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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4499154..4501579- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004310-T1 ID=KJC3_004310-T1|Name=KJC3_004310-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2426bp|location=Sequence derived from alignment at ch3:4499154..4501579- (Aspergillus niger KJC3) CTTCGTATCCGGTCCTCCTCTGCTGTTTGCGCGACCGTTGTCTCCCTCTC
AACATGGCAAGCCAAACCTCCGCTGACGCCGCGGCTCCTGTCGAGGCCCC
TGCCCCCCAGACCCTTCCTGATCGCTCCCAGAACCCCGCCGAAGCCGATG
CCCCCCAGGGAGAGGTCTCCAAGAACGCCGCAAAGAAGGCTGCTAAGCTG
GCCAAGCAGGCCGCCGACAAGGCTGAGAAGGCCGCGAACAAGGGGATTGG
CAAGCAGGAGGCCAAGAAGCCCGCTGCCAAGGCTCCCAAGAAGAAGATCG
AGGGCGCTGCTCTGATCGGTATCGATGTCGCCAAGGAGGAGGACTTCCCT
GGTTGGTACCAGCAGGTTCTGACCAAGGGTGATATGCTTGACTACTATGA
TGTTTCCGGATGCTTCATTCTCAAGGTGGGTTGTTCTGTTCGCCCGAGAC
GCCGTCAACCACTTGTACTGATATGCGACAGCCCGCTTCGTACTTCATCT
GGGAGGAGATCCAGCAGTGGTTCAACAGTTACATCAAGAAGATGGGCGTC
AAGAACTGCTCTTTCCCCCTTTTCGTGTCTGAGGATGTGCTGCAGAGGGA
GAAGGACCACATCGAGGGCTTTGCTGCTGAGGTCGCTTGGGTGACACACG
CGTATGTTCCCTTATCTCTAGGGACGCCCCCAATATAGACAGGCCACTGA
TAAACCCATCCCTGCTACAGTGGCTCCACCCCTCTGGAGAAGAAGATCGC
TATCCGTCCCACGTCGGAGACTGTCATGTACCCCTACTACGCCAAGTGGA
TCAGAAGTCACCGTGACTTGCCCCTCAAGCTCAACCAGTGGAACTCCGTC
GTCCGTTGGGAGTTCAAGCACCCCCAGCCTTTCCTCAGAACTAGAGAGTT
CCTGTGGCAGGAGGGCCACACGGCCCACCTGACCAAGGAGGGTGCCCACG
AAGAGGTTATGACAATCCTCGACCTCTATGCTCGTATCTACGAGGAACTT
CTGGCCGTCCCCGTCGTCAAGGGTCAGAAGACCGAGAAGGAGAAGTTCGC
CGGAGGTCTCTACACCACCACCGTTGAGGGCTACATCCCCGCCACCGGTC
GTGGTATCCAGGGTGGTACCTCCCACGGTCTGGGCCAGAACTTCAGTAAG
ATGTTCGGTATCACCGTCGAGGACCCCACCGCCAAGAGCGACGACAAGGA
GAAGGCGGCTCCTCTCCACGTGTGGCAGAACTCCTGGGGTCTGTCGACCC
GTACCCTCGGTGTCATGGTCATGATCCACAGTGACAACCGCGGTCTCGTC
CTTCCTCCTCGTGTCGCTGACACCCAGACCATCATCGTCCCCGTCGGTAT
CACCGCCAAGACCACCGATGAGGAGCGTAAGAAGCTCTACGACGAGGTCG
ACCGCCTCGTTTCCACTCTTCGCGAGGCTGGCGTCCGCGCTGAGAGCGAT
CTGAGAGAGGGGTACTCCCCTGGCTGGAAGTTCAACGAGTGGGAACTCCG
TGGTGTTCCTCTGCGTCTTGAGTTCGGTCCTGGCGAGCTTGCCGGCGGCT
