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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4636408..4638269- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004352-T1 ID=KJC3_004352-T1|Name=KJC3_004352-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1862bp|location=Sequence derived from alignment at ch3:4636408..4638269- (Aspergillus niger KJC3)
AATTCCTATCGGAGTCAAGCGTCAACAGATTCCAACGGCGCGGTCCAATA
GTGAAGAATACAAGATAGAAGATGGATGATTCACCTGGTGACGAGCATCT
TGCGTTTATGCAATGGGCCGAGGCGTCAGGGATCAAGATAAAGGGTGTCA
CGCCGGCACGATTCCCCGGGCGACGTTTGGGGATGAAGGCGACGCGAACA
ATAAAAGTAGGCTGCTGAGACTGTACTCCTTAGACTAGGAATGGGATATT
GTGGTGCATTGCTAATTTGCCCAGAACAATGAGATAATGCTCACCATTCC
CGTGGATCTAATGCTAACTATCGACTCTATCCCATCATCATTTACCTCGC
AATTTCCCTTGGGAACATCCATCCACGGGATCATGGCTGCGTTTCTCACA
CACGGGGACCCATCTCTTCTTAAGAACCTCGAGGCTTGGCGGAGTGTCTG
GCCCTCGTATGACGAGTTCGAAGACAGCATGCCTGTCCTATGGCCCGCGC
ATCTTCGGGTATCGAATTCTAGCTACGGAGGCAACGCTGACTCTTCCTCA
CCAGAGAAGCAAGATCAAGATCAAAATCGAGGAAAAGTCCTTCTCCCACC
CTCTATCTCAGGAGAATGGAACACTTTCCCCAAAGTCCCCGTAGGTGTGG
ACTACGACACACGATACCAGAACCTACTCAGCCAGCAAGAAAAGCGACTA
AAAGATGCCTGGGCAAATGTCGTCAAAGTCTATCCTGAGACAGAGTGGAA
GATGTTCGCCTATTACTGGTGCATTATCAATTCGAGGAGTTTCTATTATG
TGTCGCCTGGGAAAGATGAGCCAGAGGATTGGAATGATGCGATTGGAATG
GTCCCGTTTGCGGACTATTTTAATCATGTTGATGATGCGGTGGGTTTATC
CCTTTGTTTATGTACCATCTGTATAAGGGTGTGTGATATTGATTATATAC
AGGCATGCGAAGTCAATTTTGACGGAAAGAAGTATACTTTCCGAGCAACG
CGGCGATACGGTACTCTCTATCCCTTCCACACTATGAGTGCAGAGGACTA
ACACCATTCAGAGAAAGGCGAAGAAGTCTACATGAGCTATGGCAACCACT
CAAACGACTTCCTTTTAATTGAGTGTCAGTCTATAACCCTTCTATCAATC
CCAACATCCCATTCCCAATTCATTCAACTAACAGACAAAAGATGGTTTCA
CCCTCTCCACCAACCCCTCCGACTGCATCTACCTCGACGACATAATATTT
CAGGATCTCAGCATATCGCAGAAACAAGAATTAGCGAAACAGGAGATCTT
CGGGTGAGCATAACGACCCTCTTATTCATTTTTTCTCAACACCCTAGAAA
ACAACCATGTATCCGGATACGCAATACTAACTTAGCATACCAAAAGAAAC
TACACCCTCTCCCACCCCCTATCTTCCGAAAGTCCCCTGCGCTACGCCGC
ATGCTTAAAATACATGAACACCCGGGACTGGCGCGCATACGTATGCGGAC
GCTCAGAGCGGGGCGTCGACGAGCAGAAGACCGCGAACGTGATACGAGGC
TGGGTGGAGGTGTATCTTAAGGAATGCATTGGGACGATAGAAATTATTGA
GAATATGATTCAAGATCTTGGAGAAGAGATTGGGGATAGTGATAAGAAAA
TAGGATCAAAAGCATGGGAACGAGAGAAGCTGCAGATGTTGTTGGATAGA
TGGGGACAGATTAGACTGTTATGTGAGAGCGTTCTTGAAGACTTGGAATA
GTCTGCATATTACAGCTGCAATGATGGACCAGTTGGAAGGTCATGGCCAG
