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KJC3_002935-T1, KJC3_002935-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002935-T1
Unique NameKJC3_002935-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3984194..3985403-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002935-T1 ID=KJC3_002935-T1|Name=KJC3_002935-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1210bp|location=Sequence derived from alignment at ch2:3984194..3985403- (Aspergillus niger KJC3)
ATGATTCTCTGGGGCGCATTGACCTGTGTCATGGCCGTTGTCAAGGACTT
CTCGCATCTGGTAGTCCTGAGAGTTATCATTGGGTGCATTGAATCTGGCT
TCGCCCCCGGAGTGTTACTAGTTTTGTCATCATGGTACAAGCAAACCGAG
CAGTCGAAAAGATTCGGCGTCTTCATCTCGGCAGCCGTTCTATCAGGTGC
CTTTGGTGGACTGATCGCTGCGGGCATTGTCGATAGCCTTGAAGGCGTAC
ATGGAATTCGAGGCTGGCGATGGCTTTTCATCATTGAAGGTGTTATCACC
GTTGGTTGTGCTCTCATATCTCTCTTTGTCCTGCCTGACTTTCCTGCTAC
AACACGACGTCTGTCCGATCGCGAGCGACAGATAGCTGTGGCCCGATTGG
CCCGGGAGAATGTCACAGCAACCACCGAAGATACCGAGCATCTGAGTAGC
CTGGGGGCTTGTAGAGTAGCTTGCCAAGACTTCCGCACCTGGGCCTTTGT
GGTTGGATATATGGTTCGTTGATCCTCTTGCCTGGCTTGATCTTCCAGAT
TACCTCCACGATAAACAAACTTCTCTTACTGAATCTGTCTCTTACCTTTA
GGTCATCGTTGGGTCAAGCACCTTAACCTACTTCTATCCTACCCTAGTCA
AAGGGCTCTTCGGCGACGCATCCACCGAGAAAGTCAACTTCCTGACCGTC
CCGATCTACGGCGTGGCCTTCGTCGCCACAGGTATCACGTCCTACTGCGG
TGACAAGTTCCCTACATGGCGTGGGTTAATCATTGCTGGCTGGTTGGCAT
TTTCCCTGATATGTTCGGTCATCGTCTGTGCCGTGTACAACTTCACCGCT
CGATATGTACTCCTGGTTCTTATGGCCGCTGGGCTTTGGTCCACCAATGG
CGGTACACTGGCGTATGCCTCCTCTGCCTTTGCTGGAATGCATCCGCAGG
CCAGGGGGGTTGCTTTGGCGATGGTAAATGCGCTGGGCAATTTAGCACAG
ATTTACGGATCGGTATGTATCTAACCCCGACGTTGGTGTTACCGAGTGCT
AGGACTAACGAAGAGTTGATAGTATCTTTTCCCTGACAAGGACAGCCCGA
AATACATCATGGGATTCTCTGTCATTTCTGCGATGTTGGCAGTGGGCGTG
GTTGTGTTTTTGGTCTTGCACATCTGGTTCCGTCGCCGTCTACGGTCGGG
GATTATCTAG
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Coding sequence (CDS) from alignment at ch2:3984194..3985403-

>KJC3_002935-T1 ID=KJC3_002935-T1|Name=KJC3_002935-T1|organism=Aspergillus niger KJC3|type=CDS|length=3186bp|location=Sequence derived from alignment at ch2:3984194..3985403- (Aspergillus niger KJC3)
TATCTTTTCCCTGACAAGGACAGCCCGAAATACATCATGGGATTCTCTGT
CATTTCTGCGATGTTGGCAGTGGGCGTGGTTGTGTTTTTGGTCTTGCACA
TCTGGTTCCGTCGCCGTCTACGGTCGGGGATTATCTAGGTCATCGTTGGG
TCAAGCACCTTAACCTACTTCTATCCTACCCTAGTCAAAGGGCTCTTCGG
CGACGCATCCACCGAGAAAGTCAACTTCCTGACCGTCCCGATCTACGGCG
TGGCCTTCGTCGCCACAGGTATCACGTCCTACTGCGGTGACAAGTTCCCT
ACATGGCGTGGGTTAATCATTGCTGGCTGGTTGGCATTTTCCCTGATATG
TTCGGTCATCGTCTGTGCCGTGTACAACTTCACCGCTCGATATGTACTCC
TGGTTCTTATGGCCGCTGGGCTTTGGTCCACCAATGGCGGTACACTGGCG
TATGCCTCCTCTGCCTTTGCTGGAATGCATCCGCAGGCCAGGGGGGTTGC
TTTGGCGATGGTAAATGCGCTGGGCAATTTAGCACAGATTTACGGATCGA
TGATTCTCTGGGGCGCATTGACCTGTGTCATGGCCGTTGTCAAGGACTTC
TCGCATCTGGTAGTCCTGAGAGTTATCATTGGGTGCATTGAATCTGGCTT
CGCCCCCGGAGTGTTACTAGTTTTGTCATCATGGTACAAGCAAACCGAGC
AGTCGAAAAGATTCGGCGTCTTCATCTCGGCAGCCGTTCTATCAGGTGCC
TTTGGTGGACTGATCGCTGCGGGCATTGTCGATAGCCTTGAAGGCGTACA
TGGAATTCGAGGCTGGCGATGGCTTTTCATCATTGAAGGTGTTATCACCG
