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KJC3_003580-T1, KJC3_003580-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003580-T1
Unique NameKJC3_003580-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2340536..2342827-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003580-T1 ID=KJC3_003580-T1|Name=KJC3_003580-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2292bp|location=Sequence derived from alignment at ch3:2340536..2342827- (Aspergillus niger KJC3)
CCTCGCCGTTTTTTCCGATTTTTACTGGTTGGGAGCCTTAGCAAATCGGC
TCGGACTTTTCCTTTTTTTGTTTGGGCTTCCACTTCCCTTCTTTCCTTCT
TTTCTTTCTCTTCTTCTTCTCCTCCTCTTTCCCTCTTCCACCCACTTTCC
AACTCATCCACCTTTCAGGTTTTTCTCATCACCATCTCATCAGCGTTGCA
ACGCTCTTGCGTATTGAAAGCTCTCTCCGCCAGGCTATTACTTTCGCCTG
CTGGTTTCCCACACGTTTTGTTCACGCTCAAACCACTCTGGTTAGTTCCC
TTCCCTTCCACCCCCTCCGGCCCTGCTGTCAGGCCTCCATCAGTATTACG
AAGCTGACCGGATCGTCTTGCTTTTCCTTTCCAACAGAAGAACCACGCGT
TGGTTTCTCTCTCTTCCTGCCGGAGAAAGCCACTGAAAAACAGAGTCGGT
CGAGAACTTGTCTATGTATTCGTCCTGCGTCAGAGATCTCGATCACCACC
TGCCGCTCAAGCTGCAATCGTTTCGCTTCACGTCGAAACCTTGTAGTATA
CATTCGAAGTCCTGTGGCTGAAAGCTAAGGGCTGCCGTATTCGCTGTGTC
CATCATTCGACTCAACTAAAAAAAATTCGATCTCAACAACCGCCATCATT
CCACCAAAATTAGGAATATTCCACGCATGTCTTGTTTTGTCAAGATATTC
CTGGTCCAGAATCCCTCCCGCTTCTTCTTCATATAACCATCTCGCTTAGT
CTCTTGAAGATTTCACCAATCAACAAACCGTCATCATGGCCACTGTCAAC
ATTCGTCGGGATGTCTCCGATCCCTTCTACCGTTACAAGATGGAGCGCCT
TCAGTCCAAGATTGAGGGCAAGGGCAACGGTATCAAGACCGTCGTCGTCA
ACCTGAACTCGGTCGCTCAGTCGCTCAGTCGGCCTCCGTCTTACGTGATC
AAGTACTTTGGCTTCGAGCTGGGTGCTCAGGCCAACGCCAAGCCCACCGA
TGATCGCTGGATCATCAACGGTGCCCATGATGCCCCCAAGCTTCAAGACT
ATCTGGACGGCTTTATTTCCAAGTTCGTGCTGTGCAAGAAATGTAAGAAT
CCGGAAACGGATGTCATCATCAAGGATGAGAAGATCTTTTTGGACTGCAA
GGCCTGTGGACAGCGCTCCGAGGTCGACTCCCGTCTGAAACTGAGCACCT
TCATCATCCGCAACGGCGCGCAAGGCAAGGGAGGGAAGAAGGACAAGGCC
TCGAAGAAGGCCCGTCGTGATCGAAACAAGGAGAAGAATGACACCGCGAA
TGGCGACAAGGATGGCAGCCCCGGAGATAGCAACAACTCCGAGAACGGTG
ATGAGGAGAACGGCGATGTCGCCCTGGAAGCAGGTAGCGATGACGAACTC
ACTCGCCGTATCAAGGCCGGTGCCAAGGACATCGAGGCTGATGAGATCGA
TGATGATGAATGGGCTGTTGACGTGTCGGAGGAGGCCGTCAAGGCTCGTG
CCAAGGAGCTCCCCGATGATCTCAAGCGCTCCCTCGTTCTCGAGGATGGT
GATGACGAGGGTGCTGACGGCCCCTCTGCCTACGACGAGCTTGGCAGCTG
GATCCTCAACGCCGCTTCTGAGAAGGGCGGTGTCACCGCTGTTAGTGACG
TCGATATCTACATGAAGGCCAAGGAATACGGCATCGAGAACAAGCACAAG
ACTGTCGCTGTTTTGGCTCAGACCATCTTCGATGAGAAGATCGCCAAGCA
GGTTCCTTCCCGTGCTGCTCTGCTGAAGAAGATGATCACCTCCGAACGCC
ACGAGAAGGCCTTCCTCGGTGGAACCGAGCGCTTTGTCGGCAAGGATCAC
CCTGAGCTCATTAGCCAGGTCCCCGCTGTCTTGCTCAAGTACTATGAGCA
CGACCTCGTCTCTGAGGAGACCCTCAAGGCGTGGGGTTCCAAGGCTAGCA
AGAAGTATGTCGACATCCAGACCAGCAAGAAGGTCCGCAAGGCTGCTGAA
CCCTTCCTCGAATGGCTTGAGAACGCCGAGAGTGAGGAGGAGAGCGAGGA
GGAGAGCGACTAGATCAGCGACTCGGCTTGTCGCAGTCATCTGTCTGCTC
AGTAGACAATTTTCGGGACTACTTGGTTTTTGTCGCGTGATTGTTTCGTT
TGTTCCAACTGATCTCCGCTCTTTTCGGATGTGACAGTTTCGCTCTGCCT