TCGTCACCGCTGCTCGTCGTGACGTCCCCGGCAAGGACGGTAAGGCTCCC
ATTCAGATCTCCGAGTTGACCACCGCCGTGCCCGCTCTCCTGGAAACCAT
CCAGAAGGATCTGTACAACCGCGCCGACGCCGAGTACCGCTCCCACCGCA
AGATCATCACCAACTGGGACGACTTCACCCCGGCCCTGAACGACAAGAAC
GTCTGCCTGATCCCCCACTGCTTGACCGAGGAGTGTGAGGACCAGATCAA
GGACCTGAGTGCCCGCAAGCACGAGGAGGACTCCGGCATTCCCCAGGACG
CTCGCGCTCCTAGCATGGGTGCCAAGTCTCTCTGCATTCCCTTCGACCAG
CCCGAGGGTATCGTTCCCGGCCAGACCAAGTGTACCAACCCCCACTGCAC
CCGCTTCGCTGAGAAGTGGTGCATGTTCGGCCGTAAGTTCATATCCAGAT
TCCTTGCGTTGCTTACCTACAATATATCTAACATAACCATCTCAACAGGC
TCGTACTAAACGCAATCTACTACTACCGTGTTGGATCCGGATGTTTCAAT
TTATTAAAATTCTTTCTATCATCCACTTTCCTTCCTTCCTATGACTGTTA
TGACTTTTCCATTCCTGCCAATACAGTTTCACGTTGAGTTCGACATAGGG
ACCCTAAAAAGAAGCCTACAAGCGTCTTCAGAAAAGAAAAAGAACAAAAA
AGAACAAGTGAAATTCAGGAGTTTAGATGCATACAATTGCATGGATGATG
CGAGTTGGGTGGGGCAGATATGATATTCCTTGAGATACCTTTCATCGGTT
TACCATCGGGGGAGTCAGATATAGGTCGTTTCAGTAGCTAGCGAGTCGAA
TTGAAAGAACATGTTTTTGGCAATTG back to topCoding sequence (CDS) from alignment at ch3:4499154..4501579- >KJC3_004310-T1 ID=KJC3_004310-T1|Name=KJC3_004310-T1|organism=Aspergillus niger KJC3|type=CDS|length=7260bp|location=Sequence derived from alignment at ch3:4499154..4501579- (Aspergillus niger KJC3) GCTCGTACTAATGGCTCCACCCCTCTGGAGAAGAAGATCGCTATCCGTCC CACGTCGGAGACTGTCATGTACCCCTACTACGCCAAGTGGATCAGAAGTC ACCGTGACTTGCCCCTCAAGCTCAACCAGTGGAACTCCGTCGTCCGTTGG GAGTTCAAGCACCCCCAGCCTTTCCTCAGAACTAGAGAGTTCCTGTGGCA GGAGGGCCACACGGCCCACCTGACCAAGGAGGGTGCCCACGAAGAGGTTA TGACAATCCTCGACCTCTATGCTCGTATCTACGAGGAACTTCTGGCCGTC CCCGTCGTCAAGGGTCAGAAGACCGAGAAGGAGAAGTTCGCCGGAGGTCT CTACACCACCACCGTTGAGGGCTACATCCCCGCCACCGGTCGTGGTATCC AGGGTGGTACCTCCCACGGTCTGGGCCAGAACTTCAGTAAGATGTTCGGT ATCACCGTCGAGGACCCCACCGCCAAGAGCGACGACAAGGAGAAGGCGGC TCCTCTCCACGTGTGGCAGAACTCCTGGGGTCTGTCGACCCGTACCCTCG GTGTCATGGTCATGATCCACAGTGACAACCGCGGTCTCGTCCTTCCTCCT CGTGTCGCTGACACCCAGACCATCATCGTCCCCGTCGGTATCACCGCCAA GACCACCGATGAGGAGCGTAAGAAGCTCTACGACGAGGTCGACCGCCTCG TTTCCACTCTTCGCGAGGCTGGCGTCCGCGCTGAGAGCGATCTGAGAGAG