TTGGTTGTGCTCTCATATCTCTCTTTGTCCTGCCTGACTTTCCTGCTACA
ACACGACGTCTGTCCGATCGCGAGCGACAGATAGCTGTGGCCCGATTGGC
CCGGGAGAATGTCACAGCAACCACCGAAGATACCGAGCATCTGAGTAGCC
TGGGGGCTTGTAGAGTAGCTTGCCAAGACTTCCGCACCTGGGCCTTTGTG
GTTGGATATATGTATCTTTTCCCTGACAAGGACAGCCCGAAATACATCAT
GGGATTCTCTGTCATTTCTGCGATGTTGGCAGTGGGCGTGGTTGTGTTTT
TGGTCTTGCACATCTGGTTCCGTCGCCGTCTACGGTCGGGGATTATCTAG
GTCATCGTTGGGTCAAGCACCTTAACCTACTTCTATCCTACCCTAGTCAA
AGGGCTCTTCGGCGACGCATCCACCGAGAAAGTCAACTTCCTGACCGTCC
CGATCTACGGCGTGGCCTTCGTCGCCACAGGTATCACGTCCTACTGCGGT
GACAAGTTCCCTACATGGCGTGGGTTAATCATTGCTGGCTGGTTGGCATT
TTCCCTGATATGTTCGGTCATCGTCTGTGCCGTGTACAACTTCACCGCTC
GATATGTACTCCTGGTTCTTATGGCCGCTGGGCTTTGGTCCACCAATGGC
GGTACACTGGCGTATGCCTCCTCTGCCTTTGCTGGAATGCATCCGCAGGC
CAGGGGGGTTGCTTTGGCGATGGTAAATGCGCTGGGCAATTTAGCACAGA
TTTACGGATCGATGATTCTCTGGGGCGCATTGACCTGTGTCATGGCCGTT
GTCAAGGACTTCTCGCATCTGGTAGTCCTGAGAGTTATCATTGGGTGCAT
TGAATCTGGCTTCGCCCCCGGAGTGTTACTAGTTTTGTCATCATGGTACA
AGCAAACCGAGCAGTCGAAAAGATTCGGCGTCTTCATCTCGGCAGCCGTT
CTATCAGGTGCCTTTGGTGGACTGATCGCTGCGGGCATTGTCGATAGCCT
TGAAGGCGTACATGGAATTCGAGGCTGGCGATGGCTTTTCATCATTGAAG
GTGTTATCACCGTTGGTTGTGCTCTCATATCTCTCTTTGTCCTGCCTGAC
TTTCCTGCTACAACACGACGTCTGTCCGATCGCGAGCGACAGATAGCTGT
GGCCCGATTGGCCCGGGAGAATGTCACAGCAACCACCGAAGATACCGAGC
ATCTGAGTAGCCTGGGGGCTTGTAGAGTAGCTTGCCAAGACTTCCGCACC
TGGGCCTTTGTGGTTGGATATATGTATCTTTTCCCTGACAAGGACAGCCC
GAAATACATCATGGGATTCTCTGTCATTTCTGCGATGTTGGCAGTGGGCG
TGGTTGTGTTTTTGGTCTTGCACATCTGGTTCCGTCGCCGTCTACGGTCG
GGGATTATCTAGGTCATCGTTGGGTCAAGCACCTTAACCTACTTCTATCC
TACCCTAGTCAAAGGGCTCTTCGGCGACGCATCCACCGAGAAAGTCAACT
TCCTGACCGTCCCGATCTACGGCGTGGCCTTCGTCGCCACAGGTATCACG
TCCTACTGCGGTGACAAGTTCCCTACATGGCGTGGGTTAATCATTGCTGG
CTGGTTGGCATTTTCCCTGATATGTTCGGTCATCGTCTGTGCCGTGTACA
ACTTCACCGCTCGATATGTACTCCTGGTTCTTATGGCCGCTGGGCTTTGG
TCCACCAATGGCGGTACACTGGCGTATGCCTCCTCTGCCTTTGCTGGAAT
GCATCCGCAGGCCAGGGGGGTTGCTTTGGCGATGGTAAATGCGCTGGGCA
ATTTAGCACAGATTTACGGATCGATGATTCTCTGGGGCGCATTGACCTGT
GTCATGGCCGTTGTCAAGGACTTCTCGCATCTGGTAGTCCTGAGAGTTAT
CATTGGGTGCATTGAATCTGGCTTCGCCCCCGGAGTGTTACTAGTTTTGT
CATCATGGTACAAGCAAACCGAGCAGTCGAAAAGATTCGGCGTCTTCATC
TCGGCAGCCGTTCTATCAGGTGCCTTTGGTGGACTGATCGCTGCGGGCAT
TGTCGATAGCCTTGAAGGCGTACATGGAATTCGAGGCTGGCGATGGCTTT
TCATCATTGAAGGTGTTATCACCGTTGGTTGTGCTCTCATATCTCTCTTT
GTCCTGCCTGACTTTCCTGCTACAACACGACGTCTGTCCGATCGCGAGCG
ACAGATAGCTGTGGCCCGATTGGCCCGGGAGAATGTCACAGCAACCACCG
AAGATACCGAGCATCTGAGTAGCCTGGGGGCTTGTAGAGTAGCTTGCCAA
GACTTCCGCACCTGGGCCTTTGTGGTTGGATATATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002935KJC3_002935Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002935-T1KJC3_002935-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002935-T1.cdsKJC3_002935-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002935-T1.exon3KJC3_002935-T1.exon3Aspergillus niger KJC3exon
KJC3_002935-T1.exon2KJC3_002935-T1.exon2Aspergillus niger KJC3exon
KJC3_002935-T1.exon1KJC3_002935-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3984194..3985403 -
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