ACTTTCACATGACATACTCTGCATTGCACTTACATAGACATGGAAGAAAG
ACGTTCTCAAAT back to topCoding sequence (CDS) from alignment at ch3:4636408..4638269- >KJC3_004352-T1 ID=KJC3_004352-T1|Name=KJC3_004352-T1|organism=Aspergillus niger KJC3|type=CDS|length=8028bp|location=Sequence derived from alignment at ch3:4636408..4638269- (Aspergillus niger KJC3)
AAACTACACCCTCTCCCACCCCCTATCTTCCGAAAGTCCCCTGCGCTACG
CCGCATGCTTAAAATACATGAACACCCGGGACTGGCGCGCATACGTATGC
GGACGCTCAGAGCGGGGCGTCGACGAGCAGAAGACCGCGAACGTGATACG
AGGCTGGGTGGAGGTGTATCTTAAGGAATGCATTGGGACGATAGAAATTA
TTGAGAATATGATTCAAGATCTTGGAGAAGAGATTGGGGATAGTGATAAG
AAAATAGGATCAAAAGCATGGGAACGAGAGAAGCTGCAGATGTTGTTGGA
TAGATGGGGACAGATTAGACTGTTATGTGAGAGCGTTCTTGAAGACTTGG
AATAGATGGTTTCACCCTCTCCACCAACCCCTCCGACTGCATCTACCTCG
ACGACATAATATTTCAGGATCTCAGCATATCGCAGAAACAAGAATTAGCG
AAACAGGAGATCTTCGGAGAAAGGCGAAGAAGTCTACATGAGCTATGGCA
ACCACTCAAACGACTTCCTTTTAATTGAGTGCATGCGAAGTCAATTTTGA
CGGAAAGAAGTATACTTTCCGAGCAACGCGGCGATACGAACAATGAGATA
ATGCTCACCATTCCCGTGGATCTAATGCTAACTATCGACTCTATCCCATC
ATCATTTACCTCGCAATTTCCCTTGGGAACATCCATCCACGGGATCATGG
CTGCGTTTCTCACACACGGGGACCCATCTCTTCTTAAGAACCTCGAGGCT
TGGCGGAGTGTCTGGCCCTCGTATGACGAGTTCGAAGACAGCATGCCTGT
CCTATGGCCCGCGCATCTTCGGGTATCGAATTCTAGCTACGGAGGCAACG
CTGACTCTTCCTCACCAGAGAAGCAAGATCAAGATCAAAATCGAGGAAAA
GTCCTTCTCCCACCCTCTATCTCAGGAGAATGGAACACTTTCCCCAAAGT
CCCCGTAGGTGTGGACTACGACACACGATACCAGAACCTACTCAGCCAGC
AAGAAAAGCGACTAAAAGATGCCTGGGCAAATGTCGTCAAAGTCTATCCT
GAGACAGAGTGGAAGATGTTCGCCTATTACTGGTGCATTATCAATTCGAG
GAGTTTCTATTATGTGTCGCCTGGGAAAGATGAGCCAGAGGATTGGAATG
ATGCGATTGGAATGGTCCCGTTTGCGGACTATTTTAATCATGTTGATGAT
GCGATGGATGATTCACCTGGTGACGAGCATCTTGCGTTTATGCAATGGGC
CGAGGCGTCAGGGATCAAGATAAAGGGTGTCACGCCGGCACGATTCCCCG
GGCGACGTTTGGGGATGAAGGCGACGCGAACAATAAAAAAACTACACCCT
CTCCCACCCCCTATCTTCCGAAAGTCCCCTGCGCTACGCCGCATGCTTAA
AATACATGAACACCCGGGACTGGCGCGCATACGTATGCGGACGCTCAGAG
CGGGGCGTCGACGAGCAGAAGACCGCGAACGTGATACGAGGCTGGGTGGA
GGTGTATCTTAAGGAATGCATTGGGACGATAGAAATTATTGAGAATATGA
TTCAAGATCTTGGAGAAGAGATTGGGGATAGTGATAAGAAAATAGGATCA
AAAGCATGGGAACGAGAGAAGCTGCAGATGTTGTTGGATAGATGGGGACA
GATTAGACTGTTATGTGAGAGCGTTCTTGAAGACTTGGAATAGATGGTTT
CACCCTCTCCACCAACCCCTCCGACTGCATCTACCTCGACGACATAATAT
TTCAGGATCTCAGCATATCGCAGAAACAAGAATTAGCGAAACAGGAGATC
TTCGGAGAAAGGCGAAGAAGTCTACATGAGCTATGGCAACCACTCAAACG
