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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3874427..3876074+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002900-T1 ID=KJC3_002900-T1|Name=KJC3_002900-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1648bp|location=Sequence derived from alignment at ch2:3874427..3876074+ (Aspergillus niger KJC3)
GCATATTCTCGCAAAGGATACTACACGACCTTTCCACCCTGTAAACGCCA
AAATTCATTCATCATGTCTCACGACCAGCGTTCGCCCTCCGAGGAGGTCT
CTAGGACCGCCCTGTCCAAACCTGCTTCGGAGTCGACTATCGTGGGCGAT
GGGCACCACCCACTGCCAGCCAAAGACACCAGTACGCGGGCATGGCTAGT
CGTGGTGGGCGGCTTACTGATCTACTTTCCGACTTTTGGTATGTCTTTAT
GACAGTGGATTCTACCTGTCACTTACACATTCTCTCACTGCAGGATTCCT
CAATGCTTTCGGTACCTTCCAAACGTTTTACGTACAGGATCTCCTTGCCG
GAACCTCCAGCTCCAAGATTGCTTGGATTGGCTCTTTGCAGGTGTGTGAA
TTGCCCCTGGATTTGACTTGAACCTAGCTGACCTGTTTAGATCTTCCTCC
TCTTCATTGGCGGTCTAGTGGTTGGCCCTCTGTATGACAAGGTGGGAGCT
ACCAAGCTCTTGGTGCCGGGGTCGGTCGTCTATGTCGTCGCCCTGATGCT
CACCAGTGTGTGCAAGAAGTACTACCAGCTCATCCTGGCTCAAGGAATCT
TGTTTGGCTGTGCCAATGCGCTGCTGTGAGTTCACATCATGCATATTCCG
ATGTCAGCTACTAATGATGGGCAGCTTCTATCCAACTATCGCAGCCATCA
ACCAATGGTTTGATCGGCGTCGAGGGATAGCACTCGGACTTGCTGTGTCG
GGGTCCTCACTGGGCGGAATCTTCTGGACAGAAATCATTCAGCTCATGCT
TGACCACATTGGATTCGGATGGACCGTCCGTGCCTGCGGGTTCATCAGTC
TGGCTTTCCTTGTTCCAAGCTGTGTGTTGATCATTACTCGGCCTCAAGAG
CCCGGGGAGAGCAAGGACATGCAGCTCGACTTCAAAGCCATTTTTACCGA
TACCAAGTATCTGCTCTTTAGCGTGGGAATGCTGCTCGTGCTCTGGGGAA
TGTTCATTCCCTTTTTCTACCTGCCATCTTACGGAGAGACGTACGGAATG
AGTGTGACGGGAGCAAACAATCTCCTCGCCTACATGAACGCAGGGTCCTT
CGTCGGACGAGTTCTAACGGGCCTGATGGCCGATCGCCTGGGACGGTTCG
TTTCCTTGCCTCATTATTCTTAATCGCGTTCACTAATTCTCTTTACAGAT
TCAACGTTATCTCACTGGCTGCACTAAGCTGTGGTATCCTGCTCTTTTGT
CTTCACAAAATCACCACATCCGGCGCCATCATTGCCTTCTCGACCCTGTA
CGGCATCTGCTCGGGCGGGTTGATCTCGCTACAATCGGCATGTATTGGCC
AGATCACCCCTGACCACAGTATTATTGGTGTCAAGATTGGGCTTATGATG
GGTTTCTGCTCGGTTGGGTATGTTCTTCCTTCGGTGAAATCTTTCCAGAC
ATAGAGAGAGCTTTGCTAACCAAATGGCTTCCTCTTGGCAGAGGCTTGAC
CGGTAGTCCAATCGCGGGCGCTCTTCTCAGCGCCGATCACCAGAAGTGGT
ATGGATTTATCGACTTTTGTGGTTCGATCCTCATGGGCGGAGCTGTGGTG
