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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3611658..3613752- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003987-T1 ID=KJC3_003987-T1|Name=KJC3_003987-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2095bp|location=Sequence derived from alignment at ch3:3611658..3613752- (Aspergillus niger KJC3)
GCGATGATTATATAGCCTCAAAATTTACGGAAATCTTCATTTTCTTGACA
GTTTCTACATATTTCTTACTGGAATCATCTCTGCAGCTTCAACTGCTCGC
TCGAGTTATATACCATTCATCATCATGATGAGAGATGCAGTAAGCTTGGA
TGTATGGCGTCTTGTACTTGAGCTGTGCACCACTCAGGATTTGTGCCAGC
TCTGCTTGGTCGACAAGGTCTTTAACTCCATTGCGACACCTCTTTTGTAT
CGATCTATCTCCCTGGTGGCTTATAAGGATCCTTCTGAACGCCGCCACTT
GTCAACATCTACAGAAGCGAAAACGGAACCGGAATTGCCGAGAGGTCCTT
GGCTTCTACTATCTCGACTGGAAGACGACGCAAATGACACCTTACGAGCC
TGGGTACAGGACATTAACGTTTCGAGTCCCTCCTTTGCTTGGGTAGACGC
GAAATTCCTAAAACGCCTCCAGATCAATGATTGCTTGGCTGCACTGGTTG
CCCGTCTGCCAAACCTTCGAAGGATCACCATAGGCTTTCCCAGTATTCAA
TCGACAACTTTGATTCGTACCATTTGTGAACATAGTAGGAAGCCAGAACT
TCTCCTACTGGATCAGAAAAGCGAGGATAAAATCTCCAGCCTGGCGGAGC
AGGTTTTACCCTGTGTCACGACTCTCTCTGCCTCTGTGGACCCAAGCTAT
GACCAGAACGGGCCAAATCGGCAGATTCTCACGTTGCAAAAGTTGTTTTT
CAAATGCCCACACCTACGGTCATTCTCGCTTTCTGTCGTAAAACAATATG
GTGGTTGTGCTATAAGGATGCCTCGGCATCCTGTCATATGGAGCTTTCAG
CTTACAGGCGAAGAAACTTTCCCGCCACTTGAGCATCTCTCCCTCGACGG
ATACTGGTTGGACGACAAGCAGTGGAAATATTGGCGTGATGGGCTTCAGT
GGGACAAGTTGGTATCACTCGCTGTAGGACCGCAGCGTTGCGCTGGCCTG
TTCCAAATGTTAGCCGGGCATGCTACGTCACTGAAAAGTCTTAATGTGTG
TAGCTGGCAAGGCGAGGGCAAGTATGAGCGAGAGGGACTTATCGAACTCC
TTTCGTCCTTTGATTCTCTGGAAACTCTGGTTTTGAAAGGGATCATGTGC
CCAGTTGAGGCAATTGCTCGTCATAGTAACCTATCTACTCTGTGCCTGCA
CGAAGAAGAATCTGCCTCCACGGCGCATCCGCGACAAGTCCTAACTGCGG
AGGAGCTCAGCCACCTCGATGTTAGCTGTCCCAAACTGAAGTCACTGCAG
GTGGGAGTCAAGAGAAAGAACGATCAATGGGTAAGCCAAAGAATCCTCTT
AGTACATCCCATGAACTGAACTATAACCACACAACAGCCCAACGACGTCT
TCGACAAACTAGCAACCGGTTTCCACAATCTCAGGAGCCTATCTATGCAC
TTTGAATTAGGTCTCCTCGACATACAAAACCCCATCAAGCCTGTTATAAA
CTATGCCTCCGTGAGAAGCATCGGCCAGCATTTCTTCGACCGTAGAAGGC
AGGCGGGCATTGAAGTATCCGACTCATTCATATTGACCGTCTGGACAGGC
AAATACTTCCGACGCTTCCCGCAGTGGCCACCAAGCTACGCCAGTTTCGA
GAAGAAATTTTCAGCGACTTACCAGATATGCTTGCCGAGTGATTCCTCCG
GTGAGGTCAGAGTCCGCCATTTGGAGAAAGAGCAATTGGACCTGCTCGAG
AAGAAGATCAACGTCCATCCGTACGAGAGAACACGTCTTGCTCAACAGGT