GGGTACTCCCCTGGCTGGAAGTTCAACGAGTGGGAACTCCGTGGTGTTCC TCTGCGTCTTGAGTTCGGTCCTGGCGAGCTTGCCGGCGGCTTCGTCACCG CTGCTCGTCGTGACGTCCCCGGCAAGGACGGTAAGGCTCCCATTCAGATC TCCGAGTTGACCACCGCCGTGCCCGCTCTCCTGGAAACCATCCAGAAGGA TCTGTACAACCGCGCCGACGCCGAGTACCGCTCCCACCGCAAGATCATCA CCAACTGGGACGACTTCACCCCGGCCCTGAACGACAAGAACGTCTGCCTG ATCCCCCACTGCTTGACCGAGGAGTGTGAGGACCAGATCAAGGACCTGAG TGCCCGCAAGCACGAGGAGGACTCCGGCATTCCCCAGGACGCTCGCGCTC CTAGCATGGGTGCCAAGTCTCTCTGCATTCCCTTCGACCAGCCCGAGGGT ATCGTTCCCGGCCAGACCAAGTGTACCAACCCCCACTGCACCCGCTTCGC TGAGAAGTGGTGCATGTTCGGCCCCCGCTTCGTACTTCATCTGGGAGGAG ATCCAGCAGTGGTTCAACAGTTACATCAAGAAGATGGGCGTCAAGAACTG CTCTTTCCCCCTTTTCGTGTCTGAGGATGTGCTGCAGAGGGAGAAGGACC ACATCGAGGGCTTTGCTGCTGAGGTCGCTTGGGTGACACACGCATGGCAA GCCAAACCTCCGCTGACGCCGCGGCTCCTGTCGAGGCCCCTGCCCCCCAG ACCCTTCCTGATCGCTCCCAGAACCCCGCCGAAGCCGATGCCCCCCAGGG AGAGGTCTCCAAGAACGCCGCAAAGAAGGCTGCTAAGCTGGCCAAGCAGG CCGCCGACAAGGCTGAGAAGGCCGCGAACAAGGGGATTGGCAAGCAGGAG GCCAAGAAGCCCGCTGCCAAGGCTCCCAAGAAGAAGATCGAGGGCGCTGC TCTGATCGGTATCGATGTCGCCAAGGAGGAGGACTTCCCTGGTTGGTACC AGCAGGTTCTGACCAAGGGTGATATGCTTGACTACTATGATGTTTCCGGA TGCTTCATTCTCAAGGCTCGTACTAATGGCTCCACCCCTCTGGAGAAGAA GATCGCTATCCGTCCCACGTCGGAGACTGTCATGTACCCCTACTACGCCA AGTGGATCAGAAGTCACCGTGACTTGCCCCTCAAGCTCAACCAGTGGAAC TCCGTCGTCCGTTGGGAGTTCAAGCACCCCCAGCCTTTCCTCAGAACTAG AGAGTTCCTGTGGCAGGAGGGCCACACGGCCCACCTGACCAAGGAGGGTG CCCACGAAGAGGTTATGACAATCCTCGACCTCTATGCTCGTATCTACGAG GAACTTCTGGCCGTCCCCGTCGTCAAGGGTCAGAAGACCGAGAAGGAGAA GTTCGCCGGAGGTCTCTACACCACCACCGTTGAGGGCTACATCCCCGCCA CCGGTCGTGGTATCCAGGGTGGTACCTCCCACGGTCTGGGCCAGAACTTC AGTAAGATGTTCGGTATCACCGTCGAGGACCCCACCGCCAAGAGCGACGA CAAGGAGAAGGCGGCTCCTCTCCACGTGTGGCAGAACTCCTGGGGTCTGT CGACCCGTACCCTCGGTGTCATGGTCATGATCCACAGTGACAACCGCGGT CTCGTCCTTCCTCCTCGTGTCGCTGACACCCAGACCATCATCGTCCCCGT CGGTATCACCGCCAAGACCACCGATGAGGAGCGTAAGAAGCTCTACGACG AGGTCGACCGCCTCGTTTCCACTCTTCGCGAGGCTGGCGTCCGCGCTGAG AGCGATCTGAGAGAGGGGTACTCCCCTGGCTGGAAGTTCAACGAGTGGGA ACTCCGTGGTGTTCCTCTGCGTCTTGAGTTCGGTCCTGGCGAGCTTGCCG GCGGCTTCGTCACCGCTGCTCGTCGTGACGTCCCCGGCAAGGACGGTAAG