You are here

Home

KJC3_004242-T1, KJC3_004242-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004242-T1
Unique NameKJC3_004242-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4312459..4313334-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004242-T1 ID=KJC3_004242-T1|Name=KJC3_004242-T1|organism=Aspergillus niger KJC3|type=mRNA|length=876bp|location=Sequence derived from alignment at ch3:4312459..4313334- (Aspergillus niger KJC3)
ATGCAGCACTGCTCAAAACCCTGTTCAGCATGCAGCTGGTCCACTGAACG
ACAGGAGGGTTGCCGCTACGAAAGTAACGTTAAGATCATCCATGCGACGA
GCGACAGAGGCGTATGGTCCTTGGGTTCAGATCTGATTCTGAAGGAACGT
TCTAATCAAGCACCCAACTTTGAAGCCGAAAATCTGCGTTTCTTGAGGGA
AAATACCTCGATCCCAGTGCCCGGCGTGGTTGAAGATTGGGAGGAGCCTA
ATGGGCACTACTTCGTGTTGACGAAGCGGATTCCCGGCGTCCCCCTCAGC
AGCCTCTGGCCGCGCATGAAAATGGATGAAAAGGAACGTGTAGCCAAACA
AACTGCTGACTATCTAATGCAGCTTCGCGAGTTGCATTCCAACAGGATGG
AGTCCCTTGGGGGTAAGCCAATATATTCTACTTTTCTCTTCCGAAGGGGT
TATTATATTCCACACGGCCCTTTGGCGTCTGACGACGACCTTTGGGCCGA
GTTGGAGGTGGCTCTTGAACATGTCCCTGTTGAGACTCGTCAGCGACTTC
GGCAACGCATGCCGTCTGCAGCGCCGTATACATTTACGCATGGAAATCTC
ACTTCTGCCAATATCATGGTCGAGAATGGTAGTCTTACTGGCATACTTGA
CTGGGAGGCTTCGGGGTATTTTCCGGTCTGGTGGGAATTTACCTGTGCTG
GGATTGGTCTGGGGGAAGAGGACAGAGATTGGAGAGACCTGTTGCAAGAG
TACATGCCTGATTTATCTGAGGCTCGCGAATGGTGGTTGGATTATTGGTC
TTTGACAAGGTACCCCAACCGGAATGAGAGGGCAACGGCTCTTCTCGAGC
ACAAGGAGAGTATCAATTCTGCGTAG
back to top

Coding sequence (CDS) from alignment at ch3:4312459..4313334-

>KJC3_004242-T1 ID=KJC3_004242-T1|Name=KJC3_004242-T1|organism=Aspergillus niger KJC3|type=CDS|length=876bp|location=Sequence derived from alignment at ch3:4312459..4313334- (Aspergillus niger KJC3)
ATGCAGCACTGCTCAAAACCCTGTTCAGCATGCAGCTGGTCCACTGAACG
ACAGGAGGGTTGCCGCTACGAAAGTAACGTTAAGATCATCCATGCGACGA
GCGACAGAGGCGTATGGTCCTTGGGTTCAGATCTGATTCTGAAGGAACGT
TCTAATCAAGCACCCAACTTTGAAGCCGAAAATCTGCGTTTCTTGAGGGA
AAATACCTCGATCCCAGTGCCCGGCGTGGTTGAAGATTGGGAGGAGCCTA
ATGGGCACTACTTCGTGTTGACGAAGCGGATTCCCGGCGTCCCCCTCAGC
AGCCTCTGGCCGCGCATGAAAATGGATGAAAAGGAACGTGTAGCCAAACA
AACTGCTGACTATCTAATGCAGCTTCGCGAGTTGCATTCCAACAGGATGG
AGTCCCTTGGGGGTAAGCCAATATATTCTACTTTTCTCTTCCGAAGGGGT
TATTATATTCCACACGGCCCTTTGGCGTCTGACGACGACCTTTGGGCCGA
GTTGGAGGTGGCTCTTGAACATGTCCCTGTTGAGACTCGTCAGCGACTTC
GGCAACGCATGCCGTCTGCAGCGCCGTATACATTTACGCATGGAAATCTC
ACTTCTGCCAATATCATGGTCGAGAATGGTAGTCTTACTGGCATACTTGA
CTGGGAGGCTTCGGGGTATTTTCCGGTCTGGTGGGAATTTACCTGTGCTG
GGATTGGTCTGGGGGAAGAGGACAGAGATTGGAGAGACCTGTTGCAAGAG
TACATGCCTGATTTATCTGAGGCTCGCGAATGGTGGTTGGATTATTGGTC
TTTGACAAGGTACCCCAACCGGAATGAGAGGGCAACGGCTCTTCTCGAGC
ACAAGGAGAGTATCAATTCTGCGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004242KJC3_004242Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004242-T1.cdsKJC3_004242-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004242-T1.exon1KJC3_004242-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004242-T1KJC3_004242-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR002575
DBxrefPFAM:PF01636
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4312459..4313334 -
Powered by Drupal