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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1190392..1191623- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003188-T1 ID=KJC3_003188-T1|Name=KJC3_003188-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1232bp|location=Sequence derived from alignment at ch3:1190392..1191623- (Aspergillus niger KJC3)
ATGTCCGCCGCCCTCTTCCTCGGCCTCCTAGGCCTCACAGCCCCCCTGGC
TGCCGCAACCGCGAGCACCCCAGGCCTCGAGCTTGCCTACTCCCTCGAGC
GCGCTACCCAAGGCATCAGTATTTCCTCCGATGGCCGCAAATTTCTGTCC
CAGCGGTACTCGACCACTCTGCCACCTCAGATTGTCGAGCTCCTGGACGA
CAACAACACCACGGTCCTCTACCCGAACACCGCCTGGAACTCCTACAACT
CCAGTGACCCTACCTCTGACCCACGCAAGACCTTCGTCAGCATTGACGGC
GCCCGCATGGGTCCCGACGGTCGCTACTGGATTGTCGACGGCGGCTCCAC
AGGAGTGAACGGCTCCACCAAGCTCGTTGGCGTGAACCTCACCACCGATG
CCGTTGACAAGCTTTACTACCTCGACGCCATGAAAGCTTCCGACAGCGGC
ATTGACGACGTCCGCTTTAATGCCGCTGGTGATGTTGCCTACATGAGTGA
CACTGCCGGTGCCCTCCTTGTTATGAACATGACCACCGGCACGGGTGTGC
GCGTGCTCTCCACCGACTCTTCCGCTCAACCCTGGTTCCCTATGATGTAC
AACGGTACCCTGGTCCCCGGGTACGGTGCCGCAGGCAGCACCCTCTCCGT
TGGACTCGATCAAATCGAGGTCTCTCCCAACGGTGTCTACCTGTACTACC
AACCTTGCAATGGAGGCCTGTATCGCATTAAGACAGCGTATGTTGATGCG
TCTCTCAAGAACGCGACTCTTGCGTCGACGCTGGGAGATTATGCGGAGCC
GTTCGCTCTGACGCCCAGCACCGGTGGTAGTACTATTGACGGGGATGGGA
ACATCTATGTTAGTGATACGAACTTGCTGGCTATCTGGAAGGTTACGCCT
GAGGGACGCGCGACATTACTTATCCAGGATGAGAAGCTGCTTTGGACGGA
TCTAATGTGGGTCACCGCTGATAAGAAGCTTTGGTTGCCTGCTTCGCAGA
TGAGGCCTGGTGGTGATGGATTGATGGCTGATGGGCCGAACTATATCTTC
ACCTACCCGATTGATGCGGGGCCGTCGCCTATTGATCATGCTTAAAGGTC
CTTGTGGCTGGTGGTTATGTATGAAGTGATGGCAGTGTATAGTACTATGT
TGACAGATTGGAAATGTATATTGTGTGGTCCTTCATCGACATGAGAAGTT
CTGACTCAGTTGATCATTAGATTGAATAAGTG back to topCoding sequence (CDS) from alignment at ch3:1190392..1191623- >KJC3_003188-T1 ID=KJC3_003188-T1|Name=KJC3_003188-T1|organism=Aspergillus niger KJC3|type=CDS|length=1095bp|location=Sequence derived from alignment at ch3:1190392..1191623- (Aspergillus niger KJC3)
ATGTCCGCCGCCCTCTTCCTCGGCCTCCTAGGCCTCACAGCCCCCCTGGC
TGCCGCAACCGCGAGCACCCCAGGCCTCGAGCTTGCCTACTCCCTCGAGC
GCGCTACCCAAGGCATCAGTATTTCCTCCGATGGCCGCAAATTTCTGTCC
CAGCGGTACTCGACCACTCTGCCACCTCAGATTGTCGAGCTCCTGGACGA
CAACAACACCACGGTCCTCTACCCGAACACCGCCTGGAACTCCTACAACT
CCAGTGACCCTACCTCTGACCCACGCAAGACCTTCGTCAGCATTGACGGC
GCCCGCATGGGTCCCGACGGTCGCTACTGGATTGTCGACGGCGGCTCCAC
AGGAGTGAACGGCTCCACCAAGCTCGTTGGCGTGAACCTCACCACCGATG
CCGTTGACAAGCTTTACTACCTCGACGCCATGAAAGCTTCCGACAGCGGC
ATTGACGACGTCCGCTTTAATGCCGCTGGTGATGTTGCCTACATGAGTGA
CACTGCCGGTGCCCTCCTTGTTATGAACATGACCACCGGCACGGGTGTGC
GCGTGCTCTCCACCGACTCTTCCGCTCAACCCTGGTTCCCTATGATGTAC
AACGGTACCCTGGTCCCCGGGTACGGTGCCGCAGGCAGCACCCTCTCCGT
TGGACTCGATCAAATCGAGGTCTCTCCCAACGGTGTCTACCTGTACTACC
AACCTTGCAATGGAGGCCTGTATCGCATTAAGACAGCGTATGTTGATGCG
TCTCTCAAGAACGCGACTCTTGCGTCGACGCTGGGAGATTATGCGGAGCC
GTTCGCTCTGACGCCCAGCACCGGTGGTAGTACTATTGACGGGGATGGGA
ACATCTATGTTAGTGATACGAACTTGCTGGCTATCTGGAAGGTTACGCCT
GAGGGACGCGCGACATTACTTATCCAGGATGAGAAGCTGCTTTGGACGGA
TCTAATGTGGGTCACCGCTGATAAGAAGCTTTGGTTGCCTGCTTCGCAGA
TGAGGCCTGGTGGTGATGGATTGATGGCTGATGGGCCGAACTATATCTTC
ACCTACCCGATTGATGCGGGGCCGTCGCCTATTGATCATGCTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003188-T1.utr3p1 | KJC3_003188-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR017996 |
| DBxref | InterPro:IPR011042 |
| DBxref | PFAM:PF03022 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1190392..1191623 - |
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