ACAATCCTCTCTCGATACGTGGCAGCTCCGCGGGAATGGAAGTTTTAG back to topCoding sequence (CDS) from alignment at ch2:3874427..3876074+ >KJC3_002900-T1 ID=KJC3_002900-T1|Name=KJC3_002900-T1|organism=Aspergillus niger KJC3|type=CDS|length=7830bp|location=Sequence derived from alignment at ch2:3874427..3876074+ (Aspergillus niger KJC3)
ATGTCTCACGACCAGCGTTCGCCCTCCGAGGAGGTCTCTAGGACCGCCCT
GTCCAAACCTGCTTCGGAGTCGACTATCGTGGGCGATGGGCACCACCCAC
TGCCAGCCAAAGACACCAGTACGCGGGCATGGCTAGTCGTGGTGGGCGGC
TTACTGATCTACTTTCCGACTTTTGGATTCCTCAATGCTTTCGGTACCTT
CCAAACGTTTTACGTACAGGATCTCCTTGCCGGAACCTCCAGCTCCAAGA
TTGCTTGGATTGGCTCTTTGCAGATCTTCCTCCTCTTCATTGGCGGTCTA
GTGGTTGGCCCTCTGTATGACAAGGTGGGAGCTACCAAGCTCTTGGTGCC
GGGGTCGGTCGTCTATGTCGTCGCCCTGATGCTCACCAGTGTGTGCAAGA
AGTACTACCAGCTCATCCTGGCTCAAGGAATCTTGTTTGGCTGTGCCAAT
GCGCTGCTCTTCTATCCAACTATCGCAGCCATCAACCAATGGTTTGATCG
GCGTCGAGGGATAGCACTCGGACTTGCTGTGTCGGGGTCCTCACTGGGCG
GAATCTTCTGGACAGAAATCATTCAGCTCATGCTTGACCACATTGGATTC
GGATGGACCGTCCGTGCCTGCGGGTTCATCAGTCTGGCTTTCCTTGTTCC
AAGCTGTGTGTTGATCATTACTCGGCCTCAAGAGCCCGGGGAGAGCAAGG
ACATGCAGCTCGACTTCAAAGCCATTTTTACCGATACCAAGTATCTGCTC
TTTAGCGTGGGAATGCTGCTCGTGCTCTGGGGAATGTTCATTCCCTTTTT
CTACCTGCCATCTTACGGAGAGACGTACGGAATGAGTGTGACGGGAGCAA
ACAATCTCCTCGCCTACATGAACGCAGGGTCCTTCGTCGGACGAGTTCTA
ACGGGCCTGATGGCCGATCGCCTGGGACGATTCAACGTTATCTCACTGGC
TGCACTAAGCTGTGGTATCCTGCTCTTTTGTCTTCACAAAATCACCACAT
CCGGCGCCATCATTGCCTTCTCGACCCTGTACGGCATCTGCTCGGGCGGG
TTGATCTCGCTACAATCGGCATGTATTGGCCAGATCACCCCTGACCACAG
TATTATTGGTGTCAAGATTGGGCTTATGATGGGTTTCTGCTCGGTTGGAG
GCTTGACCGGTAGTCCAATCGCGGGCGCTCTTCTCAGCGCCGATCACCAG
AAGTGGTATGGATTTATCGACTTTTGTGGTTCGATCCTCATGGGCGGAGC
TGTGGTGACAATCCTCTCTCGATACGTGGCAGCTCCGCGGGAATGGAAGT
TTTAGATGTCTCACGACCAGCGTTCGCCCTCCGAGGAGGTCTCTAGGACC
GCCCTGTCCAAACCTGCTTCGGAGTCGACTATCGTGGGCGATGGGCACCA
CCCACTGCCAGCCAAAGACACCAGTACGCGGGCATGGCTAGTCGTGGTGG
GCGGCTTACTGATCTACTTTCCGACTTTTGGATTCCTCAATGCTTTCGGT
ACCTTCCAAACGTTTTACGTACAGGATCTCCTTGCCGGAACCTCCAGCTC
CAAGATTGCTTGGATTGGCTCTTTGCAGATCTTCCTCCTCTTCATTGGCG
GTCTAGTGGTTGGCCCTCTGTATGACAAGGTGGGAGCTACCAAGCTCTTG
GTGCCGGGGTCGGTCGTCTATGTCGTCGCCCTGATGCTCACCAGTGTGTG
CAAGAAGTACTACCAGCTCATCCTGGCTCAAGGAATCTTGTTTGGCTGTG
CCAATGCGCTGCTCTTCTATCCAACTATCGCAGCCATCAACCAATGGTTT
GATCGGCGTCGAGGGATAGCACTCGGACTTGCTGTGTCGGGGTCCTCACT
GGGCGGAATCTTCTGGACAGAAATCATTCAGCTCATGCTTGACCACATTG
GATTCGGATGGACCGTCCGTGCCTGCGGGTTCATCAGTCTGGCTTTCCTT