ACTTCCTTTTAATTGAGTGCATGCGAAGTCAATTTTGACGGAAAGAAGTA
TACTTTCCGAGCAACGCGGCGATACGAACAATGAGATAATGCTCACCATT
CCCGTGGATCTAATGCTAACTATCGACTCTATCCCATCATCATTTACCTC
GCAATTTCCCTTGGGAACATCCATCCACGGGATCATGGCTGCGTTTCTCA
CACACGGGGACCCATCTCTTCTTAAGAACCTCGAGGCTTGGCGGAGTGTC
TGGCCCTCGTATGACGAGTTCGAAGACAGCATGCCTGTCCTATGGCCCGC
GCATCTTCGGGTATCGAATTCTAGCTACGGAGGCAACGCTGACTCTTCCT
CACCAGAGAAGCAAGATCAAGATCAAAATCGAGGAAAAGTCCTTCTCCCA
CCCTCTATCTCAGGAGAATGGAACACTTTCCCCAAAGTCCCCGTAGGTGT
GGACTACGACACACGATACCAGAACCTACTCAGCCAGCAAGAAAAGCGAC
TAAAAGATGCCTGGGCAAATGTCGTCAAAGTCTATCCTGAGACAGAGTGG
AAGATGTTCGCCTATTACTGGTGCATTATCAATTCGAGGAGTTTCTATTA
TGTGTCGCCTGGGAAAGATGAGCCAGAGGATTGGAATGATGCGATTGGAA
TGGTCCCGTTTGCGGACTATTTTAATCATGTTGATGATGCGATGGATGAT
TCACCTGGTGACGAGCATCTTGCGTTTATGCAATGGGCCGAGGCGTCAGG
GATCAAGATAAAGGGTGTCACGCCGGCACGATTCCCCGGGCGACGTTTGG
GGATGAAGGCGACGCGAACAATAAAAAAACTACACCCTCTCCCACCCCCT
ATCTTCCGAAAGTCCCCTGCGCTACGCCGCATGCTTAAAATACATGAACA
CCCGGGACTGGCGCGCATACGTATGCGGACGCTCAGAGCGGGGCGTCGAC
GAGCAGAAGACCGCGAACGTGATACGAGGCTGGGTGGAGGTGTATCTTAA
GGAATGCATTGGGACGATAGAAATTATTGAGAATATGATTCAAGATCTTG
GAGAAGAGATTGGGGATAGTGATAAGAAAATAGGATCAAAAGCATGGGAA
CGAGAGAAGCTGCAGATGTTGTTGGATAGATGGGGACAGATTAGACTGTT
ATGTGAGAGCGTTCTTGAAGACTTGGAATAGATGGTTTCACCCTCTCCAC
CAACCCCTCCGACTGCATCTACCTCGACGACATAATATTTCAGGATCTCA
GCATATCGCAGAAACAAGAATTAGCGAAACAGGAGATCTTCGGAGAAAGG
CGAAGAAGTCTACATGAGCTATGGCAACCACTCAAACGACTTCCTTTTAA
TTGAGTGCATGCGAAGTCAATTTTGACGGAAAGAAGTATACTTTCCGAGC
AACGCGGCGATACGAACAATGAGATAATGCTCACCATTCCCGTGGATCTA
ATGCTAACTATCGACTCTATCCCATCATCATTTACCTCGCAATTTCCCTT
GGGAACATCCATCCACGGGATCATGGCTGCGTTTCTCACACACGGGGACC
CATCTCTTCTTAAGAACCTCGAGGCTTGGCGGAGTGTCTGGCCCTCGTAT
GACGAGTTCGAAGACAGCATGCCTGTCCTATGGCCCGCGCATCTTCGGGT
ATCGAATTCTAGCTACGGAGGCAACGCTGACTCTTCCTCACCAGAGAAGC
AAGATCAAGATCAAAATCGAGGAAAAGTCCTTCTCCCACCCTCTATCTCA
GGAGAATGGAACACTTTCCCCAAAGTCCCCGTAGGTGTGGACTACGACAC
ACGATACCAGAACCTACTCAGCCAGCAAGAAAAGCGACTAAAAGATGCCT
GGGCAAATGTCGTCAAAGTCTATCCTGAGACAGAGTGGAAGATGTTCGCC
TATTACTGGTGCATTATCAATTCGAGGAGTTTCTATTATGTGTCGCCTGG
GAAAGATGAGCCAGAGGATTGGAATGATGCGATTGGAATGGTCCCGTTTG
CGGACTATTTTAATCATGTTGATGATGCGATGGATGATTCACCTGGTGAC
GAGCATCTTGCGTTTATGCAATGGGCCGAGGCGTCAGGGATCAAGATAAA
GGGTGTCACGCCGGCACGATTCCCCGGGCGACGTTTGGGGATGAAGGCGA
CGCGAACAATAAAAAAACTACACCCTCTCCCACCCCCTATCTTCCGAAAG