GCTCCCATTCAGATCTCCGAGTTGACCACCGCCGTGCCCGCTCTCCTGGA AACCATCCAGAAGGATCTGTACAACCGCGCCGACGCCGAGTACCGCTCCC ACCGCAAGATCATCACCAACTGGGACGACTTCACCCCGGCCCTGAACGAC AAGAACGTCTGCCTGATCCCCCACTGCTTGACCGAGGAGTGTGAGGACCA GATCAAGGACCTGAGTGCCCGCAAGCACGAGGAGGACTCCGGCATTCCCC AGGACGCTCGCGCTCCTAGCATGGGTGCCAAGTCTCTCTGCATTCCCTTC GACCAGCCCGAGGGTATCGTTCCCGGCCAGACCAAGTGTACCAACCCCCA CTGCACCCGCTTCGCTGAGAAGTGGTGCATGTTCGGCCCCCGCTTCGTAC TTCATCTGGGAGGAGATCCAGCAGTGGTTCAACAGTTACATCAAGAAGAT GGGCGTCAAGAACTGCTCTTTCCCCCTTTTCGTGTCTGAGGATGTGCTGC AGAGGGAGAAGGACCACATCGAGGGCTTTGCTGCTGAGGTCGCTTGGGTG ACACACGCATGGCAAGCCAAACCTCCGCTGACGCCGCGGCTCCTGTCGAG GCCCCTGCCCCCCAGACCCTTCCTGATCGCTCCCAGAACCCCGCCGAAGC CGATGCCCCCCAGGGAGAGGTCTCCAAGAACGCCGCAAAGAAGGCTGCTA AGCTGGCCAAGCAGGCCGCCGACAAGGCTGAGAAGGCCGCGAACAAGGGG ATTGGCAAGCAGGAGGCCAAGAAGCCCGCTGCCAAGGCTCCCAAGAAGAA GATCGAGGGCGCTGCTCTGATCGGTATCGATGTCGCCAAGGAGGAGGACT TCCCTGGTTGGTACCAGCAGGTTCTGACCAAGGGTGATATGCTTGACTAC TATGATGTTTCCGGATGCTTCATTCTCAAGGCTCGTACTAATGGCTCCAC CCCTCTGGAGAAGAAGATCGCTATCCGTCCCACGTCGGAGACTGTCATGT ACCCCTACTACGCCAAGTGGATCAGAAGTCACCGTGACTTGCCCCTCAAG CTCAACCAGTGGAACTCCGTCGTCCGTTGGGAGTTCAAGCACCCCCAGCC TTTCCTCAGAACTAGAGAGTTCCTGTGGCAGGAGGGCCACACGGCCCACC TGACCAAGGAGGGTGCCCACGAAGAGGTTATGACAATCCTCGACCTCTAT GCTCGTATCTACGAGGAACTTCTGGCCGTCCCCGTCGTCAAGGGTCAGAA GACCGAGAAGGAGAAGTTCGCCGGAGGTCTCTACACCACCACCGTTGAGG GCTACATCCCCGCCACCGGTCGTGGTATCCAGGGTGGTACCTCCCACGGT CTGGGCCAGAACTTCAGTAAGATGTTCGGTATCACCGTCGAGGACCCCAC CGCCAAGAGCGACGACAAGGAGAAGGCGGCTCCTCTCCACGTGTGGCAGA ACTCCTGGGGTCTGTCGACCCGTACCCTCGGTGTCATGGTCATGATCCAC AGTGACAACCGCGGTCTCGTCCTTCCTCCTCGTGTCGCTGACACCCAGAC CATCATCGTCCCCGTCGGTATCACCGCCAAGACCACCGATGAGGAGCGTA AGAAGCTCTACGACGAGGTCGACCGCCTCGTTTCCACTCTTCGCGAGGCT GGCGTCCGCGCTGAGAGCGATCTGAGAGAGGGGTACTCCCCTGGCTGGAA GTTCAACGAGTGGGAACTCCGTGGTGTTCCTCTGCGTCTTGAGTTCGGTC CTGGCGAGCTTGCCGGCGGCTTCGTCACCGCTGCTCGTCGTGACGTCCCC GGCAAGGACGGTAAGGCTCCCATTCAGATCTCCGAGTTGACCACCGCCGT GCCCGCTCTCCTGGAAACCATCCAGAAGGATCTGTACAACCGCGCCGACG