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KJC3_004206-T1, KJC3_004206-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004206-T1
Unique NameKJC3_004206-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4215723..4217414-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004206-T1 ID=KJC3_004206-T1|Name=KJC3_004206-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1692bp|location=Sequence derived from alignment at ch3:4215723..4217414- (Aspergillus niger KJC3)
CAGTGACCAAACCTCCACCTCATTCACCTTAATCAAAGCACCTGTACTGT
GAGATAATGGGCGCTTCTCTCACTCCATACACTCAAACGTTATCGCGGAA
AAGCCATCGCAAGTCTCGTCTGGGATGTAAGAACTGTAAGAGGCGTAGAA
TTAAAGTCAGTTCCCGACGCCTTCTCCACTCTGGGCGCTTCAATGAGTGA
GAGATACTAACCGATCCCCAGTGCGATGAGATCAAGCCACACTGCACCAA
CTGCCTCCGCCATTCAATAGAGTGCGACTACAGCTTTAAGCCCCAAACTA
ACTCCAGCTCCTCTCCACAATCACAGCAATCAGACTCGGTATCACCACCC
TCACAGGGCCCCAGCACAGATAGCTACACCTTCTACACATCCTCATCCGT
CAACTTTCAACCCCCAAAACGAGGCCATGGCACACCTCTCACATCAGGAC
CAGACACAACCCAACCATCACCCCCATCAAACAACGACCTAGCCAAGCGC
CCCTTCCAATACACAGCCCTGGACATGCTCCTCTTTCACCACTTCTCCAC
TTCCCCTGAACTAACCGGCGCCCAACCAAAAGCCCGTCAGCAATTATCTC
AAATCGCTTTTTCCCACCACTACGTCATGCACATCCTCCTCGCCTTCTCC
GGCTTCCACCTCGTGCGACGATCAGACGATCAGCAATGGTCCCAATCCAT
GGGTTTCACAGAAGCAGAAATATACACTGAAGCCGAACGCCACTTTAACG
TTGCTATTCGAGATGTCTCAGCCACCTTACCGCACCTTGACCGCGACAAC
AGTCCCGCGATGTATGCCTCCGCAATATTCATCTTCATCTCAAGTCTCGC
CCGTGGCCCTCAACCGGGGGAGTACCTCGCGTTCCGGAGCGATGGCACCC
CAGGCCACTTGTCTTTGTTCCTCGGTGTGCGGTCTGTATTCGAGCTATGT
AGCGGAGATATGCCAACGAGCGTTTTCTCCATCCATGGAGAGGGCGATGA
TTCTTCTTCTCGCACCACACCTCAAACCGAACATGAAAACTCCCATATCG
CATCACAAAACAAAACCAAGTTAGAAGATTACCCGCACCACCTAGAAACT
TACCGCGCCCTCCTTACCACAACCATCCCCATCGACGACCCACGGCTCTC
AATCTATCTGCAAACACTAGACCGACTAGGCCACAGCCTCGACGCCATCA
TGGGTCCCGATCCGCAGGGTACAATGGGAATGGCTCTCTTCCCGCTTGTC
TTTGCGTGGTTGTATCAGTTGCCGGACGCAGTGGTGGGTGATTTGCAGCG
GAGGGAGCCGGTGGCGTTGATTCTGTTTGCGTTCTTTTTGTATCCGCTTG
ATCGGCTGGATCATGTTTGGTTTATTTGTGGGTGGCCGCGGCATATTCTC
GAGGGGATTCAGTGGCATTTGGATGGCAGGTATCGGGGGTATATTCAGTG
GGCAGTGGATCATGTTGGGGGTGGTAGATTATCAGAGGGTTTGGGGGTAG
GTATGGAGGTTGTTAGTAGATGAATGTCGTCTGTATACTTGTTGGGATAA
TATGTAATGGACATTAGCAAGATGAGGGTGTAAATAAACTACTTCCTTTA
TGATATCAGTCTATAGAGTACTAAGAAGAGTAGTACTCAATGTGGGTAAA
TATCACACACCCACCGCCCCCTCAACTACCGACCTCGCCAAC
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Coding sequence (CDS) from alignment at ch3:4215723..4217414-

>KJC3_004206-T1 ID=KJC3_004206-T1|Name=KJC3_004206-T1|organism=Aspergillus niger KJC3|type=CDS|length=2802bp|location=Sequence derived from alignment at ch3:4215723..4217414- (Aspergillus niger KJC3)
TGCGATGAGATCAAGCCACACTGCACCAACTGCCTCCGCCATTCAATAGA
GTGCGACTACAGCTTTAAGCCCCAAACTAACTCCAGCTCCTCTCCACAAT
CACAGCAATCAGACTCGGTATCACCACCCTCACAGGGCCCCAGCACAGAT
AGCTACACCTTCTACACATCCTCATCCGTCAACTTTCAACCCCCAAAACG
AGGCCATGGCACACCTCTCACATCAGGACCAGACACAACCCAACCATCAC
CCCCATCAAACAACGACCTAGCCAAGCGCCCCTTCCAATACACAGCCCTG
GACATGCTCCTCTTTCACCACTTCTCCACTTCCCCTGAACTAACCGGCGC
CCAACCAAAAGCCCGTCAGCAATTATCTCAAATCGCTTTTTCCCACCACT
ACGTCATGCACATCCTCCTCGCCTTCTCCGGCTTCCACCTCGTGCGACGA
TCAGACGATCAGCAATGGTCCCAATCCATGGGTTTCACAGAAGCAGAAAT