TGCCGCAGCCGTGGAAGGCCCAAAAATTGAGAATGACGAGGGACAAAGAA
ATCCATTTTCTGGTAAAGCTCATCGTAGAATCGGAGGTACTGCCTAGCAT
ATATTGTTATGAAGTATACTGGTTTGTGTTGGTCTTGAGTGTCGCAGTAC
TTTTGTCTTAATAATACATGTCATATCTGAATCGCTCGTTAGTATGCTTT
GTTTAACCTCTCCGCCTGTCGTGAAATACATATATTCGCATGAAGCATAA
ATACAAGAAAAATATCACTCCTGAATATATCATCTAATAACAGTC back to topCoding sequence (CDS) from alignment at ch3:3611658..3613752- >KJC3_003987-T1 ID=KJC3_003987-T1|Name=KJC3_003987-T1|organism=Aspergillus niger KJC3|type=CDS|length=3432bp|location=Sequence derived from alignment at ch3:3611658..3613752- (Aspergillus niger KJC3)
CCCAACGACGTCTTCGACAAACTAGCAACCGGTTTCCACAATCTCAGGAG
CCTATCTATGCACTTTGAATTAGGTCTCCTCGACATACAAAACCCCATCA
AGCCTGTTATAAACTATGCCTCCGTGAGAAGCATCGGCCAGCATTTCTTC
GACCGTAGAAGGCAGGCGGGCATTGAAGTATCCGACTCATTCATATTGAC
CGTCTGGACAGGCAAATACTTCCGACGCTTCCCGCAGTGGCCACCAAGCT
ACGCCAGTTTCGAGAAGAAATTTTCAGCGACTTACCAGATATGCTTGCCG
AGTGATTCCTCCGGTGAGGTCAGAGTCCGCCATTTGGAGAAAGAGCAATT
GGACCTGCTCGAGAAGAAGATCAACGTCCATCCGTACGAGAGAACACGTC
TTGCTCAACAGGTTGCCGCAGCCGTGGAAGGCCCAAAAATTGAGAATGAC
GAGGGACAAAGAAATCCATTTTCTGGTAAAGCTCATCGTAGAATCGGAGG
TACTGCCTAGATGATGAGAGATGCAGTAAGCTTGGATGTATGGCGTCTTG
TACTTGAGCTGTGCACCACTCAGGATTTGTGCCAGCTCTGCTTGGTCGAC
AAGGTCTTTAACTCCATTGCGACACCTCTTTTGTATCGATCTATCTCCCT
GGTGGCTTATAAGGATCCTTCTGAACGCCGCCACTTGTCAACATCTACAG
AAGCGAAAACGGAACCGGAATTGCCGAGAGGTCCTTGGCTTCTACTATCT
CGACTGGAAGACGACGCAAATGACACCTTACGAGCCTGGGTACAGGACAT
TAACGTTTCGAGTCCCTCCTTTGCTTGGGTAGACGCGAAATTCCTAAAAC
GCCTCCAGATCAATGATTGCTTGGCTGCACTGGTTGCCCGTCTGCCAAAC
CTTCGAAGGATCACCATAGGCTTTCCCAGTATTCAATCGACAACTTTGAT
TCGTACCATTTGTGAACATAGTAGGAAGCCAGAACTTCTCCTACTGGATC
AGAAAAGCGAGGATAAAATCTCCAGCCTGGCGGAGCAGGTTTTACCCTGT
GTCACGACTCTCTCTGCCTCTGTGGACCCAAGCTATGACCAGAACGGGCC
AAATCGGCAGATTCTCACGTTGCAAAAGTTGTTTTTCAAATGCCCACACC
TACGGTCATTCTCGCTTTCTGTCGTAAAACAATATGGTGGTTGTGCTATA
AGGATGCCTCGGCATCCTGTCATATGGAGCTTTCAGCTTACAGGCGAAGA
AACTTTCCCGCCACTTGAGCATCTCTCCCTCGACGGATACTGGTTGGACG
ACAAGCAGTGGAAATATTGGCGTGATGGGCTTCAGTGGGACAAGTTGGTA
TCACTCGCTGTAGGACCGCAGCGTTGCGCTGGCCTGTTCCAAATGTTAGC
CGGGCATGCTACGTCACTGAAAAGTCTTAATGTGTGTAGCTGGCAAGGCG
AGGGCAAGTATGAGCGAGAGGGACTTATCGAACTCCTTTCGTCCTTTGAT
TCTCTGGAAACTCTGGTTTTGAAAGGGATCATGTGCCCAGTTGAGGCAAT
TGCTCGTCATAGTAACCTATCTACTCTGTGCCTGCACGAAGAAGAATCTG