GTTCCAAGCTGTGTGTTGATCATTACTCGGCCTCAAGAGCCCGGGGAGAG
CAAGGACATGCAGCTCGACTTCAAAGCCATTTTTACCGATACCAAGTATC
TGCTCTTTAGCGTGGGAATGCTGCTCGTGCTCTGGGGAATGTTCATTCCC
TTTTTCTACCTGCCATCTTACGGAGAGACGTACGGAATGAGTGTGACGGG
AGCAAACAATCTCCTCGCCTACATGAACGCAGGGTCCTTCGTCGGACGAG
TTCTAACGGGCCTGATGGCCGATCGCCTGGGACGATTCAACGTTATCTCA
CTGGCTGCACTAAGCTGTGGTATCCTGCTCTTTTGTCTTCACAAAATCAC
CACATCCGGCGCCATCATTGCCTTCTCGACCCTGTACGGCATCTGCTCGG
GCGGGTTGATCTCGCTACAATCGGCATGTATTGGCCAGATCACCCCTGAC
CACAGTATTATTGGTGTCAAGATTGGGCTTATGATGGGTTTCTGCTCGGT
TGGAGGCTTGACCGGTAGTCCAATCGCGGGCGCTCTTCTCAGCGCCGATC
ACCAGAAGTGGTATGGATTTATCGACTTTTGTGGTTCGATCCTCATGGGC
GGAGCTGTGGTGACAATCCTCTCTCGATACGTGGCAGCTCCGCGGGAATG
GAAGTTTTAGATGTCTCACGACCAGCGTTCGCCCTCCGAGGAGGTCTCTA
GGACCGCCCTGTCCAAACCTGCTTCGGAGTCGACTATCGTGGGCGATGGG
CACCACCCACTGCCAGCCAAAGACACCAGTACGCGGGCATGGCTAGTCGT
GGTGGGCGGCTTACTGATCTACTTTCCGACTTTTGGATTCCTCAATGCTT
TCGGTACCTTCCAAACGTTTTACGTACAGGATCTCCTTGCCGGAACCTCC
AGCTCCAAGATTGCTTGGATTGGCTCTTTGCAGATCTTCCTCCTCTTCAT
TGGCGGTCTAGTGGTTGGCCCTCTGTATGACAAGGTGGGAGCTACCAAGC
TCTTGGTGCCGGGGTCGGTCGTCTATGTCGTCGCCCTGATGCTCACCAGT
GTGTGCAAGAAGTACTACCAGCTCATCCTGGCTCAAGGAATCTTGTTTGG
CTGTGCCAATGCGCTGCTCTTCTATCCAACTATCGCAGCCATCAACCAAT
GGTTTGATCGGCGTCGAGGGATAGCACTCGGACTTGCTGTGTCGGGGTCC
TCACTGGGCGGAATCTTCTGGACAGAAATCATTCAGCTCATGCTTGACCA
CATTGGATTCGGATGGACCGTCCGTGCCTGCGGGTTCATCAGTCTGGCTT
TCCTTGTTCCAAGCTGTGTGTTGATCATTACTCGGCCTCAAGAGCCCGGG
GAGAGCAAGGACATGCAGCTCGACTTCAAAGCCATTTTTACCGATACCAA
GTATCTGCTCTTTAGCGTGGGAATGCTGCTCGTGCTCTGGGGAATGTTCA
TTCCCTTTTTCTACCTGCCATCTTACGGAGAGACGTACGGAATGAGTGTG
ACGGGAGCAAACAATCTCCTCGCCTACATGAACGCAGGGTCCTTCGTCGG
ACGAGTTCTAACGGGCCTGATGGCCGATCGCCTGGGACGATTCAACGTTA
TCTCACTGGCTGCACTAAGCTGTGGTATCCTGCTCTTTTGTCTTCACAAA
ATCACCACATCCGGCGCCATCATTGCCTTCTCGACCCTGTACGGCATCTG
CTCGGGCGGGTTGATCTCGCTACAATCGGCATGTATTGGCCAGATCACCC
CTGACCACAGTATTATTGGTGTCAAGATTGGGCTTATGATGGGTTTCTGC
TCGGTTGGAGGCTTGACCGGTAGTCCAATCGCGGGCGCTCTTCTCAGCGC
CGATCACCAGAAGTGGTATGGATTTATCGACTTTTGTGGTTCGATCCTCA
TGGGCGGAGCTGTGGTGACAATCCTCTCTCGATACGTGGCAGCTCCGCGG
GAATGGAAGTTTTAGATGTCTCACGACCAGCGTTCGCCCTCCGAGGAGGT
CTCTAGGACCGCCCTGTCCAAACCTGCTTCGGAGTCGACTATCGTGGGCG
ATGGGCACCACCCACTGCCAGCCAAAGACACCAGTACGCGGGCATGGCTA