ATACACTGAAGCCGAACGCCACTTTAACGTTGCTATTCGAGATGTCTCAG
CCACCTTACCGCACCTTGACCGCGACAACAGTCCCGCGATGTATGCCTCC
GCAATATTCATCTTCATCTCAAGTCTCGCCCGTGGCCCTCAACCGGGGGA
GTACCTCGCGTTCCGGAGCGATGGCACCCCAGGCCACTTGTCTTTGTTCC
TCGGTGTGCGGTCTGTATTCGAGCTATGTAGCGGAGATATGCCAACGAGC
GTTTTCTCCATCCATGGAGAGGGCGATGATTCTTCTTCTCGCACCACACC
TCAAACCGAACATGAAAACTCCCATATCGCATCACAAAACAAAACCAAGT
TAGAAGATTACCCGCACCACCTAGAAACTTACCGCGCCCTCCTTACCACA
ACCATCCCCATCGACGACCCACGGCTCTCAATCTATCTGCAAACACTAGA
CCGACTAGGCCACAGCCTCGACGCCATCATGGGTCCCGATCCGCAGGGTA
CAATGGGAATGGCTCTCTTCCCGCTTGTCTTTGCGTGGTTGTATCAGTTG
CCGGACGCAGTGGTGGGTGATTTGCAGCGGAGGGAGCCGGTGGCGTTGAT
TCTGTTTGCGTTCTTTTTGTATCCGCTTGATCGGCTGGATCATGTTTGGT
TTATTTGTGGGTGGCCGCGGCATATTCTCGAGGGGATTCAGTGGCATTTG
GATGGCAGGTATCGGGGGTATATTCAGTGGGCAGTGGATCATGTTGGGGG
TGGTAGATTATCAGAGGGTTTGGGGGTAGGTATGGAGGTTGTTAGTAGAT
GAATGGGCGCTTCTCTCACTCCATACACTCAAACGTTATCGCGGAAAAGC
CATCGCAAGTCTCGTCTGGGATGTAAGAACTGTAAGAGGCGTAGAATTAA
ATGCGATGAGATCAAGCCACACTGCACCAACTGCCTCCGCCATTCAATAG
AGTGCGACTACAGCTTTAAGCCCCAAACTAACTCCAGCTCCTCTCCACAA
TCACAGCAATCAGACTCGGTATCACCACCCTCACAGGGCCCCAGCACAGA
TAGCTACACCTTCTACACATCCTCATCCGTCAACTTTCAACCCCCAAAAC
GAGGCCATGGCACACCTCTCACATCAGGACCAGACACAACCCAACCATCA
CCCCCATCAAACAACGACCTAGCCAAGCGCCCCTTCCAATACACAGCCCT
GGACATGCTCCTCTTTCACCACTTCTCCACTTCCCCTGAACTAACCGGCG
CCCAACCAAAAGCCCGTCAGCAATTATCTCAAATCGCTTTTTCCCACCAC
TACGTCATGCACATCCTCCTCGCCTTCTCCGGCTTCCACCTCGTGCGACG
ATCAGACGATCAGCAATGGTCCCAATCCATGGGTTTCACAGAAGCAGAAA
TATACACTGAAGCCGAACGCCACTTTAACGTTGCTATTCGAGATGTCTCA
GCCACCTTACCGCACCTTGACCGCGACAACAGTCCCGCGATGTATGCCTC
CGCAATATTCATCTTCATCTCAAGTCTCGCCCGTGGCCCTCAACCGGGGG
AGTACCTCGCGTTCCGGAGCGATGGCACCCCAGGCCACTTGTCTTTGTTC
CTCGGTGTGCGGTCTGTATTCGAGCTATGTAGCGGAGATATGCCAACGAG
CGTTTTCTCCATCCATGGAGAGGGCGATGATTCTTCTTCTCGCACCACAC
CTCAAACCGAACATGAAAACTCCCATATCGCATCACAAAACAAAACCAAG
TTAGAAGATTACCCGCACCACCTAGAAACTTACCGCGCCCTCCTTACCAC
AACCATCCCCATCGACGACCCACGGCTCTCAATCTATCTGCAAACACTAG
ACCGACTAGGCCACAGCCTCGACGCCATCATGGGTCCCGATCCGCAGGGT
ACAATGGGAATGGCTCTCTTCCCGCTTGTCTTTGCGTGGTTGTATCAGTT
GCCGGACGCAGTGGTGGGTGATTTGCAGCGGAGGGAGCCGGTGGCGTTGA
TTCTGTTTGCGTTCTTTTTGTATCCGCTTGATCGGCTGGATCATGTTTGG
TTTATTTGTGGGTGGCCGCGGCATATTCTCGAGGGGATTCAGTGGCATTT
GGATGGCAGGTATCGGGGGTATATTCAGTGGGCAGTGGATCATGTTGGGG
GTGGTAGATTATCAGAGGGTTTGGGGGTAGGTATGGAGGTTGTTAGTAGA
TGAATGGGCGCTTCTCTCACTCCATACACTCAAACGTTATCGCGGAAAAG
CCATCGCAAGTCTCGTCTGGGATGTAAGAACTGTAAGAGGCGTAGAATTA
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004206KJC3_004206Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004206-T1KJC3_004206-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004206-T1.cdsKJC3_004206-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004206-T1.utr3p1KJC3_004206-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004206-T1.exon2KJC3_004206-T1.exon2Aspergillus niger KJC3exon
KJC3_004206-T1.exon1KJC3_004206-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004206-T1.utr5p1KJC3_004206-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_3.8
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4215723..4217414 -
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