|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3024133..3025126+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003783-T1 ID=KJC3_003783-T1|Name=KJC3_003783-T1|organism=Aspergillus niger KJC3|type=mRNA|length=994bp|location=Sequence derived from alignment at ch3:3024133..3025126+ (Aspergillus niger KJC3)
CCAACTTTAGCCCCGGAAAACTTTGAGCTTCACCTCCCCCGTCTTTCCCG
TCACTCCGTCACTCCGTCAACACTTCCGCCTTTCCTGATCTCAACTTTAC
CGGCATCAGCAGCAAGGAAATCCCTTCTTCATTTCCGCAACATTCGCGTA
AGATTTAGCCGGCAATATGGTTCAGTTCTCCGAGGAAACCAAGGTTAGTC
TGCGGTGCTCTGTTGCCCGTCATACATAACTAGTCACGCTTGGTCTCGGT
ATGCTAACGGATATGCCTACTATCTAGGAGCGTATCTCCAAGGTCATTGA
CGTCTCCAGAGTTGCTATTCACTAGTTCGTCGCATCTTGATTCTTTCGAG
CAATGTGTCCTGACCAAAACTGACGGTTATGTTTGCATAAGTGGATACCT
GCCATTGATCGTCTATCTCGGTACGTGTGATGGAATTATTTTTCTTGATG
GAAATTTTCTTTGCTAACGGAAGCGGGACTAGGATACACTTACAGTGAAC
CCAAGCCTTCTCTGTTCAAGTATGAGCGACTGCGCCCTGCCGACGCTTCC
CGACGATTCCAGCTCACTAACGCTACATATAGGCTGTTCTCGCCGCTCGC
CTAGAGGAATGAGTTGCTTCAGCATACTGGACGGCGAATGTCCATCAGGC
AGACTCATGCAACGCCTGGATTCTCCGTCTGCGATGTAGACAGACAAATA
ATAATACTGCCTGTCGGAATACGAGCAGACTGAGAAACCTTTTTCATCTC
AAACCCCCGGGTCGATGTTGACATTGGAAGTCTACATCGATACACATGTA
CTTTTAAACTATGATCAGTTCTCATGTTTTGTATTGGTTAACGCGAATGG
TTCAATTTCATACACAGGTCCAGGGCAGGACCGAGGATACATGCAAAGGG
TTTCCGGGAGACTACATTATTAAGTATCAGCGTAAGCTCAACCGATGCAC
TGCGAAGCAGACTCCAGATCAAATATCAGCATGTATGATCTTAT back to topCoding sequence (CDS) from alignment at ch3:3024133..3025126+ >KJC3_003783-T1 ID=KJC3_003783-T1|Name=KJC3_003783-T1|organism=Aspergillus niger KJC3|type=CDS|length=810bp|location=Sequence derived from alignment at ch3:3024133..3025126+ (Aspergillus niger KJC3)
ATGGTTCAGTTCTCCGAGGAAACCAAGGAGCGTATCTCCAAGGTCATTGA
CGTCTCCAGAGTTGCTATTCACTATGGATACCTGCCATTGATCGTCTATC
TCGGATACACTTACAGTGAACCCAAGCCTTCTCTGTTCAAGCTGTTCTCG
CCGCTCGCCTAGATGGTTCAGTTCTCCGAGGAAACCAAGGAGCGTATCTC
CAAGGTCATTGACGTCTCCAGAGTTGCTATTCACTATGGATACCTGCCAT
TGATCGTCTATCTCGGATACACTTACAGTGAACCCAAGCCTTCTCTGTTC
AAGCTGTTCTCGCCGCTCGCCTAGATGGTTCAGTTCTCCGAGGAAACCAA
GGAGCGTATCTCCAAGGTCATTGACGTCTCCAGAGTTGCTATTCACTATG
GATACCTGCCATTGATCGTCTATCTCGGATACACTTACAGTGAACCCAAG
CCTTCTCTGTTCAAGCTGTTCTCGCCGCTCGCCTAGATGGTTCAGTTCTC
CGAGGAAACCAAGGAGCGTATCTCCAAGGTCATTGACGTCTCCAGAGTTG
CTATTCACTATGGATACCTGCCATTGATCGTCTATCTCGGATACACTTAC
AGTGAACCCAAGCCTTCTCTGTTCAAGCTGTTCTCGCCGCTCGCCTAGAT
GGTTCAGTTCTCCGAGGAAACCAAGGAGCGTATCTCCAAGGTCATTGACG
TCTCCAGAGTTGCTATTCACTATGGATACCTGCCATTGATCGTCTATCTC
GGATACACTTACAGTGAACCCAAGCCTTCTCTGTTCAAGCTGTTCTCGCC
GCTCGCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005742 | mitochondrial outer membrane translocase complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030150 | protein import into mitochondrial matrix |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003783-T1.utr5p1 | KJC3_003783-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003783-T1.utr3p1 | KJC3_003783-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012621 |
| DBxref | PFAM:PF08038 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3024133..3025126 + |
|