GTCGTGGTGGGCGGCTTACTGATCTACTTTCCGACTTTTGGATTCCTCAA
TGCTTTCGGTACCTTCCAAACGTTTTACGTACAGGATCTCCTTGCCGGAA
CCTCCAGCTCCAAGATTGCTTGGATTGGCTCTTTGCAGATCTTCCTCCTC
TTCATTGGCGGTCTAGTGGTTGGCCCTCTGTATGACAAGGTGGGAGCTAC
CAAGCTCTTGGTGCCGGGGTCGGTCGTCTATGTCGTCGCCCTGATGCTCA
CCAGTGTGTGCAAGAAGTACTACCAGCTCATCCTGGCTCAAGGAATCTTG
TTTGGCTGTGCCAATGCGCTGCTCTTCTATCCAACTATCGCAGCCATCAA
CCAATGGTTTGATCGGCGTCGAGGGATAGCACTCGGACTTGCTGTGTCGG
GGTCCTCACTGGGCGGAATCTTCTGGACAGAAATCATTCAGCTCATGCTT
GACCACATTGGATTCGGATGGACCGTCCGTGCCTGCGGGTTCATCAGTCT
GGCTTTCCTTGTTCCAAGCTGTGTGTTGATCATTACTCGGCCTCAAGAGC
CCGGGGAGAGCAAGGACATGCAGCTCGACTTCAAAGCCATTTTTACCGAT
ACCAAGTATCTGCTCTTTAGCGTGGGAATGCTGCTCGTGCTCTGGGGAAT
GTTCATTCCCTTTTTCTACCTGCCATCTTACGGAGAGACGTACGGAATGA
GTGTGACGGGAGCAAACAATCTCCTCGCCTACATGAACGCAGGGTCCTTC
GTCGGACGAGTTCTAACGGGCCTGATGGCCGATCGCCTGGGACGATTCAA
CGTTATCTCACTGGCTGCACTAAGCTGTGGTATCCTGCTCTTTTGTCTTC
ACAAAATCACCACATCCGGCGCCATCATTGCCTTCTCGACCCTGTACGGC
ATCTGCTCGGGCGGGTTGATCTCGCTACAATCGGCATGTATTGGCCAGAT
CACCCCTGACCACAGTATTATTGGTGTCAAGATTGGGCTTATGATGGGTT
TCTGCTCGGTTGGAGGCTTGACCGGTAGTCCAATCGCGGGCGCTCTTCTC
AGCGCCGATCACCAGAAGTGGTATGGATTTATCGACTTTTGTGGTTCGAT
CCTCATGGGCGGAGCTGTGGTGACAATCCTCTCTCGATACGTGGCAGCTC
CGCGGGAATGGAAGTTTTAGATGTCTCACGACCAGCGTTCGCCCTCCGAG
GAGGTCTCTAGGACCGCCCTGTCCAAACCTGCTTCGGAGTCGACTATCGT
GGGCGATGGGCACCACCCACTGCCAGCCAAAGACACCAGTACGCGGGCAT
GGCTAGTCGTGGTGGGCGGCTTACTGATCTACTTTCCGACTTTTGGATTC
CTCAATGCTTTCGGTACCTTCCAAACGTTTTACGTACAGGATCTCCTTGC
CGGAACCTCCAGCTCCAAGATTGCTTGGATTGGCTCTTTGCAGATCTTCC
TCCTCTTCATTGGCGGTCTAGTGGTTGGCCCTCTGTATGACAAGGTGGGA
GCTACCAAGCTCTTGGTGCCGGGGTCGGTCGTCTATGTCGTCGCCCTGAT
GCTCACCAGTGTGTGCAAGAAGTACTACCAGCTCATCCTGGCTCAAGGAA
TCTTGTTTGGCTGTGCCAATGCGCTGCTCTTCTATCCAACTATCGCAGCC
ATCAACCAATGGTTTGATCGGCGTCGAGGGATAGCACTCGGACTTGCTGT
GTCGGGGTCCTCACTGGGCGGAATCTTCTGGACAGAAATCATTCAGCTCA
TGCTTGACCACATTGGATTCGGATGGACCGTCCGTGCCTGCGGGTTCATC
AGTCTGGCTTTCCTTGTTCCAAGCTGTGTGTTGATCATTACTCGGCCTCA
AGAGCCCGGGGAGAGCAAGGACATGCAGCTCGACTTCAAAGCCATTTTTA
CCGATACCAAGTATCTGCTCTTTAGCGTGGGAATGCTGCTCGTGCTCTGG
GGAATGTTCATTCCCTTTTTCTACCTGCCATCTTACGGAGAGACGTACGG
AATGAGTGTGACGGGAGCAAACAATCTCCTCGCCTACATGAACGCAGGGT
CCTTCGTCGGACGAGTTCTAACGGGCCTGATGGCCGATCGCCTGGGACGA
