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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:19985..21331+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004526-T1 ID=KJC3_004526-T1|Name=KJC3_004526-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1347bp|location=Sequence derived from alignment at ch4:19985..21331+ (Aspergillus niger KJC3)
ATGACGGCCCACAAGATACAGGCCCAGGACAGTCAAAAGGCCATGTTCCA
CTTCTTCAAATCTGAGTGGTTCGACTTTGAGTTGGTGCGCCTACTGGGAT
TCGCTCCTTACGAGGGCGCGGAGATCGCCGAGGTGCTCCAGGCGGTGGGC
TCTATCCGAGACAGTGATGCAGAGAGCTGGCACACCGCATGGCTGCGTGC
AGGTAGCAAGACTGAAGCTTTGGCGCAAGAGGCCGAAGACCGGGGAGATC
GTCTCACGGCGCGTCGGGCGTACCTGCGCTCCTCCAACTATATCCGGGCG
GCGCAGTACATGCTCTCCAGCCGAAAGGGCCACATCGACCCGCGCGTGCT
GCCGACGCTGGAACGCGCTATCGCTAATTTTCGTCGCGCGACACAGCTGA
TGGATGGTGATGTGCACTGTCTAGAGATTCCCTACGAGAAGCACATTGCC
TTGCCCGGCTACCTGTATCTGCCCCCAGCCGAACGCAGGCTCTCCGACGG
CAAGATCCCCATCCTCATCAACATCGGTGGCGGCGACTCCACACAAGAAG
AATTGTACTTCATCAACCCAACCGCGGGGGTTCAGCAGGGATATGCAGTT
CTGACCTACGAGGGGCCGGGCCAGGGAATCCTTCTGCGACGTGAGGGACT
GACGATGCGACCGGATTGGGAGGTGGTCAATGGTAAGGTGCTGGACTTTC
TGGAAGTGTATGCACGGGAGCATCCCGCGTTGGATCTGGACCTCGACCGG
ATTGGCGTCTGTGGCGCTTCAATGGGGGGTTACTTTGCGCTGCGAGCGGC
GGCCGATACGCGGGTCAAGGCGTGCATTTCCATCGACCCATTTTACTGCA
TGTGGGACATCATGAAGGGGCGCATGCCCGAGTATCTCATCCACATGTTT
GAGACAGACCAGGGCTGCGCGCCTGACAGCTTCTTCAACGGGCTGGTACG
GTTCCTCCAGTGGGCTAACTTCCAGGCTCGTTGGGAGTTCAATCACCTCA
AGACCATCTTCGGGGTAGAGGCTCCCTCCGACGCTTTCCGCGCCATGATG
ACCTACACGCTCAGTCGGAGCGACGAGAAGGAGTACCTCGCTGACGTTCA
CTGCCCCGTGTTCGTCACCGGCGCCGCCGCCGCCCTCTACGCAAAGCCCG
AGTTCAGCACGGACCGCATCTACAACGCCCTCGGCCATCTCCGTGACCAG
GACAAGCTCAAGTGGATTGCCGCCGATGCAGCTCAGGGCGGGTTGCAGGC
GAAGGTCGGAGCCTTTGGTCTTTCTGCTCATCGAACATTTGCCTGGTTGG
ATCAGCATTTCGGGATCGACCGCAAGATTGCATACAAGCCGAATTAG back to topCoding sequence (CDS) from alignment at ch4:19985..21331+ >KJC3_004526-T1 ID=KJC3_004526-T1|Name=KJC3_004526-T1|organism=Aspergillus niger KJC3|type=CDS|length=1347bp|location=Sequence derived from alignment at ch4:19985..21331+ (Aspergillus niger KJC3)
ATGACGGCCCACAAGATACAGGCCCAGGACAGTCAAAAGGCCATGTTCCA
CTTCTTCAAATCTGAGTGGTTCGACTTTGAGTTGGTGCGCCTACTGGGAT
TCGCTCCTTACGAGGGCGCGGAGATCGCCGAGGTGCTCCAGGCGGTGGGC
TCTATCCGAGACAGTGATGCAGAGAGCTGGCACACCGCATGGCTGCGTGC
AGGTAGCAAGACTGAAGCTTTGGCGCAAGAGGCCGAAGACCGGGGAGATC
GTCTCACGGCGCGTCGGGCGTACCTGCGCTCCTCCAACTATATCCGGGCG
GCGCAGTACATGCTCTCCAGCCGAAAGGGCCACATCGACCCGCGCGTGCT
GCCGACGCTGGAACGCGCTATCGCTAATTTTCGTCGCGCGACACAGCTGA
TGGATGGTGATGTGCACTGTCTAGAGATTCCCTACGAGAAGCACATTGCC
TTGCCCGGCTACCTGTATCTGCCCCCAGCCGAACGCAGGCTCTCCGACGG
CAAGATCCCCATCCTCATCAACATCGGTGGCGGCGACTCCACACAAGAAG
AATTGTACTTCATCAACCCAACCGCGGGGGTTCAGCAGGGATATGCAGTT
CTGACCTACGAGGGGCCGGGCCAGGGAATCCTTCTGCGACGTGAGGGACT
GACGATGCGACCGGATTGGGAGGTGGTCAATGGTAAGGTGCTGGACTTTC
TGGAAGTGTATGCACGGGAGCATCCCGCGTTGGATCTGGACCTCGACCGG
ATTGGCGTCTGTGGCGCTTCAATGGGGGGTTACTTTGCGCTGCGAGCGGC
GGCCGATACGCGGGTCAAGGCGTGCATTTCCATCGACCCATTTTACTGCA
TGTGGGACATCATGAAGGGGCGCATGCCCGAGTATCTCATCCACATGTTT
GAGACAGACCAGGGCTGCGCGCCTGACAGCTTCTTCAACGGGCTGGTACG
GTTCCTCCAGTGGGCTAACTTCCAGGCTCGTTGGGAGTTCAATCACCTCA
AGACCATCTTCGGGGTAGAGGCTCCCTCCGACGCTTTCCGCGCCATGATG
ACCTACACGCTCAGTCGGAGCGACGAGAAGGAGTACCTCGCTGACGTTCA
CTGCCCCGTGTTCGTCACCGGCGCCGCCGCCGCCCTCTACGCAAAGCCCG
AGTTCAGCACGGACCGCATCTACAACGCCCTCGGCCATCTCCGTGACCAG
GACAAGCTCAAGTGGATTGCCGCCGATGCAGCTCAGGGCGGGTTGCAGGC
GAAGGTCGGAGCCTTTGGTCTTTCTGCTCATCGAACATTTGCCTGGTTGG
ATCAGCATTTCGGGATCGACCGCAAGATTGCATACAAGCCGAATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.1 |
| Note | antiSMASH:Cluster_4.2 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF06500 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:19985..21331 + |
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