CCGAGTACCGCTCCCACCGCAAGATCATCACCAACTGGGACGACTTCACC CCGGCCCTGAACGACAAGAACGTCTGCCTGATCCCCCACTGCTTGACCGA GGAGTGTGAGGACCAGATCAAGGACCTGAGTGCCCGCAAGCACGAGGAGG ACTCCGGCATTCCCCAGGACGCTCGCGCTCCTAGCATGGGTGCCAAGTCT CTCTGCATTCCCTTCGACCAGCCCGAGGGTATCGTTCCCGGCCAGACCAA GTGTACCAACCCCCACTGCACCCGCTTCGCTGAGAAGTGGTGCATGTTCG GCCCCCGCTTCGTACTTCATCTGGGAGGAGATCCAGCAGTGGTTCAACAG TTACATCAAGAAGATGGGCGTCAAGAACTGCTCTTTCCCCCTTTTCGTGT CTGAGGATGTGCTGCAGAGGGAGAAGGACCACATCGAGGGCTTTGCTGCT GAGGTCGCTTGGGTGACACACGCATGGCAAGCCAAACCTCCGCTGACGCC GCGGCTCCTGTCGAGGCCCCTGCCCCCCAGACCCTTCCTGATCGCTCCCA GAACCCCGCCGAAGCCGATGCCCCCCAGGGAGAGGTCTCCAAGAACGCCG CAAAGAAGGCTGCTAAGCTGGCCAAGCAGGCCGCCGACAAGGCTGAGAAG GCCGCGAACAAGGGGATTGGCAAGCAGGAGGCCAAGAAGCCCGCTGCCAA GGCTCCCAAGAAGAAGATCGAGGGCGCTGCTCTGATCGGTATCGATGTCG CCAAGGAGGAGGACTTCCCTGGTTGGTACCAGCAGGTTCTGACCAAGGGT GATATGCTTGACTACTATGATGTTTCCGGATGCTTCATTCTCAAGGCTCG TACTAATGGCTCCACCCCTCTGGAGAAGAAGATCGCTATCCGTCCCACGT CGGAGACTGTCATGTACCCCTACTACGCCAAGTGGATCAGAAGTCACCGT GACTTGCCCCTCAAGCTCAACCAGTGGAACTCCGTCGTCCGTTGGGAGTT CAAGCACCCCCAGCCTTTCCTCAGAACTAGAGAGTTCCTGTGGCAGGAGG GCCACACGGCCCACCTGACCAAGGAGGGTGCCCACGAAGAGGTTATGACA ATCCTCGACCTCTATGCTCGTATCTACGAGGAACTTCTGGCCGTCCCCGT CGTCAAGGGTCAGAAGACCGAGAAGGAGAAGTTCGCCGGAGGTCTCTACA CCACCACCGTTGAGGGCTACATCCCCGCCACCGGTCGTGGTATCCAGGGT GGTACCTCCCACGGTCTGGGCCAGAACTTCAGTAAGATGTTCGGTATCAC CGTCGAGGACCCCACCGCCAAGAGCGACGACAAGGAGAAGGCGGCTCCTC TCCACGTGTGGCAGAACTCCTGGGGTCTGTCGACCCGTACCCTCGGTGTC ATGGTCATGATCCACAGTGACAACCGCGGTCTCGTCCTTCCTCCTCGTGT CGCTGACACCCAGACCATCATCGTCCCCGTCGGTATCACCGCCAAGACCA CCGATGAGGAGCGTAAGAAGCTCTACGACGAGGTCGACCGCCTCGTTTCC ACTCTTCGCGAGGCTGGCGTCCGCGCTGAGAGCGATCTGAGAGAGGGGTA CTCCCCTGGCTGGAAGTTCAACGAGTGGGAACTCCGTGGTGTTCCTCTGC GTCTTGAGTTCGGTCCTGGCGAGCTTGCCGGCGGCTTCGTCACCGCTGCT CGTCGTGACGTCCCCGGCAAGGACGGTAAGGCTCCCATTCAGATCTCCGA GTTGACCACCGCCGTGCCCGCTCTCCTGGAAACCATCCAGAAGGATCTGT ACAACCGCGCCGACGCCGAGTACCGCTCCCACCGCAAGATCATCACCAAC TGGGACGACTTCACCCCGGCCCTGAACGACAAGAACGTCTGCCTGATCCC