGTGACATTGATCAGCTGCGTAAT
CTTGTGTCTCGCGACGCGGCTGAGGCTCAAGTTGCATTCCGAGCGATTGA
TACCTTGAAGTTGCCACTGCAGTATCAATCTACCGGTGGGGCTGGATGGT
GGTCTCAAGATCAGAAGATGTCAGATGGACAAGCATTGAGATCTACGCGC
AAGAACACTCTAGCTCTCCCGGACGATGTTGAAAGCGACCCGTCCACTGC
CACATCTGTGAACGGGGTACCCGTCAACTTGGTTGACTACTTCTCTCAGC
GCTCTGACGAGATGGGAGAGGTCCTGGAACGCTACACACGAAATTTGAAA
GAGATTGAAGACCACCTTCACGGAGTTGAGGCGACTTTGGAACGACAGAT
CCATGACTTTGTGACATCTCGTAGTCGAGATGGAGCAGCCGCTGGAGCCC
CCAAGTCCATTGTCAGCGAGCTTGCCACCGTTCTAGGCGATGTTGAGGCT
GGCATACTAGGCGTGGCCAGCCGTCTCGGTGGAGTTACCGAGCAAGTGCA
AGAGGTGGTTCTGGGCCCGCCCTCTGTTTCATGAATGTTCGGTACAAAGC
CTGCGGGCACATCAACCGGCCTGTCCATCAACACCGGTTCTGCCAATTCT
CTATTTGGCTCTGGAACCAATACGCAGACTAGCACTACTACAACACCGGC
GACCACTACTACCTCGGGCGGGCTTTTCGGTAACCTTGGAAATACTGCGA
CTCAGTCAAAGCCGGCCGGTGGCCTATTTGGAAACGCCGGCGGCGCTACA
CAACAATCTCAGCCTACCGGTTCGAGTCTGTTTCCGGGATTAGGTGGCCA
GCAGTCGAATACTACTTCAACTGGTGGAGGTCTGTTTGGGAACTCTACTG
CGACGACTTCGCAGCCACAGTCAGGTGGTCTTTTCTCGGGAGCCACGACC
ACGACCAACACACAAAGCGGGAACACCGGTGGAGGACTGTTTGGCAACTT
GGGCGGTAACACCGCAAACCAGACGCAATCAAAGCCACTTTTCGGTGGAC
TTGGGGGTTCTACAACTACTGGCGGGGGCCTATTTGGAGGCGCCAACCAA
ACTAGCGCGCAGCAGCAGCAGCAACAAACACAGAAGCCTACTCTGTCTTT
ATTCGGAAACCAGAATACCACAACGCAACCAACGACACAACCCACGGCAG
CGGCCGGGACAACGGTCATCCCTGGGGTCAAAGTCGATATCAGCAACATT
CTTCCCACAACGAAATACGAGAGCTGCGCAGATGAGATCAAATCGGAGTT
GGAAAAGTTTGATAACTTTGTCCTTAACCAAATCAAGATCTGCAATGAGG
TTGCGAATATGATACCCACCATCGCCGGCCAGGGAGAGACGATTCCCAAT
GACGTTGAGTTTGTCCAGGGAAAATTAGAGACAATGCAGCACGCACTCGA
GAATGACGCAGGTGACATTGATCAGCTGCGTAATCTTGTGTCTCGCGACG
CGGCTGAGGCTCAAGTTGCATTCCGAGCGATTGATACCTTGAAGTTGCCA
CTGCAGTATCAATCTACCGGTGGGGCTGGATGGTGGTCTCAAGATCAGAA
GATGTCAGATGGACAAGCATTGAGATCTACGCGCAAGAACACTCTAGCTC
TCCCGGACGATGTTGAAAGCGACCCGTCCACTGCCACATCTGTGAACGGG
GTACCCGTCAACTTGGTTGACTACTTCTCTCAGCGCTCTGACGAGATGGG
AGAGGTCCTGGAACGCTACACACGAAATTTGAAAGAGATTGAAGACCACC
TTCACGGAGTTGAGGCGACTTTGGAACGACAGATCCATGACTTTGTGACA
TCTCGTAGTCGAGATGGAGCAGCCGCTGGAGCCCCCAAGTCCATTGTCAG
CGAGCTTGCCACCGTTCTAGGCGATGTTGAGGCTGGCATACTAGGCGTGG