CCTCCACGGCGCATCCGCGACAAGTCCTAACTGCGGAGGAGCTCAGCCAC
CTCGATGTTAGCTGTCCCAAACTGAAGTCACTGCAGGTGGGAGTCAAGAG
AAAGAACGATCAATGGCCCAACGACGTCTTCGACAAACTAGCAACCGGTT
TCCACAATCTCAGGAGCCTATCTATGCACTTTGAATTAGGTCTCCTCGAC
ATACAAAACCCCATCAAGCCTGTTATAAACTATGCCTCCGTGAGAAGCAT
CGGCCAGCATTTCTTCGACCGTAGAAGGCAGGCGGGCATTGAAGTATCCG
ACTCATTCATATTGACCGTCTGGACAGGCAAATACTTCCGACGCTTCCCG
CAGTGGCCACCAAGCTACGCCAGTTTCGAGAAGAAATTTTCAGCGACTTA
CCAGATATGCTTGCCGAGTGATTCCTCCGGTGAGGTCAGAGTCCGCCATT
TGGAGAAAGAGCAATTGGACCTGCTCGAGAAGAAGATCAACGTCCATCCG
TACGAGAGAACACGTCTTGCTCAACAGGTTGCCGCAGCCGTGGAAGGCCC
AAAAATTGAGAATGACGAGGGACAAAGAAATCCATTTTCTGGTAAAGCTC
ATCGTAGAATCGGAGGTACTGCCTAGATGATGAGAGATGCAGTAAGCTTG
GATGTATGGCGTCTTGTACTTGAGCTGTGCACCACTCAGGATTTGTGCCA
GCTCTGCTTGGTCGACAAGGTCTTTAACTCCATTGCGACACCTCTTTTGT
ATCGATCTATCTCCCTGGTGGCTTATAAGGATCCTTCTGAACGCCGCCAC
TTGTCAACATCTACAGAAGCGAAAACGGAACCGGAATTGCCGAGAGGTCC
TTGGCTTCTACTATCTCGACTGGAAGACGACGCAAATGACACCTTACGAG
CCTGGGTACAGGACATTAACGTTTCGAGTCCCTCCTTTGCTTGGGTAGAC
GCGAAATTCCTAAAACGCCTCCAGATCAATGATTGCTTGGCTGCACTGGT
TGCCCGTCTGCCAAACCTTCGAAGGATCACCATAGGCTTTCCCAGTATTC
AATCGACAACTTTGATTCGTACCATTTGTGAACATAGTAGGAAGCCAGAA
CTTCTCCTACTGGATCAGAAAAGCGAGGATAAAATCTCCAGCCTGGCGGA
GCAGGTTTTACCCTGTGTCACGACTCTCTCTGCCTCTGTGGACCCAAGCT
ATGACCAGAACGGGCCAAATCGGCAGATTCTCACGTTGCAAAAGTTGTTT
TTCAAATGCCCACACCTACGGTCATTCTCGCTTTCTGTCGTAAAACAATA
TGGTGGTTGTGCTATAAGGATGCCTCGGCATCCTGTCATATGGAGCTTTC
AGCTTACAGGCGAAGAAACTTTCCCGCCACTTGAGCATCTCTCCCTCGAC
GGATACTGGTTGGACGACAAGCAGTGGAAATATTGGCGTGATGGGCTTCA
GTGGGACAAGTTGGTATCACTCGCTGTAGGACCGCAGCGTTGCGCTGGCC
TGTTCCAAATGTTAGCCGGGCATGCTACGTCACTGAAAAGTCTTAATGTG
TGTAGCTGGCAAGGCGAGGGCAAGTATGAGCGAGAGGGACTTATCGAACT
CCTTTCGTCCTTTGATTCTCTGGAAACTCTGGTTTTGAAAGGGATCATGT
GCCCAGTTGAGGCAATTGCTCGTCATAGTAACCTATCTACTCTGTGCCTG
CACGAAGAAGAATCTGCCTCCACGGCGCATCCGCGACAAGTCCTAACTGC
GGAGGAGCTCAGCCACCTCGATGTTAGCTGTCCCAAACTGAAGTCACTGC
AGGTGGGAGTCAAGAGAAAGAACGATCAATGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003987-T1.utr3p1 | KJC3_003987-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003987-T1.utr5p1 | KJC3_003987-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032675 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3611658..3613752 - |
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