TCCCCTGCGCTACGCCGCATGCTTAAAATACATGAACACCCGGGACTGGC
GCGCATACGTATGCGGACGCTCAGAGCGGGGCGTCGACGAGCAGAAGACC
GCGAACGTGATACGAGGCTGGGTGGAGGTGTATCTTAAGGAATGCATTGG
GACGATAGAAATTATTGAGAATATGATTCAAGATCTTGGAGAAGAGATTG
GGGATAGTGATAAGAAAATAGGATCAAAAGCATGGGAACGAGAGAAGCTG
CAGATGTTGTTGGATAGATGGGGACAGATTAGACTGTTATGTGAGAGCGT
TCTTGAAGACTTGGAATAGATGGTTTCACCCTCTCCACCAACCCCTCCGA
CTGCATCTACCTCGACGACATAATATTTCAGGATCTCAGCATATCGCAGA
AACAAGAATTAGCGAAACAGGAGATCTTCGGAGAAAGGCGAAGAAGTCTA
CATGAGCTATGGCAACCACTCAAACGACTTCCTTTTAATTGAGTGCATGC
GAAGTCAATTTTGACGGAAAGAAGTATACTTTCCGAGCAACGCGGCGATA
CGAACAATGAGATAATGCTCACCATTCCCGTGGATCTAATGCTAACTATC
GACTCTATCCCATCATCATTTACCTCGCAATTTCCCTTGGGAACATCCAT
CCACGGGATCATGGCTGCGTTTCTCACACACGGGGACCCATCTCTTCTTA
AGAACCTCGAGGCTTGGCGGAGTGTCTGGCCCTCGTATGACGAGTTCGAA
GACAGCATGCCTGTCCTATGGCCCGCGCATCTTCGGGTATCGAATTCTAG
CTACGGAGGCAACGCTGACTCTTCCTCACCAGAGAAGCAAGATCAAGATC
AAAATCGAGGAAAAGTCCTTCTCCCACCCTCTATCTCAGGAGAATGGAAC
ACTTTCCCCAAAGTCCCCGTAGGTGTGGACTACGACACACGATACCAGAA
CCTACTCAGCCAGCAAGAAAAGCGACTAAAAGATGCCTGGGCAAATGTCG
TCAAAGTCTATCCTGAGACAGAGTGGAAGATGTTCGCCTATTACTGGTGC
ATTATCAATTCGAGGAGTTTCTATTATGTGTCGCCTGGGAAAGATGAGCC
AGAGGATTGGAATGATGCGATTGGAATGGTCCCGTTTGCGGACTATTTTA
ATCATGTTGATGATGCGATGGATGATTCACCTGGTGACGAGCATCTTGCG
TTTATGCAATGGGCCGAGGCGTCAGGGATCAAGATAAAGGGTGTCACGCC
GGCACGATTCCCCGGGCGACGTTTGGGGATGAAGGCGACGCGAACAATAA
AAAAACTACACCCTCTCCCACCCCCTATCTTCCGAAAGTCCCCTGCGCTA
CGCCGCATGCTTAAAATACATGAACACCCGGGACTGGCGCGCATACGTAT
GCGGACGCTCAGAGCGGGGCGTCGACGAGCAGAAGACCGCGAACGTGATA
CGAGGCTGGGTGGAGGTGTATCTTAAGGAATGCATTGGGACGATAGAAAT
TATTGAGAATATGATTCAAGATCTTGGAGAAGAGATTGGGGATAGTGATA
AGAAAATAGGATCAAAAGCATGGGAACGAGAGAAGCTGCAGATGTTGTTG
GATAGATGGGGACAGATTAGACTGTTATGTGAGAGCGTTCTTGAAGACTT
GGAATAGATGGTTTCACCCTCTCCACCAACCCCTCCGACTGCATCTACCT
CGACGACATAATATTTCAGGATCTCAGCATATCGCAGAAACAAGAATTAG
CGAAACAGGAGATCTTCGGAGAAAGGCGAAGAAGTCTACATGAGCTATGG
CAACCACTCAAACGACTTCCTTTTAATTGAGTGCATGCGAAGTCAATTTT
GACGGAAAGAAGTATACTTTCCGAGCAACGCGGCGATACGAACAATGAGA
TAATGCTCACCATTCCCGTGGATCTAATGCTAACTATCGACTCTATCCCA
TCATCATTTACCTCGCAATTTCCCTTGGGAACATCCATCCACGGGATCAT
GGCTGCGTTTCTCACACACGGGGACCCATCTCTTCTTAAGAACCTCGAGG
CTTGGCGGAGTGTCTGGCCCTCGTATGACGAGTTCGAAGACAGCATGCCT
GTCCTATGGCCCGCGCATCTTCGGGTATCGAATTCTAGCTACGGAGGCAA
CGCTGACTCTTCCTCACCAGAGAAGCAAGATCAAGATCAAAATCGAGGAA