TTCAACGTTATCTCACTGGCTGCACTAAGCTGTGGTATCCTGCTCTTTTG
TCTTCACAAAATCACCACATCCGGCGCCATCATTGCCTTCTCGACCCTGT
ACGGCATCTGCTCGGGCGGGTTGATCTCGCTACAATCGGCATGTATTGGC
CAGATCACCCCTGACCACAGTATTATTGGTGTCAAGATTGGGCTTATGAT
GGGTTTCTGCTCGGTTGGAGGCTTGACCGGTAGTCCAATCGCGGGCGCTC
TTCTCAGCGCCGATCACCAGAAGTGGTATGGATTTATCGACTTTTGTGGT
TCGATCCTCATGGGCGGAGCTGTGGTGACAATCCTCTCTCGATACGTGGC
AGCTCCGCGGGAATGGAAGTTTTAGATGTCTCACGACCAGCGTTCGCCCT
CCGAGGAGGTCTCTAGGACCGCCCTGTCCAAACCTGCTTCGGAGTCGACT
ATCGTGGGCGATGGGCACCACCCACTGCCAGCCAAAGACACCAGTACGCG
GGCATGGCTAGTCGTGGTGGGCGGCTTACTGATCTACTTTCCGACTTTTG
GATTCCTCAATGCTTTCGGTACCTTCCAAACGTTTTACGTACAGGATCTC
CTTGCCGGAACCTCCAGCTCCAAGATTGCTTGGATTGGCTCTTTGCAGAT
CTTCCTCCTCTTCATTGGCGGTCTAGTGGTTGGCCCTCTGTATGACAAGG
TGGGAGCTACCAAGCTCTTGGTGCCGGGGTCGGTCGTCTATGTCGTCGCC
CTGATGCTCACCAGTGTGTGCAAGAAGTACTACCAGCTCATCCTGGCTCA
AGGAATCTTGTTTGGCTGTGCCAATGCGCTGCTCTTCTATCCAACTATCG
CAGCCATCAACCAATGGTTTGATCGGCGTCGAGGGATAGCACTCGGACTT
GCTGTGTCGGGGTCCTCACTGGGCGGAATCTTCTGGACAGAAATCATTCA
GCTCATGCTTGACCACATTGGATTCGGATGGACCGTCCGTGCCTGCGGGT
TCATCAGTCTGGCTTTCCTTGTTCCAAGCTGTGTGTTGATCATTACTCGG
CCTCAAGAGCCCGGGGAGAGCAAGGACATGCAGCTCGACTTCAAAGCCAT
TTTTACCGATACCAAGTATCTGCTCTTTAGCGTGGGAATGCTGCTCGTGC
TCTGGGGAATGTTCATTCCCTTTTTCTACCTGCCATCTTACGGAGAGACG
TACGGAATGAGTGTGACGGGAGCAAACAATCTCCTCGCCTACATGAACGC
AGGGTCCTTCGTCGGACGAGTTCTAACGGGCCTGATGGCCGATCGCCTGG
GACGATTCAACGTTATCTCACTGGCTGCACTAAGCTGTGGTATCCTGCTC
TTTTGTCTTCACAAAATCACCACATCCGGCGCCATCATTGCCTTCTCGAC
CCTGTACGGCATCTGCTCGGGCGGGTTGATCTCGCTACAATCGGCATGTA
TTGGCCAGATCACCCCTGACCACAGTATTATTGGTGTCAAGATTGGGCTT
ATGATGGGTTTCTGCTCGGTTGGAGGCTTGACCGGTAGTCCAATCGCGGG
CGCTCTTCTCAGCGCCGATCACCAGAAGTGGTATGGATTTATCGACTTTT
GTGGTTCGATCCTCATGGGCGGAGCTGTGGTGACAATCCTCTCTCGATAC
GTGGCAGCTCCGCGGGAATGGAAGTTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002900-T1.utr5p1 | KJC3_002900-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.17 |
| Note | antiSMASH:Cluster_2.18 |
| Note | SMCOG1137:Major facilitator superfamily MFS 1 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF12832 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3874427..3876074 + |
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