CCACTGCTTGACCGAGGAGTGTGAGGACCAGATCAAGGACCTGAGTGCCC GCAAGCACGAGGAGGACTCCGGCATTCCCCAGGACGCTCGCGCTCCTAGC ATGGGTGCCAAGTCTCTCTGCATTCCCTTCGACCAGCCCGAGGGTATCGT TCCCGGCCAGACCAAGTGTACCAACCCCCACTGCACCCGCTTCGCTGAGA AGTGGTGCATGTTCGGCCCCCGCTTCGTACTTCATCTGGGAGGAGATCCA GCAGTGGTTCAACAGTTACATCAAGAAGATGGGCGTCAAGAACTGCTCTT TCCCCCTTTTCGTGTCTGAGGATGTGCTGCAGAGGGAGAAGGACCACATC GAGGGCTTTGCTGCTGAGGTCGCTTGGGTGACACACGCATGGCAAGCCAA ACCTCCGCTGACGCCGCGGCTCCTGTCGAGGCCCCTGCCCCCCAGACCCT TCCTGATCGCTCCCAGAACCCCGCCGAAGCCGATGCCCCCCAGGGAGAGG TCTCCAAGAACGCCGCAAAGAAGGCTGCTAAGCTGGCCAAGCAGGCCGCC GACAAGGCTGAGAAGGCCGCGAACAAGGGGATTGGCAAGCAGGAGGCCAA GAAGCCCGCTGCCAAGGCTCCCAAGAAGAAGATCGAGGGCGCTGCTCTGA TCGGTATCGATGTCGCCAAGGAGGAGGACTTCCCTGGTTGGTACCAGCAG GTTCTGACCAAGGGTGATATGCTTGACTACTATGATGTTTCCGGATGCTT CATTCTCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005737 | cytoplasm |
Vocabulary: Biological Process
Term | Definition |
GO:0006418 | tRNA aminoacylation for protein translation |
GO:0006433 | prolyl-tRNA aminoacylation |
Vocabulary: Molecular Function
Term | Definition |
GO:0004812 | aminoacyl-tRNA ligase activity |
GO:0000166 | nucleotide binding |
GO:0005524 | ATP binding |
GO:0004827 | proline-tRNA ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_004310-T1.utr3p1 | KJC3_004310-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_004310-T1.utr5p1 | KJC3_004310-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09261DHR |
DBxref | InterPro:IPR033721 |
DBxref | InterPro:IPR006195 |
DBxref | InterPro:IPR036621 |
DBxref | InterPro:IPR004499 |
DBxref | InterPro:IPR017449 |
DBxref | InterPro:IPR004154 |
DBxref | InterPro:IPR002314 |
DBxref | InterPro:IPR016061 |
DBxref | InterPro:IPR002316 |
DBxref | PFAM:PF00587 |
DBxref | PFAM:PF09180 |
DBxref | PFAM:PF03129 |
Product | ribose-phosphate pyrophosphokinase 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch3 | supercontig | ch3:4499154..4501579 - |
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