ATTGTTTGTTCCAGAAGTTTGAAATAAGCTCATCGAAAAAACATTAGTCT
TAGGTAGCTGCCAATAATATCGCTCTGCGTATTTGTGCTAGT
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Coding sequence (CDS) from alignment at ch3:2340536..2342827-

>KJC3_003580-T1 ID=KJC3_003580-T1|Name=KJC3_003580-T1|organism=Aspergillus niger KJC3|type=CDS|length=1278bp|location=Sequence derived from alignment at ch3:2340536..2342827- (Aspergillus niger KJC3)
ATGGCCACTGTCAACATTCGTCGGGATGTCTCCGATCCCTTCTACCGTTA
CAAGATGGAGCGCCTTCAGTCCAAGATTGAGGGCAAGGGCAACGGTATCA
AGACCGTCGTCGTCAACCTGAACTCGGTCGCTCAGTCGCTCAGTCGGCCT
CCGTCTTACGTGATCAAGTACTTTGGCTTCGAGCTGGGTGCTCAGGCCAA
CGCCAAGCCCACCGATGATCGCTGGATCATCAACGGTGCCCATGATGCCC
CCAAGCTTCAAGACTATCTGGACGGCTTTATTTCCAAGTTCGTGCTGTGC
AAGAAATGTAAGAATCCGGAAACGGATGTCATCATCAAGGATGAGAAGAT
CTTTTTGGACTGCAAGGCCTGTGGACAGCGCTCCGAGGTCGACTCCCGTC
TGAAACTGAGCACCTTCATCATCCGCAACGGCGCGCAAGGCAAGGGAGGG
AAGAAGGACAAGGCCTCGAAGAAGGCCCGTCGTGATCGAAACAAGGAGAA
GAATGACACCGCGAATGGCGACAAGGATGGCAGCCCCGGAGATAGCAACA
ACTCCGAGAACGGTGATGAGGAGAACGGCGATGTCGCCCTGGAAGCAGGT
AGCGATGACGAACTCACTCGCCGTATCAAGGCCGGTGCCAAGGACATCGA
GGCTGATGAGATCGATGATGATGAATGGGCTGTTGACGTGTCGGAGGAGG
CCGTCAAGGCTCGTGCCAAGGAGCTCCCCGATGATCTCAAGCGCTCCCTC
GTTCTCGAGGATGGTGATGACGAGGGTGCTGACGGCCCCTCTGCCTACGA
CGAGCTTGGCAGCTGGATCCTCAACGCCGCTTCTGAGAAGGGCGGTGTCA
CCGCTGTTAGTGACGTCGATATCTACATGAAGGCCAAGGAATACGGCATC
GAGAACAAGCACAAGACTGTCGCTGTTTTGGCTCAGACCATCTTCGATGA
GAAGATCGCCAAGCAGGTTCCTTCCCGTGCTGCTCTGCTGAAGAAGATGA
TCACCTCCGAACGCCACGAGAAGGCCTTCCTCGGTGGAACCGAGCGCTTT
GTCGGCAAGGATCACCCTGAGCTCATTAGCCAGGTCCCCGCTGTCTTGCT
CAAGTACTATGAGCACGACCTCGTCTCTGAGGAGACCCTCAAGGCGTGGG
GTTCCAAGGCTAGCAAGAAGTATGTCGACATCCAGACCAGCAAGAAGGTC
CGCAAGGCTGCTGAACCCTTCCTCGAATGGCTTGAGAACGCCGAGAGTGA
GGAGGAGAGCGAGGAGGAGAGCGACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003580KJC3_003580Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003580-T1KJC3_003580-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003580-T1.cdsKJC3_003580-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003580-T1.utr3p1KJC3_003580-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003580-T1.exon2KJC3_003580-T1.exon2Aspergillus niger KJC3exon
KJC3_003580-T1.exon1KJC3_003580-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003580-T1.utr5p2KJC3_003580-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003580-T1.utr5p1KJC3_003580-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262M7B
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR016189
DBxrefInterPro:IPR016190
DBxrefInterPro:IPR016021
DBxrefInterPro:IPR002735
DBxrefInterPro:IPR003307
DBxrefPFAM:PF02020
DBxrefPFAM:PF01873
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2340536..2342827 -
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