CCAGCCGTCTCGGTGGAGTTACCGAGCAAGTGCAAGAGGTGGTTCTGGGC
CCGCCCTCTGTTTCATGAATGTTCGGTACAAAGCCTGCGGGCACATCAAC
CGGCCTGTCCATCAACACCGGTTCTGCCAATTCTCTATTTGGCTCTGGAA
CCAATACGCAGACTAGCACTACTACAACACCGGCGACCACTACTACCTCG
GGCGGGCTTTTCGGTAACCTTGGAAATACTGCGACTCAGTCAAAGCCGGC
CGGTGGCCTATTTGGAAACGCCGGCGGCGCTACACAACAATCTCAGCCTA
CCGGTTCGAGTCTGTTTCCGGGATTAGGTGGCCAGCAGTCGAATACTACT
TCAACTGGTGGAGGTCTGTTTGGGAACTCTACTGCGACGACTTCGCAGCC
ACAGTCAGGTGGTCTTTTCTCGGGAGCCACGACCACGACCAACACACAAA
GCGGGAACACCGGTGGAGGACTGTTTGGCAACTTGGGCGGTAACACCGCA
AACCAGACGCAATCAAAGCCACTTTTCGGTGGACTTGGGGGTTCTACAAC
TACTGGCGGGGGCCTATTTGGAGGCGCCAACCAAACTAGCGCGCAGCAGC
AGCAGCAACAAACACAGAAGCCTACTCTGTCTTTATTCGGAAACCAGAAT
ACCACAACGCAACCAACGACACAACCCACGGCAGCGGCCGGGACAACGGT
CATCCCTGGGGTCAAAGTCGATATCAGCAACATTCTTCCCACAACGAAAT
ACGAGAGCTGCGCAGATGAGATCAAATCGGAGTTGGAAAAGTTTGATAAC
TTTGTCCTTAACCAAATCAAGATCTGCAATGAGGTTGCGAATATGATACC
CACCATCGCCGGCCAGGGAGAGACGATTCCCAATGACGTTGAGTTTGTCC
AGGGAAAATTAGAGACAATGCAGCACGCACTCGAGAATGACGCAGGTGAC
ATTGATCAGCTGCGTAATCTTGTGTCTCGCGACGCGGCTGAGGCTCAAGT
TGCATTCCGAGCGATTGATACCTTGAAGTTGCCACTGCAGTATCAATCTA
CCGGTGGGGCTGGATGGTGGTCTCAAGATCAGAAGATGTCAGATGGACAA
GCATTGAGATCTACGCGCAAGAACACTCTAGCTCTCCCGGACGATGTTGA
AAGCGACCCGTCCACTGCCACATCTGTGAACGGGGTACCCGTCAACTTGG
TTGACTACTTCTCTCAGCGCTCTGACGAGATGGGAGAGGTCCTGGAACGC
TACACACGAAATTTGAAAGAGATTGAAGACCACCTTCACGGAGTTGAGGC
GACTTTGGAACGACAGATCCATGACTTTGTGACATCTCGTAGTCGAGATG
GAGCAGCCGCTGGAGCCCCCAAGTCCATTGTCAGCGAGCTTGCCACCGTT
CTAGGCGATGTTGAGGCTGGCATACTAGGCGTGGCCAGCCGTCTCGGTGG
AGTTACCGAGCAAGTGCAAGAGGTGGTTCTGGGCCCGCCCTCTGTTTCAT
GA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002868-T1.utr5p1 | KJC3_002868-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002868-T1.utr3p1 | KJC3_002868-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025574 |
| DBxref | PFAM:PF13634 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3800637..3802819 + |
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