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KJC3_002942-T1, KJC3_002942-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002942-T1
Unique NameKJC3_002942-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:4002483..4003183-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002942-T1 ID=KJC3_002942-T1|Name=KJC3_002942-T1|organism=Aspergillus niger KJC3|type=mRNA|length=701bp|location=Sequence derived from alignment at ch2:4002483..4003183- (Aspergillus niger KJC3)
ATGGCTGGAATTATCCTCCAGCTGCTTGCTCTTCTTTATGTTGCTATCTC
CCTAATCGTCACGTCCTCGTTGGGCTCAGATGCGCACTCGGAGGATGTCC
ACCGCACAGCAATCGCCGCGATCGCTTCTATTTACGTGACGGGCGTCTGG
TATGCCTTTGGCTGGAACTCGATTCAATATTTGATCCACGCAGAGATGCT
TCCCTCGTCAGTGCGAACGCTAGGCACAAGTATCCTGATGTGCATTCACT
ATGCCAATAGGTTTGCGCTTATTACCAAGGTATGAGCTTACTTCCCCTCT
TGTTACCAGTGTGAAACCGGTTGCTCATGAATCAGGCCGTTCCAACAATG
ACGTTGGCCGATGCACTCCAGTCTAAGGAAACATTTTGGTTCTTTTTCGT
GGTTGCGTTCTTGGGGTTCCTGTGAGGAATGTTTTTGTTGCCGGAAACAA
GCGAGATGATTAGGTGAAATTGCTACTGTGGTGATTTGTTTACAGCCCCG
ATAATTACTAGTTTTCCGAAGCCTGACTTACGTTTCTTCATGCGGCGACA
ATTGGCTGCCATTCGTTGACCCTCATGGCCTTACAGGTCACTGCGACGTT
GGCTCATCTAACTAGAAAGTTATGCATTCATTTGTTTGGAGGATTTCCAC
TCAGAGGCCGGACATAGTCTTTCCTTGATACACAAACAGAATCAATACCT
G
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Coding sequence (CDS) from alignment at ch2:4002483..4003183-

>KJC3_002942-T1 ID=KJC3_002942-T1|Name=KJC3_002942-T1|organism=Aspergillus niger KJC3|type=CDS|length=738bp|location=Sequence derived from alignment at ch2:4002483..4003183- (Aspergillus niger KJC3)
GCCGTTCCAACAATGACGTTGGCCGATGCACTCCAGTCTAAGGAAACATT
TTGGTTCTTTTTCGTGGTTGCGTTCTTGGGGTTCCTGTGAATGGCTGGAA
TTATCCTCCAGCTGCTTGCTCTTCTTTATGTTGCTATCTCCCTAATCGTC
ACGTCCTCGTTGGGCTCAGATGCGCACTCGGAGGATGTCCACCGCACAGC
AATCGCCGCGATCGCTTCTATTTACGTGACGGGCGTCTGGTATGCCTTTG
GCTGGAACTCGATTCAATATTTGATCCACGCAGAGATGCTTCCCTCGTCA
GTGCGAACGCTAGGCACAAGTATCCTGATGTGCATTCACTATGCCAATAG
GTTTGCGCTTATTACCAAGGCCGTTCCAACAATGACGTTGGCCGATGCAC
TCCAGTCTAAGGAAACATTTTGGTTCTTTTTCGTGGTTGCGTTCTTGGGG
TTCCTGTGAATGGCTGGAATTATCCTCCAGCTGCTTGCTCTTCTTTATGT
TGCTATCTCCCTAATCGTCACGTCCTCGTTGGGCTCAGATGCGCACTCGG
AGGATGTCCACCGCACAGCAATCGCCGCGATCGCTTCTATTTACGTGACG
GGCGTCTGGTATGCCTTTGGCTGGAACTCGATTCAATATTTGATCCACGC
AGAGATGCTTCCCTCGTCAGTGCGAACGCTAGGCACAAGTATCCTGATGT
GCATTCACTATGCCAATAGGTTTGCGCTTATTACCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002942KJC3_002942Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002942-T1KJC3_002942-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002942-T1.cdsKJC3_002942-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002942-T1.utr3p1KJC3_002942-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002942-T1.exon2KJC3_002942-T1.exon2Aspergillus niger KJC3exon
KJC3_002942-T1.exon1KJC3_002942-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-25)
DBxrefInterPro:IPR005828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:4002483..4003183 -
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