AAGTCCTTCTCCCACCCTCTATCTCAGGAGAATGGAACACTTTCCCCAAA
GTCCCCGTAGGTGTGGACTACGACACACGATACCAGAACCTACTCAGCCA
GCAAGAAAAGCGACTAAAAGATGCCTGGGCAAATGTCGTCAAAGTCTATC
CTGAGACAGAGTGGAAGATGTTCGCCTATTACTGGTGCATTATCAATTCG
AGGAGTTTCTATTATGTGTCGCCTGGGAAAGATGAGCCAGAGGATTGGAA
TGATGCGATTGGAATGGTCCCGTTTGCGGACTATTTTAATCATGTTGATG
ATGCGATGGATGATTCACCTGGTGACGAGCATCTTGCGTTTATGCAATGG
GCCGAGGCGTCAGGGATCAAGATAAAGGGTGTCACGCCGGCACGATTCCC
CGGGCGACGTTTGGGGATGAAGGCGACGCGAACAATAAAAAAACTACACC
CTCTCCCACCCCCTATCTTCCGAAAGTCCCCTGCGCTACGCCGCATGCTT
AAAATACATGAACACCCGGGACTGGCGCGCATACGTATGCGGACGCTCAG
AGCGGGGCGTCGACGAGCAGAAGACCGCGAACGTGATACGAGGCTGGGTG
GAGGTGTATCTTAAGGAATGCATTGGGACGATAGAAATTATTGAGAATAT
GATTCAAGATCTTGGAGAAGAGATTGGGGATAGTGATAAGAAAATAGGAT
CAAAAGCATGGGAACGAGAGAAGCTGCAGATGTTGTTGGATAGATGGGGA
CAGATTAGACTGTTATGTGAGAGCGTTCTTGAAGACTTGGAATAGATGGT
TTCACCCTCTCCACCAACCCCTCCGACTGCATCTACCTCGACGACATAAT
ATTTCAGGATCTCAGCATATCGCAGAAACAAGAATTAGCGAAACAGGAGA
TCTTCGGAGAAAGGCGAAGAAGTCTACATGAGCTATGGCAACCACTCAAA
CGACTTCCTTTTAATTGAGTGCATGCGAAGTCAATTTTGACGGAAAGAAG
TATACTTTCCGAGCAACGCGGCGATACGAACAATGAGATAATGCTCACCA
TTCCCGTGGATCTAATGCTAACTATCGACTCTATCCCATCATCATTTACC
TCGCAATTTCCCTTGGGAACATCCATCCACGGGATCATGGCTGCGTTTCT
CACACACGGGGACCCATCTCTTCTTAAGAACCTCGAGGCTTGGCGGAGTG
TCTGGCCCTCGTATGACGAGTTCGAAGACAGCATGCCTGTCCTATGGCCC
GCGCATCTTCGGGTATCGAATTCTAGCTACGGAGGCAACGCTGACTCTTC
CTCACCAGAGAAGCAAGATCAAGATCAAAATCGAGGAAAAGTCCTTCTCC
CACCCTCTATCTCAGGAGAATGGAACACTTTCCCCAAAGTCCCCGTAGGT
GTGGACTACGACACACGATACCAGAACCTACTCAGCCAGCAAGAAAAGCG
ACTAAAAGATGCCTGGGCAAATGTCGTCAAAGTCTATCCTGAGACAGAGT
GGAAGATGTTCGCCTATTACTGGTGCATTATCAATTCGAGGAGTTTCTAT
TATGTGTCGCCTGGGAAAGATGAGCCAGAGGATTGGAATGATGCGATTGG
AATGGTCCCGTTTGCGGACTATTTTAATCATGTTGATGATGCGATGGATG
ATTCACCTGGTGACGAGCATCTTGCGTTTATGCAATGGGCCGAGGCGTCA
GGGATCAAGATAAAGGGTGTCACGCCGGCACGATTCCCCGGGCGACGTTT
GGGGATGAAGGCGACGCGAACAATAAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004352-T1.utr3p1 | KJC3_004352-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004352-T1.utr5p1 | KJC3_004352-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001214 |
| DBxref | PFAM:PF00856 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch3 | supercontig | ch3:4636408